Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 3.7e-95 352.4 179 100.0
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 4.5e-69 265.8 193 75.1
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 1.2e-66 257.7 193 72.5
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 4.9e-63 245.7 193 68.4
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 6.3e-63 245.4 193 70.5
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 8.3e-63 245.0 242 60.7
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 5.4e-62 242.3 193 67.4
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 2.0e-61 240.4 193 67.9
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 4.5e-61 239.2 193 68.9
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 7.8e-61 238.4 192 66.1
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 1.0e-60 238.0 193 68.4
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 1.3e-60 237.7 193 67.9
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.7e-60 237.3 193 66.3
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 2.3e-60 236.9 193 67.9
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 2.9e-60 236.5 194 68.0
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 3.8e-60 236.1 193 66.3
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 3.8e-60 236.1 193 67.9
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 3.8e-60 236.1 193 66.8
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 5.0e-60 235.7 193 66.3
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 1.1e-59 234.6 193 66.3
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 1.5e-59 234.2 193 65.3
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 1.5e-59 234.2 193 65.8
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 1.5e-59 234.2 193 65.8
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 3.3e-59 233.0 192 65.6
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 4.3e-59 232.6 193 64.8
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 9.5e-59 231.5 189 66.7
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 1.2e-58 231.1 193 65.3
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 1.2e-58 231.1 178 67.4
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 1.6e-58 230.7 189 66.7
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 2.1e-58 230.3 193 65.3
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 2.8e-58 229.9 193 65.8
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 4.7e-58 229.2 193 65.8
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 4.7e-58 229.2 189 66.1
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 6.1e-58 228.8 193 65.3
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 6.1e-58 228.8 193 65.3
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 6.1e-58 228.8 192 66.1
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 1.4e-57 227.6 189 65.6
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 2.3e-57 226.9 189 65.1
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.3e-57 226.9 189 65.1
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 3.0e-57 226.5 193 64.8
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 5.2e-57 225.7 189 65.1
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 5.2e-57 225.7 189 64.6
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 6.8e-57 225.3 186 65.1
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 6.8e-57 225.3 189 65.6
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 6.8e-57 225.3 189 65.6
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 8.9e-57 224.9 192 64.1
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 1.5e-56 224.2 189 65.1
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 3.4e-56 223.0 193 62.7
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 4.4e-56 222.6 189 65.6
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 5.8e-56 222.2 186 64.5
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 5.8e-56 222.2 189 64.6
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 1.3e-55 221.1 193 62.7
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 1.7e-55 220.7 192 61.5
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 3.7e-55 219.5 189 64.0
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 4.9e-55 219.2 193 62.2
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 6.4e-55 218.8 193 62.7
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 8.3e-55 218.4 193 62.2
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 1.4e-54 217.6 193 62.2
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 2.4e-54 216.9 175 63.4
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 4.1e-54 216.1 193 60.6
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 5.4e-54 215.7 193 61.7
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 1.6e-53 214.2 193 62.2
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 2.0e-53 213.8 193 59.1
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 4.6e-53 212.6 192 59.4
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 4.6e-53 212.6 192 59.4
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 4.6e-53 212.6 192 59.4
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 4.6e-53 212.6 192 59.4
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 4.6e-53 212.6 192 59.4
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 6.0e-53 212.2 190 60.5
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 6.0e-53 212.2 190 61.6
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 6.0e-53 212.2 190 61.6
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 7.8e-53 211.8 192 58.9
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 1.3e-52 211.1 193 62.2
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.3e-52 211.1 193 61.7
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 3.0e-52 209.9 192 59.4
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 8.6e-52 208.4 226 55.8
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 1.9e-51 207.2 192 58.9
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 1.9e-51 207.2 192 58.9
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 1.4e-49 201.1 191 58.1
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 3.1e-49 199.9 190 58.4
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 3.1e-49 199.9 193 59.6
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 6.8e-49 198.7 221 52.5
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 1.3e-47 194.5 217 53.0
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 2.9e-47 193.4 188 53.7
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 8.3e-47 191.8 171 62.6
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 2.4e-46 190.3 190 57.9
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 2.4e-46 190.3 177 58.8
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 1.2e-45 188.0 184 56.0
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 2.7e-45 186.8 181 60.8
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 3.9e-44 183.0 166 63.3
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 6.8e-41 172.2 169 59.8
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 1.5e-40 171.0 177 54.8
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 1.7e-39 167.5 171 55.6
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 8.3e-39 165.2 191 48.2
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 1.4e-38 164.5 186 49.5
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 7.3e-35 152.1 170 50.6
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 3.4e-32 143.3 153 51.0
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 6.0e-29 132.5 123 61.8
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 5.1e-28 129.4 126 58.7
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 1.2e-26 124.8 126 57.1
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 2.8e-26 123.6 114 64.9
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 2.2e-23 114.0 131 51.1
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 4.9e-23 112.8 55 89.1
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 1.2e-21 108.2 55 85.5
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 5.1e-20 102.8 52 86.5
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 2.4e-17 94.0 74 70.3
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 2.0e-16 90.9 96 60.4
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 2.0e-16 90.9 74 67.6
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 5.8e-16 89.4 52 69.2
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 1.3e-15 88.2 59 79.7
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 1.9e-14 84.3 95 51.6
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 6.0e-13 79.3 183 31.1
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 6.0e-13 79.3 190 29.5
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 1.1e-11 75.1 64 71.9
GSVIVG01014364001 Vitis vinifera HOM05D000300 ORTHO05D008505 4.8e-10 69.7 48 68.8
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 4.0e-09 66.6 58 65.5
FAN25G3258 Fragaria x ananassa HOM05D000300 ORTHO05D008505 9.0e-09 65.5 85 48.2
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 1.2e-08 65.1 40 82.5
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 6.4e-07 59.3 37 81.1


User provided reference genes

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