Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.4e-60 235.3 119 100.0
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.3e-53 213.0 119 94.1
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 4.3e-38 161.4 119 68.9
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 4.0e-36 154.8 102 83.3
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 1.5e-35 152.9 119 65.5
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 1.3e-31 139.8 119 62.2
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 7.9e-16 87.4 122 45.1
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 7.9e-16 87.4 123 48.0
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.0e-15 87.0 97 53.6
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 3.9e-15 85.1 92 52.2
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 1.1e-14 83.6 119 47.9
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 2.0e-14 82.8 101 51.5
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 2.5e-14 82.4 96 50.0
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 5.7e-14 81.3 105 48.6
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 2.2e-13 79.3 119 42.9
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 2.2e-13 79.3 74 60.8
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 2.2e-13 79.3 74 60.8
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 8.2e-13 77.4 75 56.0
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 1.4e-12 76.6 103 41.7
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 1.8e-12 76.3 62 59.7
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 2.4e-12 75.9 116 41.4
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 3.1e-12 75.5 80 48.8
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 3.1e-12 75.5 130 41.5
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 3.1e-12 75.5 96 50.0
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 4.1e-12 75.1 65 61.5
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 6.9e-12 74.3 74 58.1
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 6.9e-12 74.3 119 42.0
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 9.1e-12 73.9 65 60.0
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 1.2e-11 73.6 57 66.7
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 1.5e-11 73.2 90 48.9
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.5e-11 73.2 118 42.4
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 5.9e-11 71.2 61 62.3
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 5.9e-11 71.2 80 47.5
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 5.9e-11 71.2 80 47.5
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 5.9e-11 71.2 96 41.7
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 5.9e-11 71.2 66 56.1
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 7.7e-11 70.9 115 38.3
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 1.0e-10 70.5 120 41.7
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 1.3e-10 70.1 95 47.4
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 1.7e-10 69.7 122 40.2
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 1.7e-10 69.7 106 44.3
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 2.2e-10 69.3 128 39.1
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 2.2e-10 69.3 128 39.1
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 2.9e-10 68.9 77 49.4
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 2.9e-10 68.9 64 57.8
Aqoxy3G03839 Aquilegia oxysepala HOM05D007960 ORTHO05D010026 3.8e-10 68.6 81 53.1
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 5.0e-10 68.2 127 39.4
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 5.0e-10 68.2 127 39.4
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 5.0e-10 68.2 127 39.4
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 5.0e-10 68.2 55 67.3
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 6.5e-10 67.8 128 38.3
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 8.5e-10 67.4 94 46.8
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.1e-09 67.0 116 37.1
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 1.4e-09 66.6 123 37.4
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 4.2e-09 65.1 67 53.7
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 5.5e-09 64.7 122 38.5
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 7.2e-09 64.3 126 40.5
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 1.6e-08 63.2 85 44.7
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 1.6e-08 63.2 97 45.4
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 2.1e-08 62.8 71 43.7
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.7e-08 62.4 59 55.9
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.7e-08 62.4 59 55.9
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 4.7e-08 61.6 65 50.8
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 8.8e-07 57.4 64 50.0
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 1.1e-06 57.0 83 39.8
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 2.0e-06 56.2 84 39.3
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 2.6e-06 55.8 69 50.7
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 4.4e-06 55.1 82 43.9
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 7.4e-06 54.3 73 41.1


User provided reference genes

Program Settings