Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-73 279.6 156 100.0
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-58 228.4 156 82.7
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-57 224.9 156 81.4
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-54 214.9 156 79.5
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-53 211.8 156 76.9
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-51 206.5 156 77.6
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-51 204.9 156 75.6
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-46 189.9 156 70.5
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-45 185.7 156 70.5
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-41 172.9 119 84.0
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-40 169.5 156 64.7
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-39 166.4 121 80.2
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-39 166.4 136 74.3
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-39 165.2 156 64.7
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-38 161.4 127 75.6
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.2e-37 157.5 156 61.5
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-36 157.1 105 86.7
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-36 156.8 156 60.3
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-36 154.5 156 64.1
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-36 154.1 106 84.9
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-35 153.3 105 84.8
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.9e-35 151.4 105 84.8
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.7e-35 151.0 148 64.9
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.5e-34 147.9 100 86.0
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 8.5e-34 147.5 157 59.9
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-33 147.1 156 60.3
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-33 146.7 124 71.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.5e-33 146.0 156 55.1
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.5e-33 146.0 156 53.8
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.2e-33 145.2 151 55.0
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.2e-33 145.2 156 54.5
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.1e-32 142.9 156 58.3
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-32 142.5 103 80.6
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 6.1e-32 141.4 156 53.2
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.4e-31 140.2 156 52.6
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.8e-31 139.8 156 52.6
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-31 139.0 145 62.1
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-31 138.7 154 57.8
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-31 138.7 105 81.0
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 2.5e-30 136.0 156 51.3
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-29 133.7 101 76.2
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-28 130.6 127 62.2
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-28 129.4 91 84.6
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-28 128.6 156 55.1
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 5.3e-28 128.3 143 51.7
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-28 127.9 91 82.4
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-27 127.1 133 55.6
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-27 126.7 95 75.8
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-27 125.6 84 85.7
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-26 123.6 84 85.7
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-26 122.9 156 53.8
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-26 122.1 79 89.9
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 6.5e-26 121.3 151 51.0
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-25 119.4 98 76.5
Nitab4.5_0007326g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-25 118.2 118 63.6
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-24 116.7 87 80.5
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-23 112.5 102 69.6
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.5e-22 110.2 95 72.6
Nitab4.5_0000481g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-21 105.9 110 57.3
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-20 103.6 114 53.5
Nitab4.5_0005263g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-20 103.2 124 55.6
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-20 102.8 66 86.4
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 5.3e-20 101.7 70 81.4
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-19 100.1 76 77.6
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 5.9e-19 98.2 107 53.3
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-18 97.4 67 79.1
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-18 97.4 73 76.7
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 1.3e-18 97.1 121 47.1
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-18 96.7 112 51.8
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-17 93.6 150 42.7
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.9e-17 93.2 92 59.8
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-17 91.7 150 40.0
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.1e-16 89.7 62 80.6
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 4.7e-16 88.6 150 38.7
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-16 87.8 58 87.9
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-15 86.3 150 38.7
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-15 85.9 150 39.3
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-15 85.1 148 41.2
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-15 84.7 150 38.7
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-15 84.3 54 87.0
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-14 82.8 151 39.7
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-14 82.4 150 38.7
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-14 82.4 149 40.3
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-14 81.6 150 38.7
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-14 81.6 150 38.0
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-13 79.0 148 37.2
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-13 79.0 150 37.3
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-13 78.6 149 36.2
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-12 77.4 150 36.7
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-12 77.0 87 51.7
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-12 76.6 148 36.5
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-12 76.3 144 36.8
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.9 141 36.9
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.9 150 36.0
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.9 151 37.7
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-11 73.2 149 34.9
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-11 72.8 150 39.3
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 3.5e-11 72.4 148 38.5
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-11 72.0 150 36.7
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-11 71.6 152 34.9
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 5.9e-11 71.6 100 48.0
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-11 71.2 141 38.3
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-11 71.2 151 35.8
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-11 71.2 139 37.4
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 2.2e-10 69.7 149 36.2
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-10 69.7 139 37.4
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 5.0e-10 68.6 149 34.9
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-10 68.6 153 37.3
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 67.4 131 38.9
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.1e-09 67.4 150 34.0
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-09 67.0 150 34.0
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-09 66.6 145 35.9
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-09 66.2 151 35.8
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 3.2e-09 65.9 149 35.6
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-09 65.1 150 34.7
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-09 64.3 135 35.6
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-08 63.9 136 36.0
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-08 63.9 131 38.2
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.6e-08 63.5 135 35.6
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.6e-08 63.5 59 59.3
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-08 62.4 126 35.7
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-08 62.0 150 34.7
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-08 62.0 150 33.3
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-08 61.6 150 33.3
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-07 60.8 137 34.3
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.0e-07 60.8 150 34.7
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-07 60.5 119 38.7
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 60.1 150 32.7
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 60.1 150 32.7
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-07 59.7 151 35.1
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-07 59.3 121 38.0
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-07 58.5 150 31.3
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-07 57.8 150 31.3
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-06 57.4 149 32.2
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-06 57.4 136 33.8
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-06 56.6 151 35.1
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-06 56.6 135 34.8
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-06 56.2 134 32.8
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-06 56.2 78 41.0
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-06 55.8 150 31.3
Nitab4.5_0000864g0250 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.3e-06 55.8 122 40.2
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-06 55.8 127 35.4
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-06 55.5 126 33.3
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-06 55.5 144 33.3
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-06 54.3 150 32.7
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-06 54.3 120 35.8


User provided reference genes

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