Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000642g0240 Nicotiana tabacum HOM05D001656 ORTHO05D003489 7.8e-103 377.1 186 100.0
Nitab4.5_0002875g0070 Nicotiana tabacum HOM05D001656 ORTHO05D003489 6.9e-83 310.8 157 96.8
CAN.G853.38 Capsicum annuum HOM05D001656 ORTHO05D003489 3.1e-75 285.4 168 86.3
Peaxi162Scf00017g02238 Petunia axillaris HOM05D001656 ORTHO05D003489 2.0e-74 282.7 157 89.2
PGSC0003DMG400024574 Solanum tuberosum HOM05D001656 ORTHO05D003489 4.5e-74 281.6 170 83.5
Sopen03g032680 Solanum pennellii HOM05D001656 ORTHO05D003489 1.7e-73 279.6 168 83.3
Solyc03g113640.4 Solanum lycopersicum HOM05D001656 ORTHO05D003489 7.1e-72 274.2 168 81.5
Actinidia23982 Actinidia chinensis HOM05D001656 ORTHO05D003489 5.5e-64 248.1 164 71.3
Dinv18177 Davidia involucrata HOM05D001656 ORTHO05D003489 7.2e-64 247.7 158 75.3
CSS0003613 Camellia sinensis var. sinensis HOM05D001656 ORTHO05D003489 1.6e-63 246.5 158 73.4
Actinidia11666 Actinidia chinensis HOM05D001656 ORTHO05D003489 1.8e-62 243.0 158 71.5
Rhsim01G0193900 Rhododendron simsii HOM05D001656 ORTHO05D003489 5.1e-62 241.5 164 71.3
MBI17_g13522_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D003489 1.1e-61 240.4 165 70.9
vmacro14265 Vaccinium macrocarpon HOM05D001656 ORTHO05D003489 7.4e-61 237.7 157 71.3
Migut.D01892 Erythranthe guttata HOM05D001656 ORTHO05D003489 1.7e-60 236.5 158 71.5
SGA_v2.0_scaffold114G31863 Striga asiatica HOM05D001656 ORTHO05D003489 2.2e-60 236.1 157 70.1
MSTRG.4393 Avicennia marina HOM05D001656 ORTHO05D003489 3.7e-60 235.3 157 72.0
Prupe.1G542900 Prunus persica HOM05D001656 ORTHO05D003489 1.4e-59 233.4 160 73.1
HanXRQChr11g0344231 Helianthus annuus HOM05D001656 ORTHO05D003489 1.8e-59 233.0 164 70.1
MD15G1398300 Malus domestica HOM05D001656 ORTHO05D003489 1.8e-59 233.0 150 76.7
CANSAT25G1280 Cannabis sativa HOM05D001656 ORTHO05D003489 4.1e-59 231.9 141 78.0
GSVIVG01029697001 Vitis vinifera HOM05D001656 ORTHO05D003489 5.3e-59 231.5 138 76.1
ECA248G3915 Erigeron canadensis HOM05D001656 ORTHO05D003489 6.9e-59 231.1 164 69.5
CSS0033770 Camellia sinensis var. sinensis HOM05D001656 ORTHO05D003489 2.6e-58 229.2 167 68.9
CiPaw.15G153400 Carya illinoinensis HOM05D001656 ORTHO05D003489 2.6e-58 229.2 152 72.4
TAR625G1477 Trochodendron aralioides HOM05D001656 ORTHO05D003489 1.3e-57 226.9 153 71.9
Cc04_g16130 Coffea canephora HOM05D001656 ORTHO05D003489 1.7e-57 226.5 164 67.1
Lsat_1_v5_gn_1_69641 Lactuca sativa HOM05D001656 ORTHO05D003489 2.9e-57 225.7 167 67.1
