Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.1e-86 320.5 194 100.0
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-62 242.7 182 83.0
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.7e-58 228.4 187 71.1
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.5e-56 221.1 194 75.3
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-53 213.4 176 79.0
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-53 212.2 179 72.6
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-52 210.3 183 76.5
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.0e-52 208.4 159 79.9
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.0e-52 208.4 193 73.6
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-51 206.1 181 69.6
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.8e-48 194.1 169 76.3
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-43 180.3 126 75.4
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.3e-43 179.1 106 87.7
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.5e-43 177.6 197 57.9
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-42 177.2 106 84.9
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-42 177.2 101 88.1
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-39 165.6 150 74.0
Nitab4.5_0005116g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-39 165.6 150 72.0
Nitab4.5_0000248g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.1e-38 162.2 199 55.8
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.0e-36 155.2 175 66.3
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.6e-36 154.8 110 74.5
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.6e-35 151.8 103 77.7
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.5e-35 151.0 186 58.1
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.7e-34 148.7 187 54.5
Nitab4.5_0000270g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-33 146.4 94 80.9
Nitab4.5_0001996g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.6e-32 142.9 118 70.3
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.4e-30 135.2 120 69.2
Nitab4.5_0001817g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-27 126.3 127 70.1
Nitab4.5_0002026g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-27 126.3 107 69.2
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.1e-26 121.3 68 91.2
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-24 117.5 92 66.3
Nitab4.5_0000965g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-24 117.1 140 65.7
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 5.8e-24 115.2 125 54.4
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-23 114.0 66 89.4
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.9e-23 112.8 67 88.1
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 2.9e-23 112.8 112 54.5
Nitab4.5_0000337g0280 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.4e-23 111.7 104 72.1
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 8.4e-23 111.3 115 53.0
Peaxi162Scf00073g00225 Petunia axillaris HOM05D003329 ORTHO05D006664 5.4e-22 108.6 125 48.8
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 1.6e-21 107.1 127 48.0
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 1.6e-21 107.1 127 48.0
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-21 106.7 65 84.6
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-21 106.7 75 74.7
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 2.1e-21 106.7 125 48.8
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 2.7e-21 106.3 109 55.0
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.7e-21 106.3 127 53.5
Peaxi162Scf04852g00001 Petunia axillaris HOM05D003329 ORTHO05D006664 4.6e-21 105.5 125 48.0
Nitab4.5_0009435g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-20 104.0 105 61.0
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.0e-20 102.8 127 52.0
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.0e-20 102.8 127 52.0
Nitab4.5_0005015g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.6e-20 101.7 106 58.5
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 6.6e-20 101.7 114 52.6
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.6e-20 101.3 68 79.4
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 8.6e-20 101.3 103 55.3
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 1.9e-19 100.1 99 57.6
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 3.3e-19 99.4 112 53.6
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 3.3e-19 99.4 118 48.3
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 7.3e-19 98.2 81 61.7
Peaxi162Scf00385g00063 Petunia axillaris HOM05D003329 ORTHO05D006664 9.6e-19 97.8 141 43.3
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 1.2e-18 97.4 131 48.1
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 1.6e-18 97.1 91 56.0
