Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.6e-71 272.7 143 100.0
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 5.0e-65 251.1 143 91.6
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 1.4e-46 189.9 144 75.0
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 3.1e-43 178.7 144 72.2
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 2.3e-41 172.6 142 67.6
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 6.1e-39 164.5 94 85.1
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.7e-28 129.8 93 73.1
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.2e-28 129.4 93 73.1
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 1.8e-22 109.8 153 51.6
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 4.4e-21 105.1 98 57.1
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 4.9e-20 101.7 93 55.9
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.1e-19 100.5 154 44.2
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 2.1e-18 96.3 99 52.5
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.3e-17 93.6 95 53.7
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.3e-17 93.6 94 55.3
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 3.0e-17 92.4 82 61.0
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 5.0e-17 91.7 141 41.8
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 2.1e-15 86.3 91 45.1
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 6.2e-15 84.7 94 45.7
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 6.2e-15 84.7 99 46.5
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 8.1e-15 84.3 134 41.8
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 4.0e-14 82.0 136 41.9
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 4.0e-14 82.0 146 41.8
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 8.9e-14 80.9 127 39.4
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.5e-13 80.1 149 38.3
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 3.4e-13 79.0 134 38.8
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 3.4e-13 79.0 141 39.0
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 7.5e-13 77.8 155 37.4
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 7.5e-13 77.8 139 41.7
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 1.3e-12 77.0 88 45.5
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.7e-12 76.6 139 37.4
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 2.2e-12 76.3 148 36.5
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.9e-12 75.9 146 37.0
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 8.3e-12 74.3 87 48.3
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.9e-11 73.2 93 46.2
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.2e-10 70.5 135 40.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.2e-10 70.5 145 35.2
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 1.2e-10 70.5 104 38.5
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 2.7e-10 69.3 133 40.6
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 3.5e-10 68.9 98 37.8
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 4.6e-10 68.6 127 37.8
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 7.8e-10 67.8 69 47.8
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 7.8e-10 67.8 81 45.7
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.3e-09 67.0 143 38.5
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.7e-09 66.6 129 37.2
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 2.3e-09 66.2 72 47.2
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 2.3e-09 66.2 81 44.4
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 3.0e-09 65.9 148 32.4
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 3.0e-09 65.9 143 33.6
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.0e-09 65.9 137 36.5
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 3.0e-09 65.9 129 34.1
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 5.1e-09 65.1 140 36.4
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 5.1e-09 65.1 148 32.4
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 6.6e-09 64.7 124 36.3
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 6.6e-09 64.7 135 38.5
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 8.6e-09 64.3 92 38.0
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 1.1e-08 63.9 143 32.9
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 1.1e-08 63.9 101 40.6
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.5e-08 63.5 49 59.2
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.5e-08 63.5 73 46.6
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.5e-08 63.5 137 35.8
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 1.9e-08 63.2 128 37.5
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.5e-08 62.8 85 38.8
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 2.5e-08 62.8 151 32.5
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 3.3e-08 62.4 108 38.0
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 4.3e-08 62.0 85 38.8
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 4.3e-08 62.0 140 34.3
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 1.6e-07 60.1 112 40.2
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.6e-07 60.1 126 36.5
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 4.7e-07 58.5 74 39.2
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 6.2e-07 58.2 142 35.2
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 8.1e-07 57.8 154 33.1
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.1e-06 57.4 126 35.7
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 1.4e-06 57.0 134 32.1
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 1.8e-06 56.6 131 35.9
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 4.0e-06 55.5 85 36.5


User provided reference genes

Program Settings