MD08G1211000 Malus domestica HOM05D001656 ORTHO05D003489 2.9e-57 225.7 160 70.6
Cfa020712 Carpinus fangiana HOM05D001656 ORTHO05D003489 6.5e-57 224.6 157 68.2
Duzib116G0138 Durio zibethinus HOM05D001656 ORTHO05D003489 1.1e-56 223.8 158 69.6
TWI36G0018 Tripterygium wilfordii HOM05D001656 ORTHO05D003489 1.1e-56 223.8 158 70.9
TWI56G0670 Tripterygium wilfordii HOM05D001656 ORTHO05D003489 1.4e-56 223.4 157 70.7
QL12p040546 Quercus lobata HOM05D001656 ORTHO05D003489 3.2e-56 222.2 145 73.1
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 7.2e-56 221.1 165 67.3
FAN04G0452 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.2e-55 220.3 165 67.9
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.2e-55 220.3 165 67.3
Aqoxy6G00378 Aquilegia oxysepala HOM05D001656 ORTHO05D003489 1.6e-55 219.9 157 68.8
PSO675G3868 Papaver somniferum HOM05D001656 ORTHO05D003489 2.1e-55 219.5 140 73.6
PSO541G1368 Papaver somniferum HOM05D001656 ORTHO05D003489 2.7e-55 219.2 140 72.9
unitig_744.g24393 Utricularia gibba HOM05D001656 ORTHO05D003489 3.6e-55 218.8 167 69.5
TAR250G0004 Trochodendron aralioides HOM05D001656 ORTHO05D003489 4.7e-55 218.4 135 77.0
Thecc.08G080200 Theobroma cacao HOM05D001656 ORTHO05D003489 6.1e-55 218.0 159 67.9
FvH4_5g33540 Fragaria vesca HOM05D001656 ORTHO05D003489 1.0e-54 217.2 165 67.3
Migut.I00076 Erythranthe guttata HOM05D001656 ORTHO05D003489 1.4e-54 216.9 159 66.0
Eucgr.F02184 Eucalyptus grandis HOM05D001656 ORTHO05D003489 1.4e-54 216.9 150 70.7
SalBow3G0204 Salvia bowleyana HOM05D001656 ORTHO05D003489 1.4e-54 216.9 161 66.5
Duzib093G0139 Durio zibethinus HOM05D001656 ORTHO05D003489 2.3e-54 216.1 158 68.4
Nn5g28753 Nelumbo nucifera HOM05D001656 ORTHO05D003489 3.0e-54 215.7 163 66.9
Atru.chr6.982 Acer truncatum HOM05D001656 ORTHO05D003489 5.1e-54 214.9 127 81.1
Gohir.D01G112700 Gossypium hirsutum HOM05D001656 ORTHO05D003489 5.1e-54 214.9 139 71.2
CsaV3_6G036010 Cucumis sativus L. HOM05D001656 ORTHO05D003489 8.8e-54 214.2 163 68.7
MELO3C026510.2 Cucumis melo HOM05D001656 ORTHO05D003489 1.5e-53 213.4 163 68.1
Sed0023766 Sechium edule HOM05D001656 ORTHO05D003489 1.5e-53 213.4 163 68.1
HPP92_009299 Vanilla planifolia HOM05D001656 ORTHO05D003489 2.0e-53 213.0 158 67.1
Gohir.A01G125100 Gossypium hirsutum HOM05D001656 ORTHO05D003489 2.6e-53 212.6 139 70.5
Gorai.002G137500 Gossypium raimondii HOM05D001656 ORTHO05D003489 2.6e-53 212.6 139 70.5
ClCG08G009120 Citrullus lanatus HOM05D001656 ORTHO05D003489 4.4e-53 211.8 163 68.1
