Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000617g0180 Nicotiana tabacum HOM05D000224 ORTHO05D284061 9.7e-32 139.4 66 100.0
Nitab4.5_0000806g0070 Nicotiana tabacum HOM05D000224 ORTHO05D000337 8.9e-17 89.7 50 76.0
Solyc03g070380.3 Solanum lycopersicum HOM05D000224 ORTHO05D000337 7.5e-16 86.7 50 74.0
Sopen03g019120 Solanum pennellii HOM05D000224 ORTHO05D000337 7.5e-16 86.7 50 74.0
Nitab4.5_0003697g0020 Nicotiana tabacum HOM05D000224 ORTHO05D000337 2.2e-15 85.1 45 80.0
Peaxi162Scf00049g00019 Petunia axillaris HOM05D000224 ORTHO05D000337 2.2e-15 85.1 45 77.8
CAN.G533.13 Capsicum annuum HOM05D000224 ORTHO05D000337 2.8e-15 84.7 48 77.1
Peaxi162Scf00019g00237 Petunia axillaris HOM05D000224 ORTHO05D000337 6.3e-15 83.6 47 76.6
PGSC0003DMG400007654 Solanum tuberosum HOM05D000224 ORTHO05D000337 4.1e-14 80.9 50 70.0
PGSC0003DMG400000757 Solanum tuberosum HOM05D000224 ORTHO05D000337 1.2e-13 79.3 46 73.9
Sopen02g015380 Solanum pennellii HOM05D000224 ORTHO05D000337 2.0e-13 78.6 55 69.1
CAN.G533.10 Capsicum annuum HOM05D000224 ORTHO05D000337 3.5e-13 77.8 44 77.3
Solyc02g065240.3 Solanum lycopersicum HOM05D000224 ORTHO05D000337 4.5e-13 77.4 58 63.8
Sopen02g015420 Solanum pennellii HOM05D000224 ORTHO05D000337 5.9e-13 77.0 47 72.3
Sopen02g015390 Solanum pennellii HOM05D000224 ORTHO05D000337 1.0e-12 76.3 46 73.9
Sopen02g015410 Solanum pennellii HOM05D000224 ORTHO05D000337 1.0e-12 76.3 47 68.1
Solyc02g065280.3 Solanum lycopersicum HOM05D000224 ORTHO05D000337 2.3e-12 75.1 47 72.3
Hma1.2p1_0546F.1_g176220 Hydrangea macrophylla HOM05D000224 ORTHO05D000337 3.9e-12 74.3 50 64.0
Sopen02g015400 Solanum pennellii HOM05D000224 ORTHO05D000337 8.6e-12 73.2 47 70.2
PGSC0003DMG400000756 Solanum tuberosum HOM05D000224 ORTHO05D000337 1.1e-11 72.8 47 70.2
Solyc02g065260.4 Solanum lycopersicum HOM05D000224 ORTHO05D000337 1.9e-11 72.0 44 68.2
MSTRG.2912 Avicennia marina HOM05D000224 ORTHO05D000337 7.3e-11 70.1 50 60.0
Dinv42710 Davidia involucrata HOM05D000224 ORTHO05D000337 9.5e-11 69.7 52 55.8
PGSC0003DMG400000755 Solanum tuberosum HOM05D000224 ORTHO05D000337 9.5e-11 69.7 47 61.7
SGA_v2.0_scaffold204G41610 Striga asiatica HOM05D000224 ORTHO05D000337 9.5e-11 69.7 50 58.0
Cfa004214 Carpinus fangiana HOM05D000224 ORTHO05D000337 2.8e-10 68.2 43 69.8
Solyc02g065250.2 Solanum lycopersicum HOM05D000224 ORTHO05D000337 3.6e-10 67.8 54 64.8
QL06p043490 Quercus lobata HOM05D000224 ORTHO05D000337 4.7e-10 67.4 46 63.0
Dinv43391 Davidia involucrata HOM05D000224 ORTHO05D000337 1.0e-09 66.2 50 54.0
CSS0034564 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D000337 1.4e-09 65.9 49 61.2
Dinv26747 Davidia involucrata HOM05D000224 ORTHO05D000337 2.3e-09 65.1 48 56.2
TAR625G0936 Trochodendron aralioides HOM05D000224 ORTHO05D000337 3.1e-09 64.7 51 58.8
Dinv26743 Davidia involucrata HOM05D000224 ORTHO05D000337 4.0e-09 64.3 52 55.8
Thecc.01G049300 Theobroma cacao HOM05D000224 ORTHO05D000337 4.0e-09 64.3 46 58.7
Duzib147G0293 Durio zibethinus HOM05D000224 ORTHO05D000337 5.2e-09 63.9 46 58.7
CSS0040708 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D000337 6.8e-09 63.5 49 61.2
CiPaw.01G026000 Carya illinoinensis HOM05D000224 ORTHO05D000337 6.8e-09 63.5 45 62.2
TAR381G0678 Trochodendron aralioides HOM05D000224 ORTHO05D000337 6.8e-09 63.5 43 62.8
