Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000664g0240 Nicotiana tabacum HOM05D002558 ORTHO05D002768 3.2e-64 248.8 186 100.0
Nitab4.5_0001567g0160 Nicotiana tabacum HOM05D002558 ORTHO05D002768 3.7e-52 208.8 205 82.9
PGSC0003DMG400018583 Solanum tuberosum HOM05D002558 ORTHO05D002768 1.6e-47 193.4 206 69.4
Solyc11g071220.2 Solanum lycopersicum HOM05D002558 ORTHO05D002768 8.2e-44 181.0 207 69.1
Sopen11g028900 Solanum pennellii HOM05D002558 ORTHO05D002768 8.2e-44 181.0 207 69.1
CAN.G309.76 Capsicum annuum HOM05D002558 ORTHO05D002768 1.5e-37 160.2 211 73.9
Peaxi162Scf01204g00123 Petunia axillaris HOM05D002558 ORTHO05D002768 1.6e-31 140.2 259 51.0
Actinidia15737 Actinidia chinensis HOM05D002558 ORTHO05D002768 1.2e-23 114.0 213 46.0
Dinv27898 Davidia involucrata HOM05D002558 ORTHO05D002768 3.0e-22 109.4 158 58.9
Cfa013362 Carpinus fangiana HOM05D002558 ORTHO05D002768 5.7e-21 105.1 207 49.8
CANSAT25G1183 Cannabis sativa HOM05D002558 ORTHO05D002768 1.3e-20 104.0 170 57.6
Actinidia14672 Actinidia chinensis HOM05D002558 ORTHO05D002768 1.7e-20 103.6 166 53.0
Gohir.D08G271500 Gossypium hirsutum HOM05D002558 ORTHO05D002768 3.7e-20 102.4 205 47.3
SGA_v2.0_scaffold103G29960 Striga asiatica HOM05D002558 ORTHO05D002768 4.9e-20 102.1 206 43.7
Lsat_1_v5_gn_5_33620 Lactuca sativa HOM05D002558 ORTHO05D002768 6.3e-20 101.7 167 52.7
Gorai.004G289900 Gossypium raimondii HOM05D002558 ORTHO05D002768 1.1e-19 100.9 205 46.8
Gohir.A08G249984 Gossypium hirsutum HOM05D002558 ORTHO05D002768 1.8e-19 100.1 168 53.0
CSS0007775 Camellia sinensis var. sinensis HOM05D002558 ORTHO05D002768 2.4e-19 99.8 163 52.1
Ciclev10009557m.g Citrus clementina HOM05D002558 ORTHO05D002768 3.1e-19 99.4 205 49.3
MD08G1114400 Malus domestica HOM05D002558 ORTHO05D002768 5.4e-19 98.6 160 48.8
Migut.A00207 Erythranthe guttata HOM05D002558 ORTHO05D002768 9.2e-19 97.8 178 47.2
vmacro05369 Vaccinium macrocarpon HOM05D002558 ORTHO05D002768 1.6e-18 97.1 179 49.7
Cc08_g09510 Coffea canephora HOM05D002558 ORTHO05D002768 2.7e-18 96.3 181 45.3
CiPaw.07G204600 Carya illinoinensis HOM05D002558 ORTHO05D002768 3.5e-18 95.9 206 47.6
TWI63G0866 Tripterygium wilfordii HOM05D002558 ORTHO05D002768 4.5e-18 95.5 203 48.8
MD15G1093900 Malus domestica HOM05D002558 ORTHO05D002768 5.9e-18 95.1 197 44.2
TWI34G1326 Tripterygium wilfordii HOM05D002558 ORTHO05D002768 1.0e-17 94.4 200 45.0
FAN15G3002 Fragaria x ananassa HOM05D002558 ORTHO05D002768 1.3e-17 94.0 153 49.7
TAR626G0604 Trochodendron aralioides HOM05D002558 ORTHO05D002768 2.9e-17 92.8 169 45.0