Sc13g0010550 Simmondsia chinensis HOM05D001656 ORTHO05D003489 5.7e-53 211.5 165 62.4
Ciclev10000361m.g Citrus clementina HOM05D001656 ORTHO05D003489 7.4e-53 211.1 134 74.6
RcHm_v2.0_Chr7g0232361 Rosa chinensis HOM05D001656 ORTHO05D003489 7.4e-53 211.1 161 67.1
Phvul.001G063050 Phaseolus vulgaris HOM05D001656 ORTHO05D003489 9.7e-53 210.7 157 67.5
Gohir.D05G217800 Gossypium hirsutum HOM05D001656 ORTHO05D003489 1.7e-52 209.9 152 68.4
Gorai.009G224600 Gossypium raimondii HOM05D001656 ORTHO05D003489 1.7e-52 209.9 152 68.4
Medtr1g007420 Medicago truncatula HOM05D001656 ORTHO05D003489 1.7e-52 209.9 140 72.9
Gohir.A06G028500 Gossypium hirsutum HOM05D001656 ORTHO05D003489 2.2e-52 209.5 139 71.2
DCAR_005504 Daucus carota HOM05D001656 ORTHO05D003489 2.8e-52 209.1 142 71.8
Gohir.A05G214500 Gossypium hirsutum HOM05D001656 ORTHO05D003489 2.8e-52 209.1 191 59.7
VMungo0647G0957 Vigna mungo HOM05D001656 ORTHO05D003489 3.7e-52 208.8 157 66.9
Lalb_Chr11g0064671 Lupinus albus HOM05D001656 ORTHO05D003489 6.3e-52 208.0 150 68.7
Ciclev10000310m.g Citrus clementina HOM05D001656 ORTHO05D003489 8.2e-52 207.6 136 73.5
Glyma.17G191900 Glycine max HOM05D001656 ORTHO05D003489 1.4e-51 206.8 157 66.9
Atru.chr13.918 Acer truncatum HOM05D001656 ORTHO05D003489 1.2e-50 203.8 154 66.2
Gohir.D06G027300 Gossypium hirsutum HOM05D001656 ORTHO05D003489 1.5e-50 203.4 139 69.8
PGR031G1306 Punica granatum HOM05D001656 ORTHO05D003489 1.5e-50 203.4 141 73.0
Gohir.D06G026800 Gossypium hirsutum HOM05D001656 ORTHO05D003489 2.0e-50 203.0 139 69.8
Nn1g06077 Nelumbo nucifera HOM05D001656 ORTHO05D003489 2.0e-50 203.0 140 72.1
Gorai.010G030400 Gossypium raimondii HOM05D001656 ORTHO05D003489 3.5e-50 202.2 139 69.8
Manes.03G069648 Manihot esculenta HOM05D001656 ORTHO05D003489 5.9e-50 201.4 156 66.0
Cpa.g.sc160.10 Carica papaya HOM05D001656 ORTHO05D003489 7.7e-50 201.1 153 64.1
Lalb_Chr23g0269821 Lupinus albus HOM05D001656 ORTHO05D003489 2.9e-49 199.1 153 64.1
Sabra19G0088800 Salix brachista HOM05D001656 ORTHO05D003489 6.5e-49 198.0 131 72.5
Medtr4g094378 Medicago truncatula HOM05D001656 ORTHO05D003489 1.1e-48 197.2 158 60.1
Phvul.006G210700 Phaseolus vulgaris HOM05D001656 ORTHO05D003489 1.9e-48 196.4 165 59.4
Potri.019G077700 Populus trichocarpa HOM05D001656 ORTHO05D003489 1.9e-48 196.4 131 71.0
EL10Ac3g05154 Beta vulgaris HOM05D001656 ORTHO05D003489 4.2e-48 195.3 141 65.2
AUR62005970 Chenopodium quinoa HOM05D001656 ORTHO05D003489 4.2e-48 195.3 141 67.4
AUR62028100 Chenopodium quinoa HOM05D001656 ORTHO05D003489 4.2e-48 195.3 141 67.4
