Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000653g0120 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-95 353.2 174 100.0
Nitab4.5_0004600g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 4.4e-39 165.2 98 83.7
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 8.9e-16 87.8 134 36.6
Peaxi162Scf00203g00072 Petunia axillaris HOM05D000002 ORTHO05D000001 3.4e-15 85.9 65 61.5
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 2.9e-14 82.8 107 38.3
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 4.9e-14 82.0 140 32.9
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-13 80.1 140 42.9
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 2.4e-13 79.7 133 33.8
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.1e-13 79.0 94 44.7
Peaxi162Scf00404g00036 Petunia axillaris HOM05D000002 ORTHO05D000001 4.1e-13 79.0 70 55.7
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.4e-13 78.6 148 33.8
Hma1.2p1_0763F.1_g214730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.4e-13 78.6 131 36.6
Sopen03g011550 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-13 78.6 120 39.2
Solyc12g038100.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 7.0e-13 78.2 126 34.1
Solyc12g039110.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 7.0e-13 78.2 99 39.4
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-13 78.2 137 42.3
Peaxi162Scf00036g00053 Petunia axillaris HOM05D000002 ORTHO05D000001 9.2e-13 77.8 83 48.2
Sopen12g017720 Solanum pennellii HOM05D000006 ORTHO05D000001 2.0e-12 76.6 118 36.4
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-12 76.3 137 42.3
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-12 76.3 137 40.9
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-12 75.9 102 39.2
Peaxi162Scf00006g00121 Petunia axillaris HOM05D000002 ORTHO05D000001 6.0e-12 75.1 106 38.7
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.0e-11 74.3 74 47.3
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 1.7e-11 73.6 103 41.7
Peaxi162Scf00136g00193 Petunia axillaris HOM05D000002 ORTHO05D000001 1.7e-11 73.6 133 32.3
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-11 73.6 77 53.2
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-11 73.6 141 41.1
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-11 73.2 118 39.8
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.0e-11 72.8 68 50.0
Sopen01g017880 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-11 72.0 97 35.1
COL.COLO4_37640 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.1e-10 70.9 149 36.2
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-10 70.9 135 37.0
Nitab4.5_0000027g0330 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-10 70.9 129 34.9
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-10 70.9 103 46.6
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 3.3e-10 69.3 89 43.8
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-10 69.3 146 37.0
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-10 69.3 135 34.1
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.6e-10 68.6 121 34.7
Nitab4.5_0002521g0050 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.6e-10 68.6 65 44.6
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.6e-10 68.6 152 34.2
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 7.3e-10 68.2 115 40.0
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 7.3e-10 68.2 80 45.0
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.3e-10 68.2 89 43.8
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-10 68.2 130 38.5
Peaxi162Scf00718g00053 Petunia axillaris HOM05D000002 ORTHO05D000001 9.5e-10 67.8 100 34.0
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-09 67.0 143 35.0
FvH4_4g13041 Fragaria vesca HOM05D014640 ORTHO05D000001 2.1e-09 66.6 134 32.1
Peaxi162Scf00028g00051 Petunia axillaris HOM05D000002 ORTHO05D000001 2.1e-09 66.6 84 36.9
Solyc05g025970.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.1e-09 66.6 103 36.9
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-09 66.6 81 49.4
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 2.8e-09 66.2 101 39.6
RcHm_v2.0_Chr1g0344491 Rosa chinensis HOM05D000002 ORTHO05D000001 2.8e-09 66.2 155 34.2
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-09 65.9 172 32.6
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 6.2e-09 65.1 144 33.3
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 6.2e-09 65.1 145 33.1
Atru.chr3.2937 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-08 64.3 122 36.1
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 111 33.3
RcHm_v2.0_Chr2g0141981 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-08 63.5 154 29.9
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-08 63.5 79 49.4
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-08 63.5 136 30.1
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-08 63.2 117 35.9
RcHm_v2.0_Chr1g0339131 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-08 63.2 149 31.5
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.3e-08 63.2 134 33.6
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 3.1e-08 62.8 157 30.6
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 3.1e-08 62.8 126 35.7
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 4.0e-08 62.4 148 35.8
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.0e-08 62.4 114 31.6
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 4.0e-08 62.4 107 36.4
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-08 62.4 92 42.4
Psat0s454g0080 Pisum sativum HOM05D000002 ORTHO05D000001 4.0e-08 62.4 107 39.3
RcHm_v2.0_Chr3g0482021 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-08 62.4 135 32.6
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.2e-08 62.0 152 28.3
Psat4g122360 Pisum sativum HOM05D000002 ORTHO05D000001 5.2e-08 62.0 151 33.8
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 5.2e-08 62.0 109 38.5
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-08 61.6 96 40.6
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-08 61.6 96 40.6
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 8.9e-08 61.2 93 39.8
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-08 61.2 96 40.6
CAN.G1447.12 Capsicum annuum HOM05D000011 ORTHO05D001721 8.9e-08 61.2 93 39.8
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-08 61.2 88 44.3