Dinv14262 Davidia involucrata HOM05D000078 ORTHO05D002768 8.6e-17 91.3 151 55.6
FAN27G0094 Fragaria x ananassa HOM05D002558 ORTHO05D002768 8.6e-17 91.3 151 49.0
FAN20G1950 Fragaria x ananassa HOM05D002558 ORTHO05D002768 1.9e-16 90.1 148 49.3
HanXRQChr08g0234401 Helianthus annuus HOM05D002558 ORTHO05D002768 1.9e-16 90.1 162 44.4
FvH4_2g35630 Fragaria vesca HOM05D002558 ORTHO05D002768 5.6e-16 88.6 148 48.0
RcHm_v2.0_Chr6g0306181 Rosa chinensis HOM05D002558 ORTHO05D002768 1.6e-15 87.0 150 48.0
Gorai.010G107100 Gossypium raimondii HOM05D002558 ORTHO05D002768 3.6e-15 85.9 215 46.0
Duzib168G1844 Durio zibethinus HOM05D002558 ORTHO05D002768 6.1e-15 85.1 207 46.9
Thecc.09G044700 Theobroma cacao HOM05D002558 ORTHO05D002768 8.0e-15 84.7 207 41.5
Gohir.A06G093000 Gossypium hirsutum HOM05D002558 ORTHO05D002768 1.8e-14 83.6 168 48.2
Sc09g0009270 Simmondsia chinensis HOM05D002558 ORTHO05D002768 5.2e-14 82.0 177 41.2
Hund19519 Selenicereus undatus HOM05D002558 ORTHO05D002768 6.8e-14 81.6 164 50.0
Glyma.14G146200 Glycine max HOM05D002558 ORTHO05D002768 8.9e-14 81.3 156 50.6
Gohir.D06G092700 Gossypium hirsutum HOM05D002558 ORTHO05D002768 8.9e-14 81.3 166 47.6
Potri.018G043800 Populus trichocarpa HOM05D002558 ORTHO05D002768 8.9e-14 81.3 174 51.1
Glyma.17G194200 Glycine max HOM05D002558 ORTHO05D002768 2.6e-13 79.7 159 49.7
CSS0006160 Camellia sinensis var. sinensis HOM05D002558 ORTHO05D002768 4.4e-13 79.0 213 39.4
Phvul.009G109500 Phaseolus vulgaris HOM05D002558 ORTHO05D002768 4.4e-13 79.0 165 44.8
Sabra06G0186800 Salix brachista HOM05D002558 ORTHO05D002768 4.4e-13 79.0 164 50.6
SalBow4G0694 Salvia bowleyana HOM05D002558 ORTHO05D002768 9.8e-13 77.8 154 49.4
Carub.0006s1008 Capsella rubella HOM05D002558 ORTHO05D002768 1.3e-12 77.4 215 45.6
ECA246G0608 Erigeron canadensis HOM05D005233 ORTHO05D006308 1.7e-12 77.0 118 53.4
Potri.006G238800 Populus trichocarpa HOM05D002558 ORTHO05D002768 1.7e-12 77.0 164 50.0
Ah.10g035040 Amaranthus hybridus HOM05D002558 ORTHO05D002768 2.2e-12 76.6 155 45.2
Glyma.06G085600 Glycine max HOM05D002558 ORTHO05D002768 2.2e-12 76.6 166 47.6
Prupe.1G448700 Prunus persica HOM05D002558 ORTHO05D002768 2.2e-12 76.6 164 48.8
A02p01100 Brassica napus HOM05D002558 ORTHO05D002768 2.9e-12 76.3 217 43.3
BraA02t05090Z Brassica rapa HOM05D002558 ORTHO05D002768 2.9e-12 76.3 217 43.3
PGR044G0927 Punica granatum HOM05D002558 ORTHO05D002768 2.9e-12 76.3 155 45.8
GSVIVG01035629001 Vitis vinifera HOM05D002558 ORTHO05D002768 2.9e-12 76.3 198 44.9
C02p05280 Brassica napus HOM05D002558 ORTHO05D002768 3.7e-12 75.9 218 44.5