Lj1g0003271 Lotus japonicus HOM05D001656 ORTHO05D003489 5.5e-48 194.9 136 68.4
Glyma.08G077100 Glycine max HOM05D001656 ORTHO05D003489 7.2e-48 194.5 158 62.0
ATR0820G193 Amborella trichopoda HOM05D001656 ORTHO05D003489 9.4e-48 194.1 140 62.9
Os12g0164800 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D003489 2.1e-47 193.0 140 65.0
Zm00001eb407660 Zea mays HOM05D001656 ORTHO05D003489 2.7e-47 192.6 140 65.7
Glyma.04G088300 Glycine max HOM05D001656 ORTHO05D003489 3.6e-47 192.2 145 65.5
Phvul.002G204000 Phaseolus vulgaris HOM05D001656 ORTHO05D003489 4.7e-47 191.8 158 61.4
TPR.G12394 Trifolium pratense HOM05D001656 ORTHO05D003489 4.7e-47 191.8 138 65.9
CDE06G2450 Ceratophyllum demersum HOM05D001656 ORTHO05D003489 6.1e-47 191.4 136 67.6
Glyma.06G090300 Glycine max HOM05D001656 ORTHO05D003489 8.0e-47 191.0 145 63.4
Sabra13G0090300 Salix brachista HOM05D001656 ORTHO05D003489 1.0e-46 190.7 147 67.3
Psat2g123240 Pisum sativum HOM05D001656 ORTHO05D003489 1.8e-46 189.9 167 60.5
VMungo0540G0892 Vigna mungo HOM05D001656 ORTHO05D003489 3.0e-46 189.1 152 62.5
Ca_18321_v3 Cicer arietinum L. HOM05D001656 ORTHO05D003489 3.9e-46 188.7 158 58.9
Psat7g095680 Pisum sativum HOM05D001656 ORTHO05D003489 3.9e-46 188.7 158 58.2
SalBow5G0425 Salvia bowleyana HOM05D001656 ORTHO05D003489 1.1e-45 187.2 137 71.5
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.6e-45 186.0 158 60.1
Potri.013G104400 Populus trichocarpa HOM05D001656 ORTHO05D003489 2.6e-45 186.0 141 66.7
TPR.G23822 Trifolium pratense HOM05D001656 ORTHO05D003489 2.6e-45 186.0 159 59.1
Glyma.08G183400 Glycine max HOM05D001656 ORTHO05D003489 3.3e-45 185.7 151 60.3
VMungo0251G2951 Vigna mungo HOM05D001656 ORTHO05D003489 3.3e-45 185.7 158 60.8
VMungo1309G1010 Vigna mungo HOM05D001656 ORTHO05D003489 5.7e-45 184.9 165 57.0
Manes.18G053500 Manihot esculenta HOM05D001656 ORTHO05D003489 9.7e-45 184.1 157 61.8
Medtr3g110690 Medicago truncatula HOM05D001656 ORTHO05D003489 1.7e-44 183.3 138 64.5
CARHR010100 Cardamine hirsuta HOM05D001656 ORTHO05D003489 2.2e-44 183.0 131 67.9
Thhalv10006833m.g Eutrema salsugineum HOM05D001656 ORTHO05D003489 2.2e-44 183.0 141 63.8
Aa31LG2G10790 Aethionema arabicum HOM05D001656 ORTHO05D003489 3.7e-44 182.2 138 63.8
Carub.0002s0620 Capsella rubella HOM05D001656 ORTHO05D003489 3.7e-44 182.2 171 56.1
Glyma.15G049300 Glycine max HOM05D001656 ORTHO05D003489 3.7e-44 182.2 136 65.4
Lj4g0026988 Lotus japonicus HOM05D001656 ORTHO05D003489 4.8e-44 181.8 157 59.2
