Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 6.4e-45 183.7 94 100.0
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 2.1e-32 142.1 86 81.4
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 3.7e-32 141.4 86 81.4
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 9.3e-28 126.7 87 74.7
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 5.1e-26 120.9 86 68.6
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 3.3e-25 118.2 86 68.6
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 3.7e-24 114.8 86 73.3
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 3.7e-24 114.8 86 67.4
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 6.9e-23 110.5 86 65.1
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.6e-22 108.6 86 64.0
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.6e-22 108.6 86 65.1
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 4.5e-22 107.8 80 65.0
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 5.8e-22 107.5 86 68.6
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.0e-21 106.7 84 66.7
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 1.0e-21 106.7 86 66.3
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.7e-21 105.9 90 61.1
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 2.9e-21 105.1 86 68.6
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 3.8e-21 104.8 86 65.1
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 4.9e-21 104.4 86 67.4
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 4.9e-21 104.4 86 66.3
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 4.9e-21 104.4 90 61.1
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 4.9e-21 104.4 86 66.3
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 4.9e-21 104.4 86 60.5
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 6.5e-21 104.0 86 66.3
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 1.1e-20 103.2 86 61.6
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 1.1e-20 103.2 86 66.3
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 2.5e-20 102.1 86 64.0
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 2.5e-20 102.1 86 64.0
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 2.5e-20 102.1 80 67.5
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.2e-20 101.7 86 65.1
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 4.2e-20 101.3 91 61.5
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 4.2e-20 101.3 85 64.7
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 4.2e-20 101.3 86 64.0
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 4.2e-20 101.3 86 61.6
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 7.1e-20 100.5 86 64.0
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 1.2e-19 99.8 86 60.5
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 2.1e-19 99.0 86 61.6
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.7e-19 98.6 86 60.5
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 2.7e-19 98.6 86 61.6
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 3.5e-19 98.2 90 58.9
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 3.5e-19 98.2 86 64.0
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 4.6e-19 97.8 86 61.6
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 4.6e-19 97.8 86 64.0
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 6.0e-19 97.4 86 60.5
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 6.0e-19 97.4 86 58.1
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 6.0e-19 97.4 86 58.1
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 7.9e-19 97.1 86 60.5
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 7.9e-19 97.1 86 55.8
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 1.3e-18 96.3 90 57.8
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.9e-18 94.7 74 64.9
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.9e-18 94.7 87 57.5
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 3.9e-18 94.7 87 57.5
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 3.9e-18 94.7 87 57.5
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 3.9e-18 94.7 87 57.5
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 3.9e-18 94.7 87 57.5
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 3.9e-18 94.7 86 60.5
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 5.1e-18 94.4 85 58.8
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 5.1e-18 94.4 86 62.8
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 5.1e-18 94.4 86 61.6
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 8.7e-18 93.6 88 58.0
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.5e-17 92.8 83 59.0
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 1.9e-17 92.4 86 58.1
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.9e-17 92.4 86 58.1
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.9e-17 92.4 86 55.8
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.9e-17 92.4 86 58.1
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 2.5e-17 92.0 86 59.3
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 3.3e-17 91.7 87 60.9
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 3.3e-17 91.7 86 58.1
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 7.4e-17 90.5 86 55.8
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 7.4e-17 90.5 86 57.0
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 7.4e-17 90.5 87 56.3
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 7.4e-17 90.5 86 55.8
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 7.4e-17 90.5 86 55.8
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 9.7e-17 90.1 86 57.0
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 9.7e-17 90.1 86 58.1
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.3e-16 89.7 86 57.0
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.3e-16 89.7 86 55.8
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.6e-16 89.4 85 57.6
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.2e-16 89.0 86 60.5
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 2.8e-16 88.6 85 58.8
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 2.8e-16 88.6 86 55.8
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.8e-16 88.6 86 59.3
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.8e-16 88.6 86 60.5
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 3.7e-16 88.2 87 56.3
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 3.7e-16 88.2 83 56.6
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 4.8e-16 87.8 94 52.1
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 8.2e-16 87.0 79 64.6
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.4e-15 86.3 85 51.8
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.8e-15 85.9 86 59.3
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 4.1e-15 84.7 83 55.4
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 6.9e-15 84.0 83 53.0
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 6.9e-15 84.0 83 59.0
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 9.0e-15 83.6 75 60.0
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.0e-14 82.4 79 54.4
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 2.6e-14 82.0 82 52.4
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 2.6e-14 82.0 86 53.5
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 4.5e-14 81.3 82 57.3
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.0e-13 80.1 82 52.4
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 2.9e-13 78.6 86 52.3
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 3.8e-13 78.2 66 54.5
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.1e-12 76.6 89 47.2
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.4e-12 76.3 41 95.1
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 5.5e-12 74.3 49 79.6
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.1e-09 66.6 86 46.5
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 9.7e-09 63.5 174 30.5
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 6.3e-08 60.8 55 60.0
SHI06100 Sapria himalayana HOM05D006634 ORTHO05D008282 8.2e-08 60.5 63 52.4
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.1e-07 60.1 46 67.4
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.4e-07 59.7 52 61.5
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 2.4e-07 58.9 42 71.4
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 9.1e-07 57.0 46 69.6
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 1.5e-06 56.2 91 37.4
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 3.4e-06 55.1 89 43.8


User provided reference genes

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