Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000646g0100 Nicotiana tabacum HOM05D014920 ORTHO05D009802 2.9e-71 271.9 152 100.0
Nitab4.5_0002805g0110 Nicotiana tabacum HOM05D014920 ORTHO05D009802 9.0e-57 223.8 154 89.0
PGSC0003DMG400024516 Solanum tuberosum HOM05D014920 ORTHO05D009802 2.7e-29 132.5 155 63.9
CAN.G982.29 Capsicum annuum HOM05D000541 ORTHO05D000137 5.9e-24 114.8 145 66.2
Sopen03g033700 Solanum pennellii HOM05D014920 ORTHO05D009802 2.9e-23 112.5 163 60.1
Nitab4.5_0001432g0130 Nicotiana tabacum HOM05D014920 ORTHO05D009802 3.6e-21 105.5 158 59.5
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 4.7e-21 105.1 166 51.8
Nitab4.5_0004190g0010 Nicotiana tabacum HOM05D014920 ORTHO05D009802 1.2e-19 100.5 164 56.1
Peaxi162Scf00017g10317 Petunia axillaris HOM05D019957 ORTHO05D000707 9.2e-17 90.9 71 74.6
Solyc06g069340.1 Solanum lycopersicum HOM05D014920 ORTHO05D009802 3.5e-16 89.0 156 48.1
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 3.8e-15 85.5 164 40.2
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.9e-14 83.2 151 43.7
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.9e-14 83.2 151 43.7
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 2.5e-14 82.8 142 46.5
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 2.3e-12 76.3 154 40.9
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.0e-11 73.2 151 41.1
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.6e-11 72.8 151 40.4
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 8.3e-10 67.8 167 38.3
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 1.8e-09 66.6 158 39.2
ClCG06G015330 Citrullus lanatus HOM05D008563 ORTHO05D009802 5.9e-08 61.6 152 46.1
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 5.9e-08 61.6 155 37.4
Dinv36837 Davidia involucrata HOM05D008563 ORTHO05D009802 1.5e-06 57.0 147 46.3
Gorai.003G104300 Gossypium raimondii HOM05D008563 ORTHO05D009802 1.5e-06 57.0 158 37.3
Gohir.A03G072700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 3.3e-06 55.8 158 43.7
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 3.3e-06 55.8 151 36.4
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 4.3e-06 55.5 78 46.2
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 5.6e-06 55.1 165 40.6
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 5.6e-06 55.1 74 47.3
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 7.3e-06 54.7 74 47.3
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 7.3e-06 54.7 94 40.4
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 9.5e-06 54.3 162 41.4
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 9.5e-06 54.3 158 37.3
Prupe.5G211600 Prunus persica HOM05D008563 ORTHO05D009802 9.5e-06 54.3 74 59.5
QL10p021529 Quercus lobata HOM05D008563 ORTHO05D009802 9.5e-06 54.3 161 39.8


User provided reference genes

Program Settings