Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.7e-112 409.5 226 100.0
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.9e-91 338.2 226 85.8
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 6.4e-91 337.8 228 78.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.7e-88 329.7 227 76.2
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.7e-88 329.7 227 76.2
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.8e-64 250.0 230 62.6
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 6.9e-61 238.0 231 58.4
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.2e-60 237.3 229 57.6
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 4.2e-58 228.8 225 56.4
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.2e-57 227.3 224 58.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.6e-57 226.9 228 55.3
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 4.6e-57 225.3 225 56.0
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 2.4e-53 213.0 227 52.9
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 7.6e-52 208.0 227 51.5
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.9e-51 206.1 233 52.8
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 5.5e-50 201.8 176 60.8
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.6e-49 200.3 227 51.1
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 8.7e-48 194.5 227 49.8
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 8.7e-48 194.5 228 53.5
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 8.7e-48 194.5 226 50.9
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.2e-46 189.9 227 48.0
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.8e-46 189.5 237 48.5
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.8e-45 186.8 230 49.6
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 4.1e-45 185.7 233 50.2
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 9.0e-45 184.5 226 48.2
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.2e-44 184.1 227 48.0
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 1.2e-44 184.1 229 48.9
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 1.5e-44 183.7 226 49.6
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 3.4e-44 182.6 225 47.1
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 5.9e-44 181.8 226 50.0
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 7.7e-44 181.4 232 47.8
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.0e-43 181.0 227 50.2
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.0e-43 181.0 232 48.3
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.7e-43 180.3 228 49.6
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.7e-43 180.3 227 48.0
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.7e-43 180.3 226 48.7
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 6.5e-43 178.3 228 49.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 6.5e-43 178.3 226 48.2
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.4e-42 177.2 232 46.6
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.4e-42 177.2 232 47.0
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 3.2e-42 176.0 228 46.9
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 5.5e-42 175.3 226 46.5
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 5.5e-42 175.3 226 47.8
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 9.4e-42 174.5 227 45.4
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.6e-41 173.7 229 48.0
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.1e-41 173.3 226 45.6
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 2.1e-41 173.3 229 47.6
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 4.6e-41 172.2 226 47.8
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 6.1e-41 171.8 226 47.8
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 1.0e-40 171.0 230 45.2
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.4e-40 170.6 179 52.5
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.4e-40 170.6 233 44.2
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 3.3e-39 166.0 255 43.9
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 3.3e-39 166.0 227 45.8
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.3e-39 165.6 281 41.6
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 5.7e-39 165.2 229 47.2
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.3e-38 164.1 236 44.1
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.3e-38 164.1 234 45.3
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 2.2e-38 163.3 226 46.0
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 6.3e-38 161.8 229 45.9
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.8e-37 160.2 228 43.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.4e-37 159.8 230 45.7
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 4.1e-37 159.1 226 43.8
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 5.9e-36 155.2 235 40.4
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 5.9e-36 155.2 235 40.4
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 5.9e-36 155.2 235 40.4
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 7.7e-36 154.8 230 42.2
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.0e-35 154.5 233 41.6
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.3e-35 154.1 189 48.7
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.7e-35 153.7 233 41.6
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.7e-35 153.7 173 52.0
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.2e-35 153.3 174 49.4
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 2.9e-35 152.9 227 39.6
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.9e-35 152.9 230 44.3
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 3.8e-35 152.5 236 38.6
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.8e-35 152.5 226 38.9
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 1.9e-34 150.2 226 42.9
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.5e-34 149.8 160 52.5
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 9.4e-34 147.9 227 39.6
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 2.7e-33 146.4 139 57.6
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 3.6e-33 146.0 232 41.8
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 3.0e-32 142.9 236 38.6
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 5.1e-32 142.1 178 44.9
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 6.7e-32 141.7 228 41.2
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.8e-32 141.4 233 41.6
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.6e-31 139.8 235 41.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 3.3e-31 139.4 234 38.5
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.4e-29 134.0 233 38.6
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 3.1e-29 132.9 233 38.2
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 7.0e-29 131.7 235 35.7
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 4.5e-28 129.0 228 39.0
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.3e-27 127.5 232 36.2
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.7e-27 127.1 117 60.7
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 2.2e-27 126.7 174 43.1
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.2e-25 120.9 124 50.8
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.1e-23 114.4 161 42.2
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.6e-23 113.2 117 50.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 6.3e-22 108.6 166 38.6
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 2.4e-21 106.7 228 36.0
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 8.5e-11 71.6 106 42.5
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.9e-10 70.5 94 42.6
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 2.5e-10 70.1 101 37.6
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.3e-08 63.5 128 36.7


User provided reference genes

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