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.9e-08 61.2 100 36.0
PSO384G4937 Papaver somniferum HOM05D000002 ORTHO05D000001 8.9e-08 61.2 73 37.0
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 8.9e-08 61.2 93 37.6
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.2e-07 60.8 152 27.6
FvH4_3g07841 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-07 60.8 101 36.6
RcHm_v2.0_Chr5g0083071 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.8 154 29.2
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.5e-07 60.5 108 34.3
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 1.5e-07 60.5 144 31.2
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 1.5e-07 60.5 144 31.2
Nitab4.5_0000243g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.0e-07 60.1 88 37.5
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.0e-07 60.1 125 35.2
TWI59G0793 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.0e-07 60.1 127 27.6
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.6e-07 59.7 95 37.9
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-07 59.3 90 35.6
RcHm_v2.0_Chr1g0366871 Rosa chinensis HOM05D000062 ORTHO05D000043 3.4e-07 59.3 75 40.0
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-07 59.3 63 50.8
RcHm_v2.0_Chr2g0156571 Rosa chinensis HOM05D000002 ORTHO05D000001 4.4e-07 58.9 128 34.4
RcHm_v2.0_Chr5g0025271 Rosa chinensis HOM05D000002 ORTHO05D000001 4.4e-07 58.9 83 38.6
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-07 58.9 83 39.8
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-07 58.5 95 37.9
Sopen06g014070 Solanum pennellii HOM05D000006 ORTHO05D000001 5.8e-07 58.5 80 40.0
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-07 58.5 76 44.7
COL.COLO4_24669 Corchorus olitorius HOM05D014020 ORTHO05D000001 7.5e-07 58.2 128 31.2
Lj2g0009180 Lotus japonicus HOM05D000002 ORTHO05D000001 7.5e-07 58.2 106 34.9
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.5e-07 58.2 82 39.0
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 7.5e-07 58.2 82 36.6
CSS0037188 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-07 57.8 106 35.8
Psat1g116320 Pisum sativum HOM05D000002 ORTHO05D000001 9.8e-07 57.8 117 34.2
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 9.8e-07 57.8 125 30.4
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.3e-06 57.4 114 34.2
MD08G1157400 Malus domestica HOM05D025337 ORTHO05D000001 1.3e-06 57.4 85 28.2
Solyc06g033930.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.3e-06 57.4 102 37.3
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 57.4 126 35.7
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 57.4 126 35.7
THA.LOC104825710 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 57.4 127 32.3
CSS0050444 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 57.0 158 27.8
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 57.0 110 32.7
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 1.7e-06 57.0 138 29.0
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-06 56.6 91 38.5
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.2e-06 56.6 91 37.4
COL.COLO4_22605 Corchorus olitorius HOM05D014020 ORTHO05D000001 2.9e-06 56.2 89 36.0
Nitab4.5_0002098g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.9e-06 56.2 65 43.1
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-06 56.2 133 29.3
THA.LOC109115967 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.9e-06 56.2 84 42.9
CANSAT64G1606 Cannabis sativa HOM05D000002 ORTHO05D000001 3.7e-06 55.8 162 25.9
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 3.7e-06 55.8 139 31.7
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.7e-06 55.8 71 42.3
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.7e-06 55.8 71 42.3
HanXRQChr14g0461191 Helianthus annuus HOM05D000002 ORTHO05D000001 3.7e-06 55.8 137 27.7
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-06 55.8 60 40.0
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-06 55.8 149 30.2
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 3.7e-06 55.8 73 37.0
PSO339G3901 Papaver somniferum HOM05D000002 ORTHO05D000001 3.7e-06 55.8 89 38.2
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 4.9e-06 55.5 69 42.0
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-06 55.5 112 33.0
COL.COLO4_18983 Corchorus olitorius HOM05D014020 ORTHO05D000001 4.9e-06 55.5 73 32.9
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 4.9e-06 55.5 135 30.4
PSO761G0433 Papaver somniferum HOM05D000002 ORTHO05D000001 4.9e-06 55.5 73 38.4
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 4.9e-06 55.5 92 39.1
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 4.9e-06 55.5 93 41.9
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.9e-06 55.5 147 32.0
CSS0002979 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 84 41.7
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 123 31.7
Ciclev10006756m.g Citrus clementina HOM05D047940 ORTHO05D000001 6.4e-06 55.1 65 44.6
COL.COLO4_16378 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.4e-06 55.1 61 44.3
Dinv15870 Davidia involucrata HOM05D000467 ORTHO05D000379 6.4e-06 55.1 151 29.1
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 110 32.7
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 110 32.7
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.4e-06 55.1 96 34.4
PSO017G2967 Papaver somniferum HOM05D000002 ORTHO05D000001 6.4e-06 55.1 116 31.9
PSO170G6306 Papaver somniferum HOM05D000002 ORTHO05D000001 6.4e-06 55.1 74 36.5
RcHm_v2.0_Chr5g0004361 Rosa chinensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 86 34.9
THA.LOC104817067 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.4e-06 55.1 93 36.6
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.4e-06 55.1 100 36.0
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-06 54.7 82 39.0
ECA233G4466 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-06 54.7 103 32.0
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 8.3e-06 54.7 140 25.7
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 8.3e-06 54.7 105 32.4
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 8.3e-06 54.7 160 28.1
THA.LOC104807900 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.3e-06 54.7 134 30.6


User provided reference genes

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