BolC2t06476H Brassica oleracea HOM05D002558 ORTHO05D002768 3.7e-12 75.9 218 45.4
BcaNung01938 Brassica carinata HOM05D002558 ORTHO05D002768 6.4e-12 75.1 218 45.9
CiPaw.08G025400 Carya illinoinensis HOM05D002558 ORTHO05D002768 6.4e-12 75.1 230 53.5
Atru.chr7.2093 Acer truncatum HOM05D002558 ORTHO05D002768 1.1e-11 74.3 238 40.8
Atru.chr7.2107 Acer truncatum HOM05D002558 ORTHO05D002768 1.1e-11 74.3 239 41.4
MSTRG.25908 Avicennia marina HOM05D002558 ORTHO05D002768 1.1e-11 74.3 173 40.5
Ca_15596_v3 Cicer arietinum L. HOM05D002558 ORTHO05D002768 1.1e-11 74.3 173 44.5
THA.LOC104799194 Tarenaya hassleriana HOM05D002558 ORTHO05D002768 2.4e-11 73.2 224 43.8
BcaNung01939 Brassica carinata HOM05D002558 ORTHO05D002768 3.2e-11 72.8 220 46.4
Glyma.04G083900 Glycine max HOM05D002558 ORTHO05D002768 3.2e-11 72.8 213 43.2
Sp6g32015 Schrenkiella parvula HOM05D002558 ORTHO05D002768 3.2e-11 72.8 184 45.1
Lj1g0013926 Lotus japonicus HOM05D002558 ORTHO05D002768 4.1e-11 72.4 193 37.3
Sabra18G0043900 Salix brachista HOM05D002558 ORTHO05D002768 4.1e-11 72.4 211 44.1
QL12p041571 Quercus lobata HOM05D002558 ORTHO05D002768 9.2e-11 71.2 192 42.7
TAR383G0059 Trochodendron aralioides HOM05D002558 ORTHO05D002768 9.2e-11 71.2 170 40.6
unitig_0.g2573 Utricularia gibba HOM05D002558 ORTHO05D002768 1.2e-10 70.9 169 38.5
VMungo1309G0315 Vigna mungo HOM05D000191 ORTHO05D000122 1.2e-10 70.9 228 41.2
Manes.16G075900 Manihot esculenta HOM05D002558 ORTHO05D002768 2.0e-10 70.1 141 50.4
PSO210G0675 Papaver somniferum HOM05D002558 ORTHO05D002768 2.0e-10 70.1 189 40.2
Haze_21883 Corylus avellana HOM05D002558 ORTHO05D002768 2.7e-10 69.7 102 64.7
MBI01_g24461_MAGBIO Magnolia biondii HOM05D002558 ORTHO05D002768 2.7e-10 69.7 172 41.9
CsaV3_2G030890 Cucumis sativus L. HOM05D002558 ORTHO05D002768 3.5e-10 69.3 208 40.9
arahy.Tifrunner.gnm1.ann1.9C8SD4 Arachis hypogaea HOM05D002558 ORTHO05D002768 4.6e-10 68.9 163 47.9
arahy.Tifrunner.gnm1.ann1.KPU76V Arachis hypogaea HOM05D002558 ORTHO05D002768 4.6e-10 68.9 163 47.9
EL10Ac2g04023 Beta vulgaris HOM05D002558 ORTHO05D002768 6.0e-10 68.6 164 43.9
Lalb_Chr23g0269601 Lupinus albus HOM05D002558 ORTHO05D002768 7.8e-10 68.2 162 45.1
AUR62009287 Chenopodium quinoa HOM05D002558 ORTHO05D002768 1.0e-09 67.8 78 55.1
Sed0023683 Sechium edule HOM05D002558 ORTHO05D002768 1.0e-09 67.8 168 43.5
CARHR201620 Cardamine hirsuta HOM05D002558 ORTHO05D002768 1.3e-09 67.4 89 52.8
Thhalv10014651m.g Eutrema salsugineum HOM05D002558 ORTHO05D002768 1.3e-09 67.4 220 42.3
