Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000636g0110 Nicotiana tabacum HOM05D000141 ORTHO05D011930 2.6e-59 231.9 121 100.0
Nitab4.5_0007721g0030 Nicotiana tabacum HOM05D000141 ORTHO05D000780 1.5e-54 216.1 121 94.2
Peaxi162Scf00130g00518 Petunia axillaris HOM05D000141 ORTHO05D000780 2.9e-50 201.8 120 86.7
Sopen04g008170 Solanum pennellii HOM05D000141 ORTHO05D000780 3.5e-43 178.3 117 79.5
Solyc04g016080.2 Solanum lycopersicum HOM05D000141 ORTHO05D000780 7.7e-43 177.2 117 79.5
CAN.G2301.2 Capsicum annuum HOM05D000141 ORTHO05D011930 1.5e-41 172.9 118 82.2
CAN.G1237.15 Capsicum annuum HOM05D000141 ORTHO05D000780 3.2e-41 171.8 118 82.2
CAN.G182.1 Capsicum annuum HOM05D000141 ORTHO05D000780 1.4e-39 166.4 118 80.5
CAN.G182.2 Capsicum annuum HOM05D000141 ORTHO05D000780 1.4e-39 166.4 118 80.5
CAN.G7886.1 Capsicum annuum HOM05D000141 ORTHO05D011930 7.5e-38 160.6 118 79.7
CAN.G2052.3 Capsicum annuum HOM05D000141 ORTHO05D011930 1.4e-36 156.4 112 79.5
CAN.G2478.1 Capsicum annuum HOM05D000141 ORTHO05D011930 7.0e-36 154.1 104 82.7
CAN.G182.3 Capsicum annuum HOM05D000141 ORTHO05D011930 1.2e-35 153.3 104 82.7
PGSC0003DMG400027257 Solanum tuberosum HOM05D000141 ORTHO05D000780 3.5e-35 151.8 102 80.4
CAN.G4746.2 Capsicum annuum HOM05D000141 ORTHO05D011930 5.9e-35 151.0 104 81.7
CAN.G9568.1 Capsicum annuum HOM05D000141 ORTHO05D011930 7.8e-35 150.6 118 75.4
CAN.G1784.8 Capsicum annuum HOM05D000141 ORTHO05D011930 1.3e-34 149.8 105 81.9
CAN.G2032.1 Capsicum annuum HOM05D000141 ORTHO05D000780 6.6e-34 147.5 103 80.6
CAN.G2301.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.5e-33 146.4 118 73.7
CAN.G12411.1 Capsicum annuum HOM05D000141 ORTHO05D011930 3.3e-33 145.2 98 84.7
CAN.G1784.5 Capsicum annuum HOM05D000141 ORTHO05D011930 3.0e-31 138.7 103 76.7
CAN.G4150.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.6e-27 126.3 89 80.9
Cc06_g17730 Coffea canephora HOM05D000141 ORTHO05D000780 7.8e-27 124.0 124 59.7
CAN.G2478.4 Capsicum annuum HOM05D000141 ORTHO05D011930 2.5e-25 119.0 85 80.0
MD14G1074400 Malus domestica HOM05D000141 ORTHO05D000780 8.0e-24 114.0 125 56.8
SalBow6G3399 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.8e-23 112.8 122 61.5
SalBow6G3691 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.8e-23 112.8 122 61.5
Prupe.7G055800 Prunus persica HOM05D000141 ORTHO05D000780 3.4e-22 108.6 126 54.8
QL05p062269 Quercus lobata HOM05D000141 ORTHO05D000780 5.8e-22 107.8 119 58.8
MD12G1076000 Malus domestica HOM05D000141 ORTHO05D000780 9.8e-22 107.1 118 55.9
QL07p001610 Quercus lobata HOM05D000141 ORTHO05D000780 1.7e-21 106.3 117 58.1
Oeu062943.1 Olea europaea HOM05D000141 ORTHO05D000780 2.9e-21 105.5 105 61.9
QL07p001657 Quercus lobata HOM05D000141 ORTHO05D011930 3.7e-21 105.1 117 57.3
CAN.G676.23 Capsicum annuum HOM05D000141 ORTHO05D000780 1.1e-20 103.6 79 77.2
AUR62024474 Chenopodium quinoa HOM05D000141 ORTHO05D000780 1.1e-20 103.6 113 54.9
CiPaw.09G039400 Carya illinoinensis HOM05D000141 ORTHO05D000780 7.0e-20 100.9 112 58.0
Hund24692 Selenicereus undatus HOM05D000141 ORTHO05D000780 7.0e-20 100.9 121 53.7
RcHm_v2.0_Chr3g0483041 Rosa chinensis HOM05D000141 ORTHO05D000780 4.6e-19 98.2 122 53.3
CSS0002874 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 6.0e-19 97.8 114 51.8
Haze_19824 Corylus avellana HOM05D000141 ORTHO05D000780 7.8e-19 97.4 129 49.6
Haze_19829 Corylus avellana HOM05D000141 ORTHO05D000780 7.8e-19 97.4 129 49.6
