Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 7.1e-72 273.9 142 100.0
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 8.4e-65 250.4 138 92.0
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 2.0e-50 202.6 137 81.8
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 2.5e-48 195.7 139 72.7
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 3.6e-47 191.8 143 69.2
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 4.6e-47 191.4 141 69.5
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 4.5e-34 148.3 141 60.3
Peaxi162Scf00101g00083 Petunia axillaris HOM05D005728 ORTHO05D005733 1.1e-27 127.1 137 55.5
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 7.0e-27 124.4 135 50.4
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 1.2e-26 123.6 129 51.9
Nitab4.5_0000196g0120 Nicotiana tabacum HOM05D005728 ORTHO05D005733 7.7e-26 120.9 140 52.9
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 2.5e-24 115.9 133 45.9
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 2.5e-24 115.9 136 49.3
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 9.4e-24 114.0 138 49.3
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 8.0e-23 110.9 136 47.1
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.0e-22 110.5 139 49.6
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 2.3e-22 109.4 138 45.7
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 2.3e-22 109.4 140 47.9
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 3.4e-21 105.5 113 48.7
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 5.7e-21 104.8 138 47.8
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 7.5e-21 104.4 138 44.2
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 9.8e-21 104.0 139 46.0
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 9.8e-21 104.0 134 44.8
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 9.8e-21 104.0 139 43.2
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 1.7e-20 103.2 137 43.1
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.7e-20 103.2 124 48.4
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 1.7e-20 103.2 132 48.5
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 2.2e-20 102.8 137 46.0
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 3.7e-20 102.1 138 44.9
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 3.7e-20 102.1 122 47.5
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 6.3e-20 101.3 141 44.7
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 8.3e-20 100.9 137 43.8
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 8.3e-20 100.9 141 44.7
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 8.3e-20 100.9 141 44.7
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 1.1e-19 100.5 131 45.8
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.4e-19 100.1 141 44.7
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 4.1e-19 98.6 141 44.0
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 5.4e-19 98.2 130 44.6
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 7.0e-19 97.8 135 45.2
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 7.0e-19 97.8 140 45.0
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.2e-18 97.1 136 43.4
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 1.6e-18 96.7 135 42.2
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.0e-18 96.3 136 43.4
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 2.0e-18 96.3 136 43.4
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 2.7e-18 95.9 137 43.1
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 2.7e-18 95.9 129 45.0
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 3.5e-18 95.5 142 43.0
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 3.5e-18 95.5 134 41.8
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 3.5e-18 95.5 132 40.2
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 4.5e-18 95.1 133 44.4
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 4.5e-18 95.1 133 43.6
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 4.5e-18 95.1 129 41.9
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 5.9e-18 94.7 137 45.3
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 1.0e-17 94.0 135 44.4
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 1.3e-17 93.6 112 50.9
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 1.7e-17 93.2 138 43.5
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 2.3e-17 92.8 133 45.1
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 2.3e-17 92.8 131 44.3
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 2.9e-17 92.4 114 45.6
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 2.9e-17 92.4 136 43.4
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 3.8e-17 92.0 135 42.2
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 5.0e-17 91.7 129 45.0
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 5.0e-17 91.7 124 43.5
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 6.5e-17 91.3 110 50.9
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 1.5e-16 90.1 136 42.6
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.5e-16 90.1 141 41.1
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 2.5e-16 89.4 134 45.5
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 2.5e-16 89.4 128 42.2
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 3.3e-16 89.0 141 41.1
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 5.5e-16 88.2 137 41.6
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 5.5e-16 88.2 129 41.1
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 9.5e-16 87.4 127 45.7
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 9.5e-16 87.4 137 40.9
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 9.5e-16 87.4 139 41.0
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 1.2e-15 87.0 124 41.1
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.6e-15 86.7 137 40.1
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 2.1e-15 86.3 137 40.1
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 2.1e-15 86.3 132 41.7
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 2.1e-15 86.3 132 43.2
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 2.8e-15 85.9 132 41.7
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 3.6e-15 85.5 129 41.1
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 6.1e-15 84.7 136 39.0
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 6.1e-15 84.7 137 40.9
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 1.8e-14 83.2 137 40.1
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 1.8e-14 83.2 117 47.0
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 1.8e-14 83.2 117 47.0
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 2.3e-14 82.8 128 40.6
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 3.0e-14 82.4 118 44.9
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 3.0e-14 82.4 132 42.4
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 4.0e-14 82.0 118 45.8
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.5e-13 80.1 133 36.1
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.5e-13 80.1 137 38.7
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 1.5e-13 80.1 130 41.5
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 4.4e-13 78.6 117 47.0
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 4.4e-13 78.6 117 47.0
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 4.4e-13 78.6 129 40.3
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 9.8e-13 77.4 134 39.6
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 9.8e-13 77.4 137 42.3
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 2.2e-12 76.3 133 39.1
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 2.8e-12 75.9 117 44.4
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 3.7e-12 75.5 127 40.2
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 4.9e-12 75.1 118 39.8
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 6.3e-12 74.7 136 38.2
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 6.3e-12 74.7 117 46.2
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 6.3e-12 74.7 114 39.5
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 8.3e-12 74.3 118 39.8
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 1.4e-11 73.6 117 43.6
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 1.4e-11 73.6 117 43.6
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 1.8e-11 73.2 117 42.7
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 1.8e-11 73.2 117 41.0
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 1.8e-11 73.2 134 41.0
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 3.1e-11 72.4 138 37.7
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 4.1e-11 72.0 118 39.0
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 5.4e-11 71.6 114 41.2
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 5.4e-11 71.6 114 41.2
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 7.0e-11 71.2 105 42.9
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 9.2e-11 70.9 144 34.7
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 1.6e-10 70.1 119 43.7
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 2.0e-10 69.7 114 40.4
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 2.0e-10 69.7 141 37.6
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 2.0e-10 69.7 130 36.9
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 4.5e-10 68.6 120 38.3
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 5.9e-10 68.2 135 35.6
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 1.0e-09 67.4 132 37.1
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 3.8e-09 65.5 146 39.0
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 6.6e-09 64.7 115 38.3
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.9e-08 63.2 114 41.2
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 6.1e-07 58.2 143 34.3
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 6.1e-07 58.2 143 34.3
Oeu001270.1 Olea europaea HOM05D005728 ORTHO05D005733 8.0e-07 57.8 133 33.8
BraA10t43864Z Brassica rapa HOM05D010860 ORTHO05D005733 1.0e-06 57.4 137 32.1
Thhalv10014945m.g Eutrema salsugineum HOM05D010860 ORTHO05D005733 3.0e-06 55.8 131 32.1
BcaB08g36363 Brassica carinata HOM05D010860 ORTHO05D005733 5.2e-06 55.1 145 33.8
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 6.8e-06 54.7 119 33.6
AT5G60650 Arabidopsis thaliana HOM05D010860 ORTHO05D005733 6.8e-06 54.7 140 33.6
Oeu030182.1 Olea europaea HOM05D005728 ORTHO05D005733 8.9e-06 54.3 108 36.1


User provided reference genes

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