Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000662g0060 Nicotiana tabacum HOM05D007708 ORTHO05D009506 8.2e-67 256.9 129 100.0
Nitab4.5_0001610g0030 Nicotiana tabacum HOM05D007708 ORTHO05D009506 1.5e-52 209.5 110 95.5
PGSC0003DMG400040761 Solanum tuberosum HOM05D007708 ORTHO05D009506 6.1e-30 134.4 111 69.4
THA.LOC104818058 Tarenaya hassleriana HOM05D007708 ORTHO05D009506 3.9e-08 62.0 92 42.4
Aa31LG8G2750 Aethionema arabicum HOM05D007708 ORTHO05D009506 5.0e-08 61.6 91 39.6
Lj3g0000986 Lotus japonicus HOM05D007708 ORTHO05D009506 6.6e-08 61.2 115 40.0
Potri.001G404500 Populus trichocarpa HOM05D007708 ORTHO05D009506 6.6e-08 61.2 120 39.2
Carub.0003s1524 Capsella rubella HOM05D007708 ORTHO05D009506 8.6e-08 60.8 77 41.6
COL.COLO4_09450 Corchorus olitorius HOM05D007708 ORTHO05D009506 1.1e-07 60.5 42 66.7
Thecc.07G075600 Theobroma cacao HOM05D007708 ORTHO05D009506 1.1e-07 60.5 35 74.3
Aa31LG10G2210 Aethionema arabicum HOM05D007708 ORTHO05D009506 1.5e-07 60.1 113 37.2
Cc05_g12520 Coffea canephora HOM05D007708 ORTHO05D009506 1.5e-07 60.1 34 79.4
BcaB04g20921 Brassica carinata HOM05D007708 ORTHO05D009506 1.9e-07 59.7 35 65.7
THA.LOC104810490 Tarenaya hassleriana HOM05D007708 ORTHO05D009506 2.5e-07 59.3 113 37.2
BcaC05g28966 Brassica carinata HOM05D007708 ORTHO05D009506 3.3e-07 58.9 86 38.4
C05p51610 Brassica napus HOM05D007708 ORTHO05D009506 3.3e-07 58.9 86 38.4
BolC5t33849H Brassica oleracea HOM05D007708 ORTHO05D009506 3.3e-07 58.9 86 38.4
CARHR090570 Cardamine hirsuta HOM05D007708 ORTHO05D009506 3.3e-07 58.9 100 37.0
Ca_01817_v3 Cicer arietinum L. HOM05D007708 ORTHO05D009506 4.3e-07 58.5 79 46.8
Lalb_Chr07g0181711 Lupinus albus HOM05D007708 ORTHO05D009506 4.3e-07 58.5 34 73.5
Manes.03G114400 Manihot esculenta HOM05D007708 ORTHO05D009506 4.3e-07 58.5 118 40.7
AT3G15518 Arabidopsis thaliana HOM05D007708 ORTHO05D009506 5.6e-07 58.2 77 40.3
CSS0032536 Camellia sinensis var. sinensis HOM05D007708 ORTHO05D009506 5.6e-07 58.2 102 43.1
Potri.011G123600 Populus trichocarpa HOM05D007708 ORTHO05D009506 5.6e-07 58.2 77 45.5
BcaB06g29586 Brassica carinata HOM05D007708 ORTHO05D009506 7.3e-07 57.8 86 38.4
A05p33900 Brassica napus HOM05D007708 ORTHO05D009506 7.3e-07 57.8 86 37.2
BraA05t22212Z Brassica rapa HOM05D007708 ORTHO05D009506 7.3e-07 57.8 86 37.2
Glyma.13G280400 Glycine max HOM05D007708 ORTHO05D009506 7.3e-07 57.8 82 42.7
BcaC09g48516 Brassica carinata HOM05D007708 ORTHO05D009506 9.5e-07 57.4 33 66.7
BcaC09g48517 Brassica carinata HOM05D007708 ORTHO05D009506 9.5e-07 57.4 33 66.7
BolC1t04856H Brassica oleracea HOM05D007708 ORTHO05D009506 9.5e-07 57.4 33 66.7
Sp3g13770 Schrenkiella parvula HOM05D007708 ORTHO05D009506 9.5e-07 57.4 82 37.8
Thhalv10021811m.g Eutrema salsugineum HOM05D007708 ORTHO05D009506 1.6e-06 56.6 77 39.0
Glyma.12G221200 Glycine max HOM05D007708 ORTHO05D009506 1.6e-06 56.6 82 43.9
Oeu052012.1 Olea europaea HOM05D037150 ORTHO05D009506 1.6e-06 56.6 99 35.4
Sed0014711 Sechium edule HOM05D007708 ORTHO05D009506 1.6e-06 56.6 79 43.0
AL3G28090 Arabidopsis lyrata HOM05D007708 ORTHO05D009506 2.1e-06 56.2 100 35.0
QL08p019254 Quercus lobata HOM05D007708 ORTHO05D009506 2.1e-06 56.2 77 42.9
Rhsim06G0195000 Rhododendron simsii HOM05D007708 ORTHO05D009506 2.1e-06 56.2 34 70.6
Duzib268G1443 Durio zibethinus HOM05D007708 ORTHO05D009506 2.8e-06 55.8 107 41.1
CiPaw.11G174300 Carya illinoinensis HOM05D007708 ORTHO05D009506 4.7e-06 55.1 90 41.1
Haze_09495 Corylus avellana HOM05D007708 ORTHO05D009506 4.7e-06 55.1 117 38.5
Cfa020536 Carpinus fangiana HOM05D007708 ORTHO05D009506 6.2e-06 54.7 77 41.6
Gohir.D01G054100 Gossypium hirsutum HOM05D007708 ORTHO05D009506 6.2e-06 54.7 99 42.4
Nn1g06676 Nelumbo nucifera HOM05D007708 ORTHO05D009506 6.2e-06 54.7 103 38.8
Lsat_1_v5_gn_5_7381 Lactuca sativa HOM05D007708 ORTHO05D009506 8.1e-06 54.3 34 70.6
Sed0019748 Sechium edule HOM05D007708 ORTHO05D009506 8.1e-06 54.3 40 60.0


User provided reference genes

Program Settings