Oeu033013.1 Olea europaea HOM05D000141 ORTHO05D000780 1.3e-18 96.7 120 51.7
GSVIVG01033252001 Vitis vinifera HOM05D000141 ORTHO05D000780 1.3e-18 96.7 111 52.3
CSS0015830 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 1.7e-18 96.3 114 50.9
TAR369G0815 Trochodendron aralioides HOM05D000141 ORTHO05D011930 1.7e-18 96.3 121 50.4
CSS0021973 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 2.3e-18 95.9 114 50.9
Manes.08G053050 Manihot esculenta HOM05D000141 ORTHO05D000780 3.9e-18 95.1 127 48.8
Sabra06G0033900 Salix brachista HOM05D000141 ORTHO05D000780 3.9e-18 95.1 97 55.7
Dinv39627 Davidia involucrata HOM05D000141 ORTHO05D011930 5.0e-18 94.7 108 54.6
Potri.006G048600 Populus trichocarpa HOM05D000141 ORTHO05D000780 1.9e-17 92.8 120 49.2
FAN09G2894 Fragaria x ananassa HOM05D000141 ORTHO05D000780 3.3e-17 92.0 122 53.3
TPR.G18240 Trifolium pratense HOM05D000141 ORTHO05D000780 3.3e-17 92.0 105 54.3
AUR62026063 Chenopodium quinoa HOM05D000141 ORTHO05D000780 1.2e-16 90.1 113 52.2
Hma1.2p1_0788F.1_g218060 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 1.2e-16 90.1 108 50.9
Aqoxy2G00217 Aquilegia oxysepala HOM05D000141 ORTHO05D000780 2.1e-16 89.4 112 53.6
Carub.0003s0949 Capsella rubella HOM05D000141 ORTHO05D000780 2.1e-16 89.4 120 46.7
FvH4_6g24140 Fragaria vesca HOM05D000141 ORTHO05D000780 2.8e-16 89.0 123 51.2
AL3G21640 Arabidopsis lyrata HOM05D000141 ORTHO05D000780 4.7e-16 88.2 114 50.0
Eucgr.A02334 Eucalyptus grandis HOM05D000141 ORTHO05D000780 6.2e-16 87.8 117 52.1
Sp3g08570 Schrenkiella parvula HOM05D000141 ORTHO05D000780 6.2e-16 87.8 116 50.0
FAN14G3678 Fragaria x ananassa HOM05D000141 ORTHO05D000780 8.1e-16 87.4 116 52.6
Medtr7g091290 Medicago truncatula HOM05D000141 ORTHO05D000780 1.1e-15 87.0 118 51.7
AT3G10310 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 1.4e-15 86.7 115 49.6
Lj2C386T5 Lonicera japonica HOM05D000141 ORTHO05D000780 1.4e-15 86.7 103 55.3
SGA_v2.0_scaffold105G30398 Striga asiatica HOM05D000141 ORTHO05D000780 1.4e-15 86.7 115 53.9
TWI53G1155 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 1.4e-15 86.7 120 50.8
PGR004G2467 Punica granatum HOM05D000141 ORTHO05D000780 3.1e-15 85.5 125 49.6
Lj1g0025747 Lotus japonicus HOM05D000141 ORTHO05D000780 4.0e-15 85.1 103 53.4
Thhalv10019993m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 5.2e-15 84.7 116 49.1
Rhsim04G0102700 Rhododendron simsii HOM05D000141 ORTHO05D000780 6.8e-15 84.3 88 58.0
Aa31LG3G2890 Aethionema arabicum HOM05D000141 ORTHO05D000780 8.9e-15 84.0 122 49.2
Psat3g073920 Pisum sativum HOM05D000141 ORTHO05D000780 8.9e-15 84.0 115 50.4
Sc19g0006580 Simmondsia chinensis HOM05D000141 ORTHO05D000780 1.2e-14 83.6 119 47.1
THA.LOC104816416 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 1.2e-14 83.6 103 51.5
Sed0021099 Sechium edule HOM05D000141 ORTHO05D000780 1.5e-14 83.2 122 43.4
C05p57860 Brassica napus HOM05D000141 ORTHO05D000780 3.4e-14 82.0 117 47.9
BolC5t34441H Brassica oleracea HOM05D000141 ORTHO05D000780 3.4e-14 82.0 117 47.9
CSS0022619 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 4.4e-14 81.6 114 45.6
CAN.G7460.1 Capsicum annuum HOM05D000141 ORTHO05D011930 4.4e-14 81.6 57 84.2
MELO3C020742.2 Cucumis melo HOM05D000141 ORTHO05D000780 4.4e-14 81.6 123 47.2
THA.LOC104804702 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 7.5e-14 80.9 121 47.1
