Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000624g0070 Nicotiana tabacum HOM05D002646 ORTHO05D002782 4.7e-55 217.6 110 100.0
PGSC0003DMG400014782 Solanum tuberosum HOM05D002646 ORTHO05D002782 7.3e-16 87.4 47 87.2
Lj5g0008895 Lotus japonicus HOM05D002646 ORTHO05D002782 5.2e-14 81.3 59 61.0
CDE05G0187 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 2.0e-13 79.3 57 61.4
Nitab4.5_0004768g0020 Nicotiana tabacum HOM05D002646 ORTHO05D002782 7.6e-13 77.4 58 72.4
Nitab4.5_0000017g0180 Nicotiana tabacum HOM05D002646 ORTHO05D002782 2.2e-12 75.9 58 70.7
Solyc07g025230.2 Solanum lycopersicum HOM05D002646 ORTHO05D002782 2.2e-12 75.9 61 68.9
Sopen07g013020 Solanum pennellii HOM05D002646 ORTHO05D002782 2.2e-12 75.9 61 68.9
Sopen07g013050 Solanum pennellii HOM05D002646 ORTHO05D002782 2.2e-12 75.9 61 68.9
PGSC0003DMG400005374 Solanum tuberosum HOM05D002646 ORTHO05D002782 2.2e-12 75.9 61 68.9
Solyc07g025200.1 Solanum lycopersicum HOM05D002646 ORTHO05D002782 4.9e-12 74.7 61 67.2
Peaxi162Scf00258g00024 Petunia axillaris HOM05D002646 ORTHO05D002782 1.1e-11 73.6 61 63.9
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 2.4e-11 72.4 59 64.4
CAN.G424.59 Capsicum annuum HOM05D002646 ORTHO05D002782 4.2e-11 71.6 61 65.6
Dinv39431 Davidia involucrata HOM05D002646 ORTHO05D002782 1.7e-09 66.2 110 41.8
QL02p008978 Quercus lobata HOM05D002646 ORTHO05D002782 3.9e-09 65.1 120 34.2
Nn7g35815 Nelumbo nucifera HOM05D002646 ORTHO05D002782 5.1e-09 64.7 61 59.0
HPP92_001656 Vanilla planifolia HOM05D002646 ORTHO05D002782 6.6e-09 64.3 61 52.5
Lsat_1_v5_gn_5_28001 Lactuca sativa HOM05D002646 ORTHO05D002782 3.3e-08 62.0 96 38.5
MD03G1139500 Malus domestica HOM05D002646 ORTHO05D002782 3.3e-08 62.0 60 58.3
MD11G1162400 Malus domestica HOM05D002646 ORTHO05D002782 4.3e-08 61.6 97 40.2
Glyma.09G268500 Glycine max HOM05D002646 ORTHO05D002782 7.3e-08 60.8 59 50.8
GSVIVG01009725001 Vitis vinifera HOM05D002646 ORTHO05D002782 7.3e-08 60.8 60 51.7
Duzib041G0261 Durio zibethinus HOM05D002646 ORTHO05D002782 9.6e-08 60.5 66 54.5
Oeu007022.1 Olea europaea HOM05D002646 ORTHO05D002782 9.6e-08 60.5 100 37.0
Atru.chr13.450 Acer truncatum HOM05D002646 ORTHO05D002782 1.3e-07 60.1 109 33.0
Sabra05G0176100 Salix brachista HOM05D002646 ORTHO05D002782 1.6e-07 59.7 118 35.6
PGR083G1089 Punica granatum HOM05D002646 ORTHO05D002782 3.6e-07 58.5 120 37.5
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 6.2e-07 57.8 119 33.6
CiPaw.16G059900 Carya illinoinensis HOM05D002646 ORTHO05D002782 1.1e-06 57.0 61 50.8
Ciclev10000434m.g Citrus clementina HOM05D002646 ORTHO05D002782 1.1e-06 57.0 52 59.6
SHI08146 Sapria himalayana HOM05D002646 ORTHO05D002782 1.1e-06 57.0 92 39.1
Eucgr.F01577 Eucalyptus grandis HOM05D002646 ORTHO05D002782 1.4e-06 56.6 48 60.4
Potri.005G228200 Populus trichocarpa HOM05D002646 ORTHO05D002782 1.4e-06 56.6 70 52.9
HanXRQChr03g0069631 Helianthus annuus HOM05D002646 ORTHO05D002782 3.1e-06 55.5 106 34.9


User provided reference genes

Program Settings