CAN.G309.70 Capsicum annuum HOM05D000001 ORTHO05D011234 1.7e-09 67.0 80 71.2
ATR0705G067 Amborella trichopoda HOM05D002558 ORTHO05D002768 2.3e-09 66.6 174 38.5
AUR62039693 Chenopodium quinoa HOM05D002558 ORTHO05D002768 3.9e-09 65.9 154 40.9
ClCG08G012260 Citrullus lanatus HOM05D002558 ORTHO05D002768 3.9e-09 65.9 217 40.6
PSO210G3671 Papaver somniferum HOM05D002558 ORTHO05D002768 5.0e-09 65.5 188 39.4
Aqoxy7G01488 Aquilegia oxysepala HOM05D002558 ORTHO05D002768 6.6e-09 65.1 87 47.1
AL6G22300 Arabidopsis lyrata HOM05D000191 ORTHO05D002768 6.6e-09 65.1 176 42.6
Cpa.g.sc522.2 Carica papaya HOM05D002558 ORTHO05D002768 6.6e-09 65.1 107 62.6
TPR.G1349 Trifolium pratense HOM05D002558 ORTHO05D002768 1.5e-08 63.9 174 40.8
Duzib150G0654 Durio zibethinus HOM05D002558 ORTHO05D002768 3.3e-08 62.8 175 48.0
Psat6g037800 Pisum sativum HOM05D002558 ORTHO05D002768 3.3e-08 62.8 206 37.9
TPR.G24532 Trifolium pratense HOM05D002558 ORTHO05D002768 5.6e-08 62.0 89 46.1
Lj8A576T57 Lonicera japonica HOM05D002558 ORTHO05D002768 7.3e-08 61.6 103 48.5
Lj8A586T42 Lonicera japonica HOM05D002558 ORTHO05D002768 7.3e-08 61.6 103 48.5
Nn2g11627 Nelumbo nucifera HOM05D002558 ORTHO05D002768 7.3e-08 61.6 74 50.0
Zm00001eb345570 Zea mays HOM05D002558 ORTHO05D002768 7.3e-08 61.6 146 48.6
HanXRQChr16g0512091 Helianthus annuus HOM05D002558 ORTHO05D002768 9.5e-08 61.2 107 48.6
CDE08G0456 Ceratophyllum demersum HOM05D002558 ORTHO05D002768 1.2e-07 60.8 172 45.3
Phvul.002G267100 Phaseolus vulgaris HOM05D002558 ORTHO05D002768 1.2e-07 60.8 158 38.6
Eucgr.C02926 Eucalyptus grandis HOM05D002558 ORTHO05D002768 1.6e-07 60.5 157 38.9
Medtr1g006605 Medicago truncatula HOM05D002558 ORTHO05D002768 2.1e-07 60.1 153 46.4
Os05g0596200 Oryza sativa ssp. japonica HOM05D002558 ORTHO05D002768 2.8e-07 59.7 130 42.3
DCAR_000750 Daucus carota HOM05D002558 ORTHO05D002768 4.7e-07 58.9 107 56.1
HPP92_024168 Vanilla planifolia HOM05D002558 ORTHO05D002768 4.7e-07 58.9 125 39.2
AT5G11600 Arabidopsis thaliana HOM05D002558 ORTHO05D002768 8.0e-07 58.2 82 51.2
Medtr3g110202 Medicago truncatula HOM05D002558 ORTHO05D002768 8.0e-07 58.2 174 40.8
MBI04_g27061_MAGBIO Magnolia biondii HOM05D002558 ORTHO05D002768 1.1e-06 57.8 74 47.3
Aa31LG3G15580 Aethionema arabicum HOM05D002558 ORTHO05D002768 1.4e-06 57.4 216 37.0
VMungo0251G1540 Vigna mungo HOM05D002558 ORTHO05D002768 1.4e-06 57.4 168 36.9
Lalb_Chr08g0243091 Lupinus albus HOM05D002558 ORTHO05D002768 2.3e-06 56.6 144 44.4


User provided reference genes

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