arahy.Tifrunner.gnm1.ann1.MCUW0T Arachis hypogaea HOM05D001656 ORTHO05D003489 6.3e-44 181.4 226 48.7
Lalb_Chr07g0189321 Lupinus albus HOM05D001656 ORTHO05D003489 6.3e-44 181.4 161 59.0
AL1G20690 Arabidopsis lyrata HOM05D001656 ORTHO05D003489 8.2e-44 181.0 131 67.2
AT1G58350 Arabidopsis thaliana HOM05D001656 ORTHO05D003489 8.2e-44 181.0 171 55.6
THA.LOC104816780 Tarenaya hassleriana HOM05D001656 ORTHO05D003489 1.1e-43 180.6 141 63.1
arahy.Tifrunner.gnm1.ann1.EW8P9I Arachis hypogaea HOM05D001656 ORTHO05D003489 1.4e-43 180.3 230 47.4
BcaC07g41848 Brassica carinata HOM05D001656 ORTHO05D003489 2.4e-43 179.5 160 56.2
BolC8t52452H Brassica oleracea HOM05D001656 ORTHO05D003489 2.4e-43 179.5 160 56.2
Sp1g08640 Schrenkiella parvula HOM05D001656 ORTHO05D003489 3.1e-43 179.1 160 55.0
Hund09724 Selenicereus undatus HOM05D001656 ORTHO05D003489 5.3e-43 178.3 194 49.5
THA.LOC104820058 Tarenaya hassleriana HOM05D001656 ORTHO05D003489 9.1e-43 177.6 131 66.4
Lalb_Chr18g0060791 Lupinus albus HOM05D001656 ORTHO05D003489 1.6e-42 176.8 142 63.4
AL2G17870 Arabidopsis lyrata HOM05D001656 ORTHO05D003489 2.0e-42 176.4 171 55.0
Ca_00099_v3 Cicer arietinum L. HOM05D001656 ORTHO05D003489 2.0e-42 176.4 165 54.5
AT1G09980 Arabidopsis thaliana HOM05D001656 ORTHO05D003489 2.6e-42 176.0 157 56.7
A09p65220 Brassica napus HOM05D001656 ORTHO05D003489 2.6e-42 176.0 141 61.7
BraA09t41867Z Brassica rapa HOM05D001656 ORTHO05D003489 2.6e-42 176.0 141 61.7
C08p49170 Brassica napus HOM05D001656 ORTHO05D003489 5.9e-42 174.9 160 55.6
Carub.0001s0941 Capsella rubella HOM05D001656 ORTHO05D003489 7.7e-42 174.5 160 55.6
C09p22870 Brassica napus HOM05D001656 ORTHO05D003489 1.0e-41 174.1 162 54.9
BolC9t55207H Brassica oleracea HOM05D001656 ORTHO05D003489 1.0e-41 174.1 162 54.9
BcaC04g22145 Brassica carinata HOM05D001656 ORTHO05D003489 1.3e-41 173.7 161 55.3
A09p18330 Brassica napus HOM05D001656 ORTHO05D003489 1.3e-41 173.7 157 56.7
BraA09t37464Z Brassica rapa HOM05D001656 ORTHO05D003489 1.3e-41 173.7 149 59.1
Lj6g0015393 Lotus japonicus HOM05D001656 ORTHO05D003489 1.7e-41 173.3 139 62.6
Manes.05G186300 Manihot esculenta HOM05D001656 ORTHO05D003489 1.7e-41 173.3 157 56.1
Sp2g05240 Schrenkiella parvula HOM05D001656 ORTHO05D003489 6.5e-41 171.4 161 57.1
SEGI_30798 Sequoiadendron giganteum HOM05D001656 ORTHO05D003489 1.1e-40 170.6 151 57.6
Thhalv10023308m.g Eutrema salsugineum HOM05D001656 ORTHO05D003489 3.2e-40 169.1 151 57.6
Aa31LG1G4900 Aethionema arabicum HOM05D001656 ORTHO05D003489 4.2e-40 168.7 162 52.5
