Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-106 389.8 261 100.0
Nitab4.5_0005327g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-83 313.9 274 85.4
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-82 310.1 261 74.7
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-81 307.0 271 74.2
Nitab4.5_0001333g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.4e-80 302.4 252 88.5
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.6e-77 292.0 253 86.6
Nitab4.5_0026777g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-75 287.3 256 85.5
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.1e-73 277.7 255 83.9
Nitab4.5_0004968g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-72 277.3 252 84.1
Nitab4.5_0000127g0130 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-71 273.9 247 68.8
Nitab4.5_0000520g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.0e-71 271.9 247 79.4
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.4e-70 267.7 240 86.7
Nitab4.5_0001507g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-69 266.2 270 68.1
Nitab4.5_0006834g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-68 263.5 249 81.5
Nitab4.5_0006018g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-62 243.4 244 79.1
Nitab4.5_0013419g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.7e-59 231.9 265 52.8
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-55 219.9 132 84.1
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.9e-55 219.5 132 84.1
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.5e-55 218.4 132 84.8
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.1e-53 213.4 132 82.6
Nitab4.5_0000197g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-53 213.0 132 83.3
Nitab4.5_0001650g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.6e-53 212.6 225 73.8
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.3e-52 209.9 132 81.1
Nitab4.5_0009338g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-48 196.8 127 78.7
Nitab4.5_0000144g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-47 194.5 194 77.3
Nitab4.5_0003987g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.3e-44 183.3 122 76.2
Nitab4.5_0009681g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.9e-39 166.4 176 69.9
Nitab4.5_0002330g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.8e-39 166.0 192 67.7
Nitab4.5_0003780g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.5e-38 161.4 173 72.3
Nitab4.5_0001162g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-36 157.9 210 62.9
Nitab4.5_0000023g0750 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.9e-36 154.8 233 43.8
Nitab4.5_0004758g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.2e-33 144.8 203 58.1
Nitab4.5_0002710g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.0e-31 139.0 80 88.8
Nitab4.5_0001474g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.6e-31 138.7 187 65.2
Nitab4.5_0000485g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.6e-30 135.6 82 79.3
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.7e-29 132.5 107 63.6
Nitab4.5_0004704g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.2e-29 132.1 235 39.1
Nitab4.5_0000909g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-28 131.0 70 90.0
Nitab4.5_0003998g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-27 127.1 257 48.2
Nitab4.5_0008256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-25 121.3 229 48.9
Nitab4.5_0013343g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-25 120.6 65 90.8
Nitab4.5_0000309g0260 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-24 117.1 72 79.2
Nitab4.5_0000485g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.7e-23 114.0 87 70.1
Nitab4.5_0002145g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.3e-22 109.4 65 83.1
Nitab4.5_0000620g0250 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.3e-22 108.6 65 83.1
Nitab4.5_0007824g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.6e-21 106.3 65 81.5
Nitab4.5_0002628g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-20 104.8 233 40.8
Nitab4.5_0001151g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.5e-14 83.6 65 64.6
Nitab4.5_0004779g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.5e-14 83.6 194 34.0
Nitab4.5_0001772g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.6e-14 82.4 87 56.3
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.6e-14 82.4 302 43.7
Nitab4.5_0004505g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-13 81.3 69 55.1
Nitab4.5_0007325g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-13 81.3 197 32.5
Nitab4.5_0004340g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.1e-13 78.6 172 40.7
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 4.0e-12 76.3 273 30.8
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.2e-12 75.9 291 27.1
Nitab4.5_0000216g0350 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.8e-11 72.4 64 59.4
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-11 72.4 96 42.7
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 7.6e-11 72.0 96 42.7
Nitab4.5_0000779g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.9e-11 71.6 173 38.7
Nitab4.5_0004670g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-10 70.5 173 32.4
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.9e-10 70.1 263 30.8
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 2.9e-10 70.1 98 41.8
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.8e-10 69.7 256 36.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-10 69.7 94 42.6
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.8e-10 69.7 97 43.3
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.9e-10 69.3 105 42.9
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-10 68.9 97 42.3
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 8.4e-10 68.6 263 35.7
Nitab4.5_0004174g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.2e-09 66.6 43 74.4
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.2e-09 66.6 98 37.8
Nitab4.5_0009386g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.1e-09 65.5 177 40.1
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.2e-08 64.7 105 41.0
Nitab4.5_0006241g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-08 64.3 121 37.2
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 1.6e-08 64.3 98 39.8
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 2.7e-08 63.5 105 39.0
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 2.7e-08 63.5 97 40.2
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.5e-08 63.2 275 27.6
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 6.0e-08 62.4 254 34.6
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.0e-07 61.6 254 33.1
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 1.0e-07 61.6 268 26.1
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 3.0e-07 60.1 297 27.9
Nitab4.5_0006105g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.9e-07 59.7 271 24.7
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 6.6e-07 58.9 96 37.5
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 6.6e-07 58.9 96 37.5
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.4
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.4
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 6.6e-07 58.9 296 28.4
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.4
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.4
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.7
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.4
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-07 58.9 296 28.4
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 8.6e-07 58.5 96 36.5
Peaxi162Scf00291g00046 Petunia axillaris HOM05D000017 ORTHO05D001349 8.6e-07 58.5 100 35.0
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 8.6e-07 58.5 96 36.5
Peaxi162Scf00937g00313 Petunia axillaris HOM05D000017 ORTHO05D001349 8.6e-07 58.5 100 34.0
Peaxi162Scf00092g00032 Petunia axillaris HOM05D000017 ORTHO05D000372 1.1e-06 58.2 100 34.0
Peaxi162Scf00157g01537 Petunia axillaris HOM05D000017 ORTHO05D001349 1.1e-06 58.2 100 34.0
Peaxi162Scf00505g00213 Petunia axillaris HOM05D000017 ORTHO05D001349 1.1e-06 58.2 100 34.0
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.9e-06 57.4 124 31.5
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.9e-06 57.4 114 40.4
Nitab4.5_0008075g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.5e-06 57.0 256 22.7
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-06 57.0 256 30.5
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-06 57.0 256 30.5
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.3e-06 56.6 119 32.8
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 3.3e-06 56.6 96 35.4
Peaxi162Scf00087g00098 Petunia axillaris HOM05D006921 ORTHO05D009185 3.3e-06 56.6 96 34.4
Peaxi162Scf00089g00005 Petunia axillaris HOM05D000017 ORTHO05D001349 3.3e-06 56.6 132 31.8
Peaxi162Scf00256g00811 Petunia axillaris HOM05D000017 ORTHO05D001349 4.3e-06 56.2 117 30.8
Nitab4.5_0002403g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.6e-06 55.8 114 33.3
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-06 55.8 296 27.7
Nitab4.5_0003470g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.3e-06 55.5 114 35.1
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 7.3e-06 55.5 95 35.8
Nitab4.5_0000309g0360 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.6e-06 55.1 99 36.4
Peaxi162Scf00006g00342 Petunia axillaris HOM05D000017 ORTHO05D001349 9.6e-06 55.1 102 31.4
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.1 242 29.3
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.6e-06 55.1 94 31.9


User provided reference genes

Program Settings