Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 8.0e-189 663.7 355 100.0
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 7.7e-184 647.1 355 97.2
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 2.1e-173 612.5 355 91.5
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.0e-172 610.1 355 91.5
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.8e-172 609.4 355 91.3
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 8.9e-172 607.1 352 91.2
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.9e-170 602.1 351 91.2
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.8e-156 556.2 356 81.7
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 3.7e-154 548.5 357 81.8
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 7.8e-152 540.8 356 79.8
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 3.0e-151 538.9 356 78.4
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 2.5e-150 535.8 356 79.8
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 4.3e-150 535.0 351 80.3
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 2.1e-149 532.7 357 80.1
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.4e-148 530.0 332 83.1
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 2.4e-148 529.3 333 82.6
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.2e-147 526.9 360 77.2
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 4.4e-147 525.0 356 77.0
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.9e-146 522.3 362 77.1
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 3.8e-146 521.9 354 76.8
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 6.4e-146 521.2 355 77.7
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.1e-145 520.4 348 78.7
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.5e-144 515.4 333 80.2
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 4.6e-144 515.0 362 75.7
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 6.0e-144 514.6 362 75.4
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 7.8e-144 514.2 356 76.7
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.0e-143 513.8 369 75.1
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.0e-143 513.8 362 74.9
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.3e-143 513.5 347 77.2
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 3.0e-143 512.3 355 75.2
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 3.9e-143 511.9 332 79.8
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 5.1e-143 511.5 348 77.6
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.5e-142 509.2 333 79.9
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 5.6e-142 508.1 366 74.0
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 9.6e-142 507.3 362 74.3
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 9.6e-142 507.3 355 75.8
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 9.6e-142 507.3 355 75.8
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.2e-141 506.9 333 78.1
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 8.1e-141 504.2 333 78.4
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.1e-140 503.8 358 74.6
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.4e-140 503.4 360 73.9
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 5.3e-140 501.5 334 79.3
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 5.3e-140 501.5 332 77.7
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 6.9e-140 501.1 333 79.3
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 6.9e-140 501.1 358 75.4
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.2e-139 500.4 333 77.5
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 4.4e-139 498.4 356 73.3
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 9.9e-139 497.3 333 77.2
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.3e-138 496.9 338 77.5
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.1e-137 493.8 336 76.2
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.9e-137 493.0 349 73.9
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.2e-137 492.3 356 72.5
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.2e-137 491.9 349 73.9
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 5.4e-137 491.5 345 74.8
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 7.1e-137 491.1 336 75.6
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 7.1e-137 491.1 352 73.9
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 9.3e-137 490.7 362 72.1
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.2e-136 490.3 360 74.2
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 3.5e-136 488.8 358 72.9
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 4.6e-136 488.4 363 73.8
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 4.6e-136 488.4 335 78.8
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 6.0e-136 488.0 336 78.0
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 6.0e-136 488.0 352 73.9
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 2.3e-135 486.1 343 73.8
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 5.1e-135 485.0 348 74.1
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 6.6e-135 484.6 333 75.1
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 6.6e-135 484.6 365 71.8
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 1.9e-134 483.0 365 71.5
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.6e-133 479.9 332 76.5
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 6.2e-133 478.0 360 72.5
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 6.2e-133 478.0 360 72.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 3.1e-132 475.7 355 70.1
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 2.0e-131 473.0 335 74.3
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.5e-131 471.9 348 71.3
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.2e-130 469.5 349 72.2
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.9e-130 469.2 348 71.3
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 3.8e-130 468.8 348 71.3
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 3.8e-130 468.8 348 71.3
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.8e-130 468.8 348 71.3
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.9e-129 466.5 348 70.7
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.4e-129 466.1 349 71.1
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 2.4e-129 466.1 342 73.7
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 3.5e-128 462.2 333 73.3
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 7.9e-128 461.1 358 71.2
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 3.3e-126 455.7 299 80.3
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 2.8e-125 452.6 340 71.2
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 6.2e-125 451.4 330 69.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.9e-122 442.6 270 82.2
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.9e-121 439.9 279 80.3
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.4e-108 397.1 356 62.4
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.5e-107 393.7 354 56.5
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.1e-105 387.5 354 55.4
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.7e-104 382.9 289 70.9
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.4e-103 380.6 338 59.8
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 4.5e-99 365.5 265 74.7
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 8.8e-87 324.7 381 53.0
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 2.7e-75 286.6 242 62.0
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.5e-75 286.2 273 57.9
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 5.0e-74 282.3 349 46.4
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 4.7e-72 275.8 229 67.2
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 3.7e-69 266.2 328 47.0
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 3.8e-66 256.1 263 52.5
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.2e-65 251.9 151 82.8
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 7.5e-62 241.9 332 43.4
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 7.5e-62 241.9 182 70.3
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 2.7e-59 233.4 332 47.0
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-58 231.5 193 64.2
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.1e-55 219.9 186 65.1
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.6e-48 196.4 198 52.5
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.2e-46 191.4 140 74.3
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.0e-42 176.8 134 67.9
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 4.7e-40 169.5 265 40.8
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.0e-38 164.1 135 66.7
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.4e-38 162.9 91 89.0
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 6.0e-27 125.9 131 49.6
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.3e-26 124.8 138 60.9
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 9.6e-25 118.6 66 87.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.9e-21 107.1 57 91.2
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 8.7e-18 95.5 89 56.2
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.2e-13 80.9 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 6.4e-13 79.3 46 84.8


User provided reference genes

Program Settings