Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 0.0e+00 2361.3 1178 100.0
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 0.0e+00 2234.5 1229 92.4
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 0.0e+00 1654.4 1214 70.1
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 0.0e+00 1648.6 1215 70.3
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 0.0e+00 1506.9 1237 66.2
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 0.0e+00 1415.6 992 73.9
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.0e-304 1050.4 1285 47.5
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 3.2e-303 1045.4 1320 47.5
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 7.2e-303 1044.3 1326 47.1
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 1.2e-302 1043.5 1276 47.5
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 3.6e-302 1042.0 1264 48.2
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 8.8e-293 1010.7 1240 47.6
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 1.1e-290 1003.8 1248 47.3
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.6e-286 989.9 1298 47.0
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 2.0e-284 983.0 1275 45.3
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.3e-283 980.3 1275 45.2
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 1.7e-283 979.9 1255 46.4
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.1e-282 977.2 1274 45.2
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 5.9e-281 971.5 1274 45.8
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.1e-279 967.2 1286 44.7
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 2.5e-279 966.1 1281 45.0
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 8.0e-278 961.1 1253 44.9
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 4.4e-276 955.3 1327 42.4
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 5.8e-276 954.9 1268 44.2
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 1.3e-275 953.7 1276 45.1
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 6.4e-275 951.4 1265 44.6
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 8.3e-275 951.0 1255 45.3
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 7.0e-274 948.0 1308 43.8
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 2.7e-273 946.0 1197 46.6
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 1.3e-272 943.7 1226 46.6
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 2.3e-272 943.0 1273 44.9
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 3.6e-270 935.6 1332 43.5
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 6.8e-269 931.4 1250 44.6
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 3.9e-264 915.6 1246 43.7
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 3.1e-261 906.0 1273 44.2
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 5.8e-260 901.7 1265 43.6
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 4.9e-259 898.7 1021 49.0
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 8.4e-259 897.9 1251 43.3
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 1.9e-258 896.7 1259 43.8
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 2.8e-254 882.9 1183 43.6
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 6.2e-254 881.7 1280 41.5
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 2.1e-246 856.7 1263 39.4
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 6.4e-243 845.1 1270 41.2
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 7.1e-242 841.6 1457 39.1
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 7.9e-241 838.2 1274 42.2
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 1.9e-239 833.6 1304 40.9
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 1.3e-238 830.9 1243 41.4
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 2.1e-238 830.1 1239 41.3
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 1.1e-237 827.8 1243 41.2
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 1.5e-236 823.9 947 50.1
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 3.0e-232 809.7 1134 43.2
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 1.4e-229 800.8 1228 41.2
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.8e-229 800.4 1292 38.8
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 1.2e-228 797.7 1207 41.8
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 3.5e-225 786.2 1271 39.7
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 1.8e-224 783.9 1090 42.9
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 2.5e-223 780.0 1265 39.5
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 1.6e-217 760.8 1262 39.7
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 5.5e-202 709.1 776 48.1
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 3.9e-200 703.0 851 48.2
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 1.5e-199 701.0 1213 38.4
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 2.0e-199 700.7 832 47.0
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 3.3e-199 699.9 1218 38.1
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 3.1e-197 693.3 845 46.4
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 7.7e-196 688.7 1212 37.5
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 7.7e-196 688.7 1213 37.5
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 6.5e-195 685.6 1211 37.6
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 7.2e-194 682.2 1220 37.8
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 1.6e-193 681.0 1212 37.9
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 2.1e-193 680.6 1211 37.5
