Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 7.9e-82 307.0 147 100.0
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 4.0e-78 294.7 145 97.2
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 8.7e-73 276.9 148 87.8
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 1.6e-71 272.7 147 89.1
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 2.4e-70 268.9 147 87.1
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 8.7e-65 250.4 175 73.1
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 6.9e-62 240.7 145 79.3
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 1.0e-60 236.9 146 74.7
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 3.8e-60 235.0 146 77.4
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 8.5e-60 233.8 147 72.1
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.9e-59 232.6 145 71.0
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 1.6e-58 229.6 166 66.3
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 3.6e-58 228.4 146 71.2
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 4.6e-58 228.0 146 71.9
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 4.6e-58 228.0 146 70.5
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 6.1e-58 227.6 146 72.6
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.8e-57 226.1 145 69.7
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 3.9e-57 224.9 146 71.9
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 3.9e-57 224.9 146 70.5
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 3.9e-57 224.9 147 72.8
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 6.7e-57 224.2 146 69.9
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 6.7e-57 224.2 147 71.4
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 1.1e-56 223.4 146 68.5
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 1.9e-56 222.6 146 67.1
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.9e-56 222.6 146 69.9
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 3.3e-56 221.9 146 68.5
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.3e-56 221.5 148 70.9
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 7.4e-56 220.7 146 67.1
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 9.7e-56 220.3 146 68.5
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 9.7e-56 220.3 146 68.5
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 1.3e-55 219.9 146 67.1
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 1.3e-55 219.9 146 67.1
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 1.3e-55 219.9 146 67.1
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 2.8e-55 218.8 146 67.1
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 2.8e-55 218.8 146 67.8
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 3.7e-55 218.4 146 69.2
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 4.8e-55 218.0 146 65.8
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 6.3e-55 217.6 145 66.2
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 6.3e-55 217.6 146 68.5
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 1.1e-54 216.9 147 68.7
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 1.8e-54 216.1 146 67.1
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.8e-54 216.1 145 66.9
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 2.4e-54 215.7 145 66.9
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.1e-54 214.9 144 67.4
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 6.9e-54 214.2 170 59.4
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 6.9e-54 214.2 148 66.2
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 1.2e-53 213.4 147 67.3
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.2e-53 213.4 145 67.6
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.0e-53 212.6 170 58.8
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 3.4e-53 211.8 136 72.1
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 4.5e-53 211.5 148 65.5
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 7.7e-53 210.7 146 67.8
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 1.3e-52 209.9 146 66.4
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 1.7e-52 209.5 149 65.8
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.7e-52 209.5 147 68.0
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 2.2e-52 209.1 145 64.1
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 2.2e-52 209.1 152 67.1
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 5.0e-52 208.0 169 61.5
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 8.5e-52 207.2 212 51.4
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 1.1e-51 206.8 146 66.4
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 1.9e-51 206.1 146 62.3
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 2.5e-51 205.7 145 64.1
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 2.5e-51 205.7 145 64.1
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 5.5e-51 204.5 146 63.7
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 5.5e-51 204.5 146 63.7
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 7.2e-51 204.1 163 62.0
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 9.4e-51 203.8 146 65.1
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 1.2e-50 203.4 146 63.7
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 1.2e-50 203.4 147 62.6
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 2.1e-50 202.6 145 62.8
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 2.1e-50 202.6 147 66.7
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 4.7e-50 201.4 151 62.9
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 1.0e-49 200.3 146 65.1
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 1.8e-49 199.5 184 54.3
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 3.9e-49 198.4 146 61.0
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 3.9e-49 198.4 146 61.6
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.5e-48 196.4 146 59.6
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 2.0e-48 196.1 146 60.3
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 2.0e-48 196.1 146 61.6
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 3.3e-48 195.3 146 58.9
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 3.3e-48 195.3 146 61.6
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 7.4e-48 194.1 147 60.5
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 9.7e-48 193.7 146 62.3
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 2.8e-47 192.2 125 69.6
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 4.8e-47 191.4 147 59.9
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 4.8e-47 191.4 147 59.9
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 1.1e-46 190.3 146 58.2
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.8e-46 189.5 147 59.2
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 1.2e-45 186.8 134 63.4
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 3.4e-45 185.3 145 60.0
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 7.7e-45 184.1 119 66.4
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 6.5e-44 181.0 124 69.4
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 1.4e-43 179.9 147 55.8
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 6.1e-42 174.5 109 74.3
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 6.7e-41 171.0 95 85.3
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 5.0e-36 154.8 102 66.7
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 2.6e-32 142.5 117 54.7
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 3.3e-32 142.1 146 52.7
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 1.0e-25 120.6 102 54.9
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 5.7e-24 114.8 82 67.1
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 2.8e-23 112.5 99 50.5
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 1.2e-21 107.1 145 33.8
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 9.5e-19 97.4 64 68.8
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 1.2e-18 97.1 131 42.7
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.7e-18 95.1 66 68.2
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 4.7e-18 95.1 151 33.1
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 8.0e-18 94.4 67 65.7
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 8.9e-17 90.9 78 56.4
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 3.7e-15 85.5 101 45.5
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.5e-13 78.6 45 73.3
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 1.0e-12 77.4 144 29.2
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 1.5e-11 73.6 64 56.2
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 4.0e-09 65.5 66 50.0
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 2.9e-07 59.3 38 63.2


User provided reference genes

Program Settings