A06p06680 Brassica napus HOM05D001656 ORTHO05D003489 7.2e-40 167.9 158 52.5
BcaC05g24823 Brassica carinata HOM05D001656 ORTHO05D003489 1.6e-39 166.8 158 51.9
Phvul.009G113900 Phaseolus vulgaris HOM05D001656 ORTHO05D003489 2.7e-39 166.0 120 65.8
C05p08150 Brassica napus HOM05D001656 ORTHO05D003489 1.4e-38 163.7 158 51.9
BolC5t29567H Brassica oleracea HOM05D001656 ORTHO05D003489 1.4e-38 163.7 158 51.9
BraA06t23882Z Brassica rapa HOM05D001656 ORTHO05D003489 2.3e-38 162.9 158 51.3
Zm00001eb202450 Zea mays HOM05D001656 ORTHO05D003489 2.0e-37 159.8 150 55.3
arahy.Tifrunner.gnm1.ann1.0H8WKK Arachis hypogaea HOM05D001656 ORTHO05D003489 2.6e-37 159.5 160 55.0
arahy.Tifrunner.gnm1.ann1.AB9876 Arachis hypogaea HOM05D001656 ORTHO05D003489 5.7e-37 158.3 177 50.8
Gohir.D06G025900 Gossypium hirsutum HOM05D001656 ORTHO05D003489 1.2e-31 140.6 99 67.7
Oeu041590.1 Olea europaea HOM05D001656 ORTHO05D003489 1.6e-31 140.2 106 65.1
Ca_03352_v3 Cicer arietinum L. HOM05D001656 ORTHO05D003489 2.1e-31 139.8 105 67.6
TPR.G24499 Trifolium pratense HOM05D001656 ORTHO05D003489 6.1e-31 138.3 182 46.2
Lsat_1_v5_gn_5_90280 Lactuca sativa HOM05D001656 ORTHO05D003489 6.8e-30 134.8 175 45.1
GSVIVG01014971001 Vitis vinifera HOM05D001656 ORTHO05D003489 7.5e-29 131.3 109 56.9
Ca_15557_v3 Cicer arietinum L. HOM05D001656 ORTHO05D003489 1.7e-25 120.2 80 68.8
AagrBONN_evm.TU.Sc2ySwM_362.276 Anthoceros agrestis HOM05D001656 ORTHO05D003489 2.9e-25 119.4 131 48.9
SMO353G0380 Selaginella moellendorffii HOM05D001656 ORTHO05D003489 1.2e-23 114.0 123 47.2
COL.COLO4_35358 Corchorus olitorius HOM05D001656 ORTHO05D003489 1.0e-22 110.9 79 65.8
CBR_g50209 Chara braunii HOM05D001656 ORTHO05D003489 4.1e-19 99.0 158 34.8
Haze_19010 Corylus avellana HOM05D001656 ORTHO05D003489 5.4e-19 98.6 52 82.7
Cpa.g.sc2.37 Carica papaya HOM05D001656 ORTHO05D003489 5.0e-17 92.0 83 55.4
Ah.07g204550 Amaranthus hybridus HOM05D001656 ORTHO05D003489 7.3e-16 88.2 65 63.1
Gohir.D06G026833 Gossypium hirsutum HOM05D001656 ORTHO05D003489 9.5e-16 87.8 53 71.7
Cpa.g.sc2.34 Carica papaya HOM05D001656 ORTHO05D003489 1.4e-14 84.0 51 68.6
SHI20938 Sapria himalayana HOM05D001656 ORTHO05D003489 1.8e-14 83.6 48 77.1
Lsat_1_v5_gn_1_25940 Lactuca sativa HOM05D001656 ORTHO05D003489 5.8e-13 78.6 82 50.0
arahy.Tifrunner.gnm1.ann1.G0H17A Arachis hypogaea HOM05D001656 ORTHO05D003489 1.0e-09 67.8 107 36.4
SHI20937 Sapria himalayana HOM05D001656 ORTHO05D003489 7.3e-08 61.6 64 48.4


User provided reference genes

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