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 2.0e-191 674.1 1215 37.5
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 7.0e-189 665.6 1238 35.6
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 1.8e-184 651.0 1073 40.6
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 2.9e-166 590.5 874 42.4
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 4.9e-166 589.7 819 42.5
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.1e-165 588.6 1439 31.9
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 1.6e-161 574.7 1194 35.1
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 4.0e-160 570.1 1061 37.4
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 2.6e-151 540.8 905 38.8
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 5.4e-149 533.1 579 48.9
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 7.9e-124 449.5 747 38.4
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.3e-123 448.7 328 72.3
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 6.9e-120 436.4 1321 28.1
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 2.0e-119 434.9 759 35.4
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 4.6e-116 423.7 924 31.9
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 1.5e-114 418.7 371 58.8
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 4.6e-108 397.1 368 57.1
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 1.0e-107 396.0 370 56.8
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 1.1e-106 392.5 884 34.0
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 4.1e-104 384.0 377 54.6
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 1.3e-99 369.0 385 50.4
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 4.2e-93 347.4 875 31.7
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 1.4e-91 342.4 326 54.6
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 5.1e-91 340.5 482 43.6
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 7.4e-82 310.1 404 43.6
CAN.G1820.3 Capsicum annuum HOM05D005395 ORTHO05D006352 2.8e-81 308.1 202 74.8
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 6.3e-73 280.4 354 45.5
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.4e-72 279.3 271 54.2
Lalb_Chr13g0291131 Lupinus albus HOM05D005395 ORTHO05D006352 6.8e-67 260.4 441 39.9
Hma1.2p1_0293F.1_g116180 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 1.7e-65 255.8 318 47.2
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 9.5e-61 240.0 345 41.2
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 9.5e-61 240.0 345 41.2
Dinv12038 Davidia involucrata HOM05D005395 ORTHO05D006352 2.3e-59 235.3 197 60.9
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 4.4e-58 231.1 258 48.4
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 3.1e-56 224.9 438 34.5
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 1.6e-55 222.6 999 25.1
Lj7P570T32 Lonicera japonica HOM05D005395 ORTHO05D006352 1.3e-49 203.0 187 57.2
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 1.6e-47 196.1 232 43.5
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.2e-42 179.9 553 27.3
Nitab4.5_0002179g0020 Nicotiana tabacum HOM05D005395 ORTHO05D006352 3.5e-39 168.3 133 72.2
CDE07G0235 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 6.0e-39 167.5 285 37.2
SEGI_09183 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.1e-37 163.3 292 36.0
BcaC04g18840 Brassica carinata HOM05D005395 ORTHO05D006352 3.4e-34 151.8 286 36.0
Nitab4.5_0002179g0030 Nicotiana tabacum HOM05D005395 ORTHO05D006352 8.3e-33 147.1 93 80.6
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 1.6e-31 142.9 192 42.2
Cpa.g.sc245.13 Carica papaya HOM05D005395 ORTHO05D006352 1.3e-30 139.8 147 49.7
ATR0829G203 Amborella trichopoda HOM05D005395 ORTHO05D006352 4.3e-29 134.8 192 38.5
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 3.1e-27 128.6 185 41.1
CDE07G1503 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 2.1e-23 115.9 140 40.7
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 4.6e-23 114.8 359 26.7
Os12g0293100 Oryza sativa ssp. japonica HOM05D005395 ORTHO05D006352 3.6e-20 105.1 318 31.4
Lsat_1_v5_gn_3_2761 Lactuca sativa HOM05D005395 ORTHO05D006352 1.5e-18 99.8 353 29.7
Ca_14375_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 5.8e-18 97.8 339 30.4
CSS0040942 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 6.4e-17 94.4 82 56.1
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 3.5e-15 88.6 101 41.6
SEGI_37340 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 6.6e-14 84.3 150 31.3
CSS0036458 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 7.3e-13 80.9 82 51.2
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 2.1e-12 79.3 80 47.5
CSS0041236 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 2.8e-12 79.0 82 50.0
QL02p026296 Quercus lobata HOM05D005395 ORTHO05D006352 5.8e-10 71.2 92 42.4
SHI19146 Sapria himalayana HOM05D005395 ORTHO05D002065 7.6e-10 70.9 93 44.1
BcaC06g35111 Brassica carinata HOM05D020491 ORTHO05D006352 8.4e-09 67.4 85 42.4
CSS0042886 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 1.9e-08 66.2 82 43.9
CDE07G0311 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 2.1e-07 62.8 69 44.9
vmacro13662 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 2.1e-07 62.8 215 32.1
Dinv18440 Davidia involucrata HOM05D005395 ORTHO05D006352 6.0e-07 61.2 48 60.4
DCAR_005448 Daucus carota HOM05D005395 ORTHO05D006352 5.1e-06 58.2 93 38.7
DCAR_024213 Daucus carota HOM05D005395 ORTHO05D006352 5.1e-06 58.2 93 37.6


User provided reference genes

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