Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.6e-283 978.8 506 100.0
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 4.7e-227 791.2 505 83.4
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 2.8e-211 738.8 492 80.1
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 2.2e-208 729.2 492 78.5
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 1.0e-205 720.3 500 78.4
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 1.0e-205 720.3 493 79.1
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 2.4e-199 699.1 500 76.0
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 5.1e-173 611.7 544 62.7
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 5.3e-170 601.7 501 63.7
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 6.9e-170 601.3 501 63.7
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 2.6e-169 599.4 504 61.9
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.0e-168 597.4 489 65.0
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 3.8e-168 595.5 496 63.9
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 3.8e-168 595.5 499 62.3
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 7.9e-166 587.8 495 62.6
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 3.3e-164 582.4 498 63.1
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 4.4e-164 582.0 484 62.4
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 4.4e-164 582.0 472 65.0
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 1.7e-163 580.1 486 62.3
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 1.1e-162 577.4 505 61.8
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 2.4e-162 576.2 488 62.9
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 3.1e-162 575.9 488 63.1
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 1.5e-161 573.5 492 62.2
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 2.6e-161 572.8 488 62.5
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 3.5e-161 572.4 482 62.9
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.5e-161 572.0 490 62.4
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 2.2e-160 569.7 492 61.6
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 2.9e-160 569.3 489 62.2
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 5.0e-160 568.5 483 61.3
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 8.5e-160 567.8 507 59.2
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.1e-159 567.4 499 61.3
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.9e-159 566.6 493 62.7
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.5e-159 566.2 494 62.3
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 3.2e-159 565.8 465 62.8
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 3.2e-159 565.8 493 61.3
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 9.4e-159 564.3 499 59.7
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.2e-158 563.9 463 63.5
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 2.7e-158 562.8 507 58.8
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.6e-158 562.4 481 62.2
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 3.0e-157 559.3 459 63.6
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 4.0e-157 558.9 483 62.9
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 5.2e-157 558.5 483 60.2
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 6.7e-157 558.1 495 60.0
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 3.3e-156 555.8 463 62.4
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 3.3e-156 555.8 496 60.9
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.4e-156 555.4 499 61.3
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 5.7e-156 555.1 476 61.1
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 1.3e-155 553.9 466 61.8
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.3e-155 553.9 499 60.9
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.8e-155 552.7 476 60.7
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 3.7e-155 552.4 487 59.8
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 4.8e-155 552.0 454 63.0
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 4.8e-155 552.0 490 61.4
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 4.8e-155 552.0 481 61.1
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 4.1e-154 548.9 479 60.1
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 5.3e-154 548.5 490 58.4
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 7.0e-154 548.1 440 65.2
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 7.0e-154 548.1 499 58.9
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 4.5e-153 545.4 489 58.9
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 5.9e-153 545.0 498 58.2
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 7.7e-153 544.7 499 58.5
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 1.0e-152 544.3 486 60.1
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.7e-152 543.5 489 59.5
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 1.7e-152 543.5 495 58.8
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 2.2e-152 543.1 511 58.7
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 2.9e-152 542.7 495 60.4
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 5.5e-151 538.5 486 59.3
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 7.2e-151 538.1 462 61.3
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 2.3e-149 533.1 468 61.3
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 3.0e-149 532.7 496 58.7
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 1.5e-148 530.4 470 59.6
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.2e-147 526.6 468 61.1
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 3.7e-147 525.8 491 57.4
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 3.1e-146 522.7 485 59.0
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 4.5e-145 518.8 497 57.3
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 1.0e-144 517.7 494 57.3
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.9e-144 516.2 453 59.4
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 6.5e-144 515.0 465 58.9
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 2.5e-143 513.1 505 54.5
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 3.2e-143 512.7 487 56.5
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 2.1e-142 510.0 514 55.1
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 8.0e-142 508.1 450 59.3
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 4.4e-140 502.3 464 57.8
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 2.8e-139 499.6 409 63.6
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.1e-138 496.1 427 62.8
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 1.2e-137 494.2 495 54.9
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 2.9e-136 489.6 408 63.2
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 4.3e-135 485.7 442 57.7
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 3.0e-133 479.6 503 54.3
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 3.0e-133 479.6 503 54.3
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.6e-129 467.2 463 53.6
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.9e-129 465.3 415 61.0
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 2.3e-128 463.4 456 53.5
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 4.0e-125 452.6 342 67.3
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 6.2e-118 428.7 456 51.1
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 1.3e-115 421.0 339 63.4
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 3.2e-114 416.4 486 52.1
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 5.4e-114 415.6 453 50.8
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.0e-112 411.4 475 50.1
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 2.9e-107 393.3 370 58.6
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.4e-106 389.0 306 62.7
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 1.1e-98 364.8 361 57.9
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 5.1e-96 355.9 454 46.5
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.6e-95 352.4 255 69.8
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.7e-89 333.6 346 54.3
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 5.1e-88 329.3 436 45.0
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.1e-78 297.4 272 62.1
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 4.0e-77 293.1 274 62.0
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 3.0e-72 276.9 234 60.3
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 6.9e-69 265.8 429 41.0
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 3.9e-56 223.4 455 34.1
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.7e-44 182.6 205 51.7
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.6e-41 173.7 165 57.0
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.8e-37 161.4 156 56.4
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.3e-37 159.8 189 50.3
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.3e-35 155.2 189 49.2
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 1.9e-34 151.4 102 72.5
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.5e-34 151.0 189 48.1
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.2e-34 149.4 102 77.5
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.1e-33 147.9 102 70.6
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 6.5e-27 126.3 150 46.7
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 8.0e-25 119.4 68 79.4
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.7e-23 113.2 100 54.0
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 1.3e-22 112.1 68 76.5
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 3.7e-22 110.5 84 61.9
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 3.8e-19 100.5 56 80.4
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 9.5e-18 95.9 114 51.8
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 6.8e-16 89.7 58 74.1
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 3.4e-15 87.4 177 38.4
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 7.5e-15 86.3 78 56.4
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 1.8e-13 81.6 179 37.4
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 1.0e-11 75.9 42 76.2
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 9.5e-10 69.3 41 80.5


User provided reference genes

Program Settings