Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.7e-182 641.3 312 100.0
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.8e-144 516.2 327 78.3
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 3.2e-141 505.4 310 80.3
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 7.4e-130 467.6 310 75.5
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.9e-125 453.0 247 90.7
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 1.4e-112 410.2 310 61.3
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 7.9e-108 394.4 329 59.0
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 1.4e-107 393.7 307 61.9
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.1e-104 384.0 294 62.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 7.0e-104 381.3 306 59.2
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 3.5e-103 379.0 210 86.7
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 4.5e-103 378.6 316 57.3
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 7.2e-101 371.3 312 57.1
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 2.1e-100 369.8 317 56.5
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.4e-99 367.1 301 57.5
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.5e-98 363.6 316 54.1
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 4.4e-98 362.1 312 56.4
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 5.7e-98 361.7 310 56.5
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 9.7e-98 360.9 321 54.8
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.1e-96 357.5 310 55.2
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.2e-95 354.0 313 55.0
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.6e-95 353.6 313 54.0
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 3.5e-95 352.4 314 55.7
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 3.5e-95 352.4 324 54.6
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 3.5e-95 352.4 297 56.6
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 7.7e-95 351.3 317 52.1
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 1.3e-94 350.5 304 54.3
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.7e-94 350.1 305 53.8
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 2.2e-94 349.7 285 56.5
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 2.2e-94 349.7 314 54.1
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 2.2e-94 349.7 318 53.5
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 2.9e-94 349.4 316 54.4
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 5.0e-94 348.6 313 54.6
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-93 347.4 292 55.5
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 1.1e-93 347.4 308 53.9
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.5e-93 346.3 314 53.8
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 5.5e-93 345.1 304 52.6
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 7.2e-93 344.7 327 51.1
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.2e-92 344.0 305 54.1
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 3.6e-92 342.4 316 53.5
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.4e-91 340.5 311 51.4
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 6.8e-91 338.2 313 53.0
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 3.4e-90 335.9 306 53.3
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 3.4e-90 335.9 309 55.3
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 4.4e-90 335.5 289 56.1
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.3e-89 334.0 289 54.7
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 1.7e-89 333.6 304 53.6
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 4.8e-89 332.0 289 55.7
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 8.3e-89 331.3 325 49.2
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 8.3e-89 331.3 327 50.8
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.1e-88 330.9 304 53.6
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-88 330.9 313 51.4
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.8e-88 330.1 309 54.0
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 2.4e-88 329.7 280 56.4
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 3.1e-88 329.3 235 65.1
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 7.0e-88 328.2 303 52.8
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.0e-88 328.2 299 52.8
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 9.1e-88 327.8 296 53.7
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 9.1e-88 327.8 329 49.8
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.7e-87 326.2 291 54.6
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 3.5e-87 325.9 296 55.4
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 7.7e-87 324.7 295 54.2
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 7.7e-87 324.7 295 52.5
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 2.9e-86 322.8 309 52.8
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 5.0e-86 322.0 300 53.3
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 1.1e-85 320.9 312 50.0
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 1.6e-84 317.0 279 54.8
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 3.6e-84 315.8 278 54.3
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 4.7e-84 315.5 455 40.4
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 4.0e-83 312.4 284 52.5
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 8.8e-83 311.2 294 52.7
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 8.8e-83 311.2 237 59.9
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 3.4e-82 309.3 301 48.8
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 1.4e-80 303.9 279 51.6
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 9.2e-80 301.2 297 49.8
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.2e-79 300.8 233 59.7
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 7.8e-79 298.1 269 54.3
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.0e-78 297.7 331 47.1
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 1.7e-78 297.0 283 50.9
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 2.9e-78 296.2 295 49.5
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.1e-77 294.3 237 56.5
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.5e-77 293.9 244 56.1
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 2.5e-77 293.1 268 54.9
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.3e-77 292.7 391 40.7
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 4.4e-74 282.3 333 46.5
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.8e-71 271.6 266 50.4
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 2.1e-68 263.5 350 43.4
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 1.0e-67 261.2 146 84.9
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 2.0e-66 256.9 298 42.3
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 7.8e-63 245.0 297 42.8
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.5e-61 240.7 202 61.4
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.1e-60 236.9 281 44.1
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 8.9e-59 231.5 231 52.8
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.5e-58 230.7 274 43.8
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.0e-54 218.0 174 59.8
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.3e-54 216.9 308 39.3
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 3.9e-54 216.1 307 39.1
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.6e-52 210.7 208 51.9
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 4.0e-51 206.1 202 51.0
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.0e-50 203.8 202 50.5
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 3.4e-50 203.0 145 64.8
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 7.1e-48 195.3 183 49.7
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 9.3e-40 168.3 127 58.3
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 8.7e-38 161.8 182 48.4
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 9.0e-35 151.8 104 59.6
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 2.2e-33 147.1 99 65.7
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 4.6e-31 139.4 306 29.7
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.2e-26 124.8 142 45.8
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 2.2e-25 120.6 84 58.3
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.1e-23 114.0 76 61.8
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 7.9e-23 112.1 76 63.2
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 7.4e-21 105.5 189 40.7
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 1.4e-16 91.3 334 27.2
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.7e-15 87.0 95 44.2
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 6.0e-15 85.9 259 27.4
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 2.6e-10 70.5 254 25.2
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 7.2e-08 62.4 44 59.1


User provided reference genes

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