Nitab4.5_0011105g0030 Nicotiana tabacum HOM05D003329 ORTHO05D000013 3.6e-18 95.9 118 50.8
Peaxi162Scf00802g00124 Petunia axillaris HOM05D003329 ORTHO05D006664 4.7e-18 95.5 127 45.7
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.8e-17 93.6 118 48.3
Nitab4.5_0000901g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-17 93.2 106 70.8
Peaxi162Scf00802g00125 Petunia axillaris HOM05D003329 ORTHO05D006664 2.4e-17 93.2 127 44.9
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 8.9e-17 91.3 110 46.4
Peaxi162Scf00225g00104 Petunia axillaris HOM05D003329 ORTHO05D006664 3.4e-16 89.4 132 40.9
Peaxi162Scf01414g00018 Petunia axillaris HOM05D003329 ORTHO05D006664 3.4e-16 89.4 132 40.9
Peaxi162Scf00990g00006 Petunia axillaris HOM05D003329 ORTHO05D006664 5.8e-16 88.6 131 41.2
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 2.9e-15 86.3 98 50.0
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 3.8e-15 85.9 97 50.5
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.9e-15 85.5 78 53.8
Peaxi162Scf00021g00075 Petunia axillaris HOM05D003329 ORTHO05D006664 6.4e-15 85.1 131 40.5
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 1.9e-14 83.6 119 47.1
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 2.4e-14 83.2 81 53.1
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 4.2e-14 82.4 67 59.7
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.1e-13 80.1 68 61.8
Peaxi162Scf00171g00215 Petunia axillaris HOM05D003329 ORTHO05D006664 2.7e-13 79.7 120 39.2
Peaxi162Scf00174g00315 Petunia axillaris HOM05D003329 ORTHO05D001349 6.0e-13 78.6 86 46.5
Nitab4.5_0008743g0020 Nicotiana tabacum HOM05D003329 ORTHO05D015718 1.3e-12 77.4 92 42.4
Nitab4.5_0001433g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-12 77.0 71 52.1
Peaxi162Scf00178g00072 Petunia axillaris HOM05D003329 ORTHO05D006664 1.7e-12 77.0 75 52.0
Nitab4.5_0003338g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.1e-12 75.5 48 72.9
Nitab4.5_0003774g0080 Nicotiana tabacum HOM05D003329 ORTHO05D001349 8.7e-12 74.7 74 45.9
Nitab4.5_0005696g0060 Nicotiana tabacum HOM05D003329 ORTHO05D015718 1.9e-11 73.6 90 41.1
Peaxi162Scf00098g00068 Petunia axillaris HOM05D003329 ORTHO05D015718 1.9e-11 73.6 85 52.9
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 3.3e-11 72.8 98 42.9
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.3e-11 72.4 65 63.1
Nitab4.5_0003152g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 5.6e-11 72.0 116 36.2
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-11 72.0 84 48.8
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 7.3e-11 71.6 73 54.8
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 1.6e-10 70.5 84 50.0
Nitab4.5_0001065g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-10 70.5 95 48.4
Peaxi162Scf00031g00088 Petunia axillaris HOM05D003329 ORTHO05D001349 6.2e-10 68.6 101 42.6
Nitab4.5_0001696g0160 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-09 67.8 34 94.1
Peaxi162Scf00107g01612 Petunia axillaris HOM05D003329 ORTHO05D001349 1.1e-09 67.8 175 34.9
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 1.4e-09 67.4 66 53.0
Nitab4.5_0009003g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.0e-09 65.9 99 39.4
Sopen07g021890 Solanum pennellii HOM05D000004 ORTHO05D006664 5.3e-09 65.5 60 55.0
Nitab4.5_0012182g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.2e-08 64.3 118 33.1
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 1.2e-08 64.3 86 41.9
Nitab4.5_0000061g0190 Nicotiana tabacum HOM05D003329 ORTHO05D001349 2.0e-08 63.5 100 38.0
Peaxi162Scf00130g00316 Petunia axillaris HOM05D003329 ORTHO05D006664 2.0e-08 63.5 58 55.2
Peaxi162Scf00133g00123 Petunia axillaris HOM05D000017 ORTHO05D009364 2.6e-08 63.2 116 34.5
CAN.G3481.2 Capsicum annuum HOM05D003329 ORTHO05D006664 3.4e-08 62.8 90 45.6
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 3.4e-08 62.8 104 33.7
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 3.4e-08 62.8 109 34.9
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 3.4e-08 62.8 92 38.0
Nitab4.5_0002850g0070 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.5e-08 62.4 54 46.3
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 5.8e-08 62.0 106 34.9
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-08 62.0 106 34.9
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 5.8e-08 62.0 106 34.9
Nitab4.5_0000437g0220 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.6e-08 61.6 70 51.4
Nitab4.5_0002469g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.6e-08 61.6 82 42.7
PGSC0003DMG400023085 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.3e-07 60.8 81 40.7
Peaxi162Scf00147g00092 Petunia axillaris HOM05D000017 ORTHO05D001349 1.7e-07 60.5 96 37.5
