Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.6e-84 315.5 172 100.0
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.4e-60 235.0 173 80.3
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.9e-58 229.6 174 80.5
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 1.6e-54 216.5 182 71.4
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.1e-54 216.1 180 70.6
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 6.2e-54 214.5 159 80.5
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 4.9e-51 204.9 182 67.6
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.4e-50 203.4 180 68.3
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.9e-50 203.0 179 64.2
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 9.6e-47 190.7 170 67.1
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 4.8e-46 188.3 187 61.0
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.1e-45 187.2 172 67.4
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 2.4e-45 186.0 188 63.3
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 9.9e-44 180.6 193 59.1
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 9.9e-44 180.6 174 65.5
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 6.4e-43 177.9 176 63.6
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 3.0e-40 169.1 249 49.0
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 1.8e-29 133.3 168 54.8
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 6.1e-25 118.2 165 46.7
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 8.7e-24 114.4 161 47.8
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 1.5e-23 113.6 171 47.4
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.4e-20 102.4 169 45.0
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 6.7e-16 88.2 166 40.4
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 1.5e-15 87.0 164 37.8
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 4.8e-14 82.0 161 42.2
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 1.8e-13 80.1 183 34.4
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 6.9e-13 78.2 174 39.7
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 9.1e-13 77.8 169 36.1
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 9.1e-13 77.8 164 38.4
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.2e-12 77.4 164 33.5
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.2e-12 77.4 164 35.4
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 1.5e-12 77.0 164 32.9
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.5e-12 77.0 164 37.8
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.0e-12 76.6 164 34.8
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.0e-12 76.6 164 34.8
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 2.0e-12 76.6 165 37.6
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 3.4e-12 75.9 164 38.4
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 4.5e-12 75.5 183 37.7
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.5e-12 75.5 164 33.5
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 5.9e-12 75.1 164 36.0
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 1.0e-11 74.3 170 37.6
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.0e-11 74.3 164 36.6
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 1.3e-11 73.9 162 35.2
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.7e-11 73.6 180 35.0
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 2.2e-11 73.2 164 36.0
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 3.8e-11 72.4 166 37.3
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 3.8e-11 72.4 155 38.7
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 3.8e-11 72.4 189 32.3
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 3.8e-11 72.4 168 35.7
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 2.5e-10 69.7 170 35.3
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 3.2e-10 69.3 183 36.1
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 3.2e-10 69.3 166 36.7
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.2e-10 68.9 164 36.0
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 5.5e-10 68.6 162 32.1
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 7.2e-10 68.2 166 34.3
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.2e-09 67.4 167 33.5
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 1.6e-09 67.0 167 35.3
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 2.1e-09 66.6 162 32.7
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.1e-09 66.6 165 35.2
Oeu021446.1 Olea europaea HOM05D005432 ORTHO05D004599 2.7e-09 66.2 155 36.8
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 4.7e-09 65.5 164 33.5
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 4.7e-09 65.5 173 34.7
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 4.7e-09 65.5 175 33.1
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 6.1e-09 65.1 75 48.0
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 8.0e-09 64.7 172 33.7
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 8.0e-09 64.7 172 33.7
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.8e-08 63.5 189 32.8
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 1.8e-08 63.5 172 32.0
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.8e-08 63.5 172 32.0
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.1e-07 60.8 172 32.0
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.5e-07 60.5 161 34.2
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 2.6e-07 59.7 164 32.9
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.6e-07 59.7 156 33.3
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 5.7e-07 58.5 111 36.9
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 9.7e-07 57.8 105 35.2
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 9.7e-07 57.8 79 41.8
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 9.7e-07 57.8 170 30.6
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 1.7e-06 57.0 75 42.7
CsaV3_6G044250 Cucumis sativus L. HOM05D005432 ORTHO05D004599 4.8e-06 55.5 168 32.1
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 4.8e-06 55.5 165 33.3
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 8.2e-06 54.7 35 65.7
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 8.2e-06 54.7 36 66.7
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 8.2e-06 54.7 160 35.0


User provided reference genes

Program Settings