TWI74G1537 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 7.5e-14 80.9 120 53.3
COL.COLO4_20030 Corchorus olitorius HOM05D000141 ORTHO05D000780 9.8e-14 80.5 100 53.0
CsaV3_4G022100 Cucumis sativus L. HOM05D000141 ORTHO05D000780 9.8e-14 80.5 123 45.5
Glyma.03G134900 Glycine max HOM05D000141 ORTHO05D000780 9.8e-14 80.5 107 51.4
Migut.J01742 Erythranthe guttata HOM05D000141 ORTHO05D000780 1.7e-13 79.7 108 53.7
A05p38830 Brassica napus HOM05D000141 ORTHO05D000780 2.2e-13 79.3 115 46.1
BraA05t22674Z Brassica rapa HOM05D000141 ORTHO05D000780 2.2e-13 79.3 115 46.1
Glyma.19G137500 Glycine max HOM05D000141 ORTHO05D000780 2.2e-13 79.3 110 47.3
PSO339G3992 Papaver somniferum HOM05D000141 ORTHO05D000780 2.2e-13 79.3 110 50.9
BcaNung06563 Brassica carinata HOM05D000141 ORTHO05D000780 2.9e-13 79.0 118 49.2
arahy.Tifrunner.gnm1.ann1.SFU112 Arachis hypogaea HOM05D000141 ORTHO05D000780 3.7e-13 78.6 113 47.8
CSS0033447 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 3.7e-13 78.6 103 47.6
Lalb_Chr20g0110611 Lupinus albus HOM05D000141 ORTHO05D000780 4.9e-13 78.2 112 47.3
Ciclev10004492m.g Citrus clementina HOM05D000141 ORTHO05D000780 6.4e-13 77.8 123 48.8
arahy.Tifrunner.gnm1.ann1.JU456M Arachis hypogaea HOM05D000141 ORTHO05D000780 8.3e-13 77.4 117 46.2
Ca_08441_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 8.3e-13 77.4 99 52.5
Nn2g15186 Nelumbo nucifera HOM05D000141 ORTHO05D000780 1.4e-12 76.6 113 47.8
BcaC05g29478 Brassica carinata HOM05D000141 ORTHO05D000780 1.9e-12 76.3 141 42.6
Zm00001eb122340 Zea mays HOM05D000141 ORTHO05D000780 2.4e-12 75.9 102 49.0
PSO384G5070 Papaver somniferum HOM05D000141 ORTHO05D000780 4.1e-12 75.1 110 48.2
Duzib106G2056 Durio zibethinus HOM05D000141 ORTHO05D000780 5.4e-12 74.7 101 49.5
CAN.G778.7 Capsicum annuum HOM05D000141 ORTHO05D000780 1.2e-11 73.6 49 77.6
Thecc.05G150300 Theobroma cacao HOM05D000141 ORTHO05D000780 1.2e-11 73.6 100 51.0
Lalb_Chr25g0287241 Lupinus albus HOM05D000141 ORTHO05D000780 1.6e-11 73.2 108 44.4
DCAR_013606 Daucus carota HOM05D000141 ORTHO05D000780 2.7e-11 72.4 120 42.5
CARHR084790 Cardamine hirsuta HOM05D000141 ORTHO05D000780 3.5e-11 72.0 113 47.8
ECA236G0558 Erigeron canadensis HOM05D000141 ORTHO05D000780 6.0e-11 71.2 116 45.7
Os01g0243100 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D000780 1.3e-10 70.1 122 44.3
BolC3t16679H Brassica oleracea HOM05D000141 ORTHO05D000780 2.5e-09 65.9 104 49.0
Gohir.A01G192600 Gossypium hirsutum HOM05D000141 ORTHO05D000780 5.6e-09 64.7 102 45.1
Phvul.001G130300 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 5.6e-09 64.7 115 43.5
FAN05G1533 Fragaria x ananassa HOM05D000141 ORTHO05D000780 7.3e-09 64.3 85 49.4
Gorai.002G226000 Gossypium raimondii HOM05D000141 ORTHO05D000780 1.6e-08 63.2 102 44.1
VMungo1383G0247 Vigna mungo HOM05D000141 ORTHO05D000780 6.2e-08 61.2 114 41.2
Actinidia17233 Actinidia chinensis HOM05D000141 ORTHO05D000780 8.1e-08 60.8 75 54.7
HanXRQChr10g0283351 Helianthus annuus HOM05D000141 ORTHO05D000780 1.4e-07 60.1 115 41.7
Gohir.D01G177200 Gossypium hirsutum HOM05D000141 ORTHO05D000780 1.8e-07 59.7 102 43.1
GSVIVG01002093001 Vitis vinifera HOM05D031085 ORTHO05D030729 4.0e-07 58.5 66 50.0
CAN.G1784.4 Capsicum annuum HOM05D000141 ORTHO05D000780 5.2e-07 58.2 43 74.4
Lsat_1_v5_gn_8_81540 Lactuca sativa HOM05D000141 ORTHO05D000780 2.0e-06 56.2 119 40.3


User provided reference genes

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