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.2e-07 60.1 84 36.9
Nitab4.5_0000032g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.9e-07 59.7 99 36.4
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 2.9e-07 59.7 72 44.4
Nitab4.5_0001309g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-07 59.3 85 67.1
Nitab4.5_0012220g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.8e-07 59.3 68 48.5
Solyc04g050445.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 3.8e-07 59.3 71 49.3
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 3.8e-07 59.3 106 34.0
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.9e-07 58.9 87 43.7
Nitab4.5_0001794g0070 Nicotiana tabacum HOM05D003329 ORTHO05D015718 4.9e-07 58.9 59 47.5
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 4.9e-07 58.9 85 38.8
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 4.9e-07 58.9 106 34.9
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 4.9e-07 58.9 106 34.9
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-07 58.9 106 34.9
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-07 58.9 106 34.9
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 4.9e-07 58.9 106 34.9
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-07 58.9 106 34.9
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-07 58.9 106 34.9
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-07 58.9 106 34.9
Nitab4.5_0000944g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.4e-07 58.5 79 40.5
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-07 58.5 106 34.9
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-07 58.5 106 34.9
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.4e-07 58.2 90 41.1
Solyc01g111480.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 57.8 106 35.8
Solyc02g031730.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 57.8 81 38.3
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 1.1e-06 57.8 100 36.0
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 1.1e-06 57.8 106 34.0
Nitab4.5_0000164g0170 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.4e-06 57.4 62 43.5
Nitab4.5_0022073g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.9e-06 57.0 118 38.1
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-06 57.0 83 43.4
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-06 57.0 87 42.5
Peaxi162Scf00066g01917 Petunia axillaris HOM05D000017 ORTHO05D015725 1.9e-06 57.0 83 39.8
Peaxi162Scf00131g00813 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-06 57.0 101 36.6
Peaxi162Scf00186g01311 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-06 57.0 91 33.0
Peaxi162Scf00445g00614 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-06 57.0 91 33.0
Peaxi162Scf00790g00004 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-06 57.0 91 33.0
Peaxi162Scf01266g00038 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-06 57.0 82 37.8
CAN.G921.8 Capsicum annuum HOM05D001891 ORTHO05D005832 2.4e-06 56.6 83 43.4
Nitab4.5_0001784g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.4e-06 56.6 107 35.5
Peaxi162Scf00127g00194 Petunia axillaris HOM05D003329 ORTHO05D001349 2.4e-06 56.6 125 32.0
Peaxi162Scf00825g00013 Petunia axillaris HOM05D003329 ORTHO05D001349 2.4e-06 56.6 125 32.0
Peaxi162Scf00839g00021 Petunia axillaris HOM05D003329 ORTHO05D001349 2.4e-06 56.6 125 32.0
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-06 56.6 93 35.5
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.2e-06 56.2 89 38.2
Peaxi162Scf00290g00112 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-06 56.2 123 33.3
Peaxi162Scf00840g00013 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-06 56.2 82 36.6
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 3.2e-06 56.2 109 31.2
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 3.2e-06 56.2 94 35.1
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.2e-06 55.8 83 41.0
Sopen09g007720 Solanum pennellii HOM05D000017 ORTHO05D009364 4.2e-06 55.8 106 33.0
Nitab4.5_0006039g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.4e-06 55.5 118 34.7
Peaxi162Scf00001g04233 Petunia axillaris HOM05D000017 ORTHO05D001349 5.4e-06 55.5 86 38.4
Peaxi162Scf00141g01118 Petunia axillaris HOM05D000017 ORTHO05D001349 5.4e-06 55.5 91 33.0
Solyc03g096305.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 7.1e-06 55.1 89 34.8
Nitab4.5_0000427g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.3e-06 54.7 83 39.8
Peaxi162Scf00528g00120 Petunia axillaris HOM05D000017 ORTHO05D009364 9.3e-06 54.7 93 32.3
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 9.3e-06 54.7 106 32.1
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 9.3e-06 54.7 106 31.1


User provided reference genes

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