CsaV3_6G042950 Cucumis sativus L. HOM05D000224 ORTHO05D000337 1.2e-08 62.8 55 52.7
MD15G1275800 Malus domestica HOM05D000224 ORTHO05D000337 1.2e-08 62.8 46 58.7
Potri.007G037700 Populus trichocarpa HOM05D000224 ORTHO05D000337 1.5e-08 62.4 47 57.4
COL.COLO4_11338 Corchorus olitorius HOM05D000224 ORTHO05D000337 2.0e-08 62.0 46 56.5
MELO3C007531.2 Cucumis melo HOM05D000224 ORTHO05D000337 2.0e-08 62.0 55 50.9
Dinv26745 Davidia involucrata HOM05D000224 ORTHO05D000337 2.0e-08 62.0 44 61.4
Glyma.02G063300 Glycine max HOM05D000224 ORTHO05D000337 2.6e-08 61.6 47 57.4
Cc07_g05600 Coffea canephora HOM05D000224 ORTHO05D000337 3.4e-08 61.2 48 62.5
Glyma.02G063000 Glycine max HOM05D000224 ORTHO05D000337 5.8e-08 60.5 47 55.3
TWI73G0941 Tripterygium wilfordii HOM05D000224 ORTHO05D000337 5.8e-08 60.5 46 56.5
CSS0045993 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D000337 7.5e-08 60.1 49 57.1
ECA246G0843 Erigeron canadensis HOM05D000224 ORTHO05D000337 7.5e-08 60.1 47 53.2
Prupe.7G142100 Prunus persica HOM05D000224 ORTHO05D000337 7.5e-08 60.1 46 54.3
Potri.007G037300 Populus trichocarpa HOM05D000224 ORTHO05D000337 9.8e-08 59.7 47 57.4
Gohir.A11G189100 Gossypium hirsutum HOM05D000224 ORTHO05D000337 1.3e-07 59.3 46 54.3
Lsat_1_v5_gn_3_92441 Lactuca sativa HOM05D000224 ORTHO05D000337 1.3e-07 59.3 47 55.3
GSVIVG01005065001 Vitis vinifera HOM05D000224 ORTHO05D000337 1.3e-07 59.3 43 58.1
Prupe.7G142200 Prunus persica HOM05D000224 ORTHO05D000337 1.7e-07 58.9 43 62.8
ClCG01G016590 Citrullus lanatus HOM05D000224 ORTHO05D000337 2.2e-07 58.5 47 53.2
CsaV3_6G042920 Cucumis sativus L. HOM05D000224 ORTHO05D000337 2.2e-07 58.5 58 46.6
Migut.H00480 Erythranthe guttata HOM05D000224 ORTHO05D000337 2.9e-07 58.2 47 57.4
Dinv39904 Davidia involucrata HOM05D000224 ORTHO05D000337 4.9e-07 57.4 47 53.2
Manes.12G096000 Manihot esculenta HOM05D000224 ORTHO05D000337 4.9e-07 57.4 43 55.8
Sabra07G0034000 Salix brachista HOM05D000224 ORTHO05D000337 4.9e-07 57.4 44 59.1
Eucgr.I01006 Eucalyptus grandis HOM05D000224 ORTHO05D000337 6.4e-07 57.0 46 52.2
MD02G1161400 Malus domestica HOM05D000224 ORTHO05D000337 6.4e-07 57.0 43 55.8
Thecc.01G048700 Theobroma cacao HOM05D000224 ORTHO05D000337 6.4e-07 57.0 49 49.0
MD02G1161600 Malus domestica HOM05D000224 ORTHO05D000337 8.3e-07 56.6 40 60.0
Eucgr.I01014 Eucalyptus grandis HOM05D000224 ORTHO05D000337 1.1e-06 56.2 47 48.9
Gohir.D11G195700 Gossypium hirsutum HOM05D000224 ORTHO05D000337 1.1e-06 56.2 46 52.2
Gorai.007G209500 Gossypium raimondii HOM05D000224 ORTHO05D000337 1.1e-06 56.2 46 52.2
MD15G1275500 Malus domestica HOM05D000224 ORTHO05D000337 1.9e-06 55.5 47 51.1
Eucgr.I01013 Eucalyptus grandis HOM05D000224 ORTHO05D000337 2.4e-06 55.1 47 48.9
Actinidia12076 Actinidia chinensis HOM05D000224 ORTHO05D000337 3.2e-06 54.7 55 49.1
Eucgr.I01002 Eucalyptus grandis HOM05D000224 ORTHO05D000337 4.1e-06 54.3 46 52.2
Eucgr.I01007 Eucalyptus grandis HOM05D000224 ORTHO05D000337 4.1e-06 54.3 46 52.2
HanXRQChr15g0473771 Helianthus annuus HOM05D000224 ORTHO05D000337 4.1e-06 54.3 46 50.0
Oeu061619.1 Olea europaea HOM05D000224 ORTHO05D000337 4.1e-06 54.3 58 46.6
Oeu061625.1 Olea europaea HOM05D000224 ORTHO05D000337 4.1e-06 54.3 58 46.6
CANSAT01G2647 Cannabis sativa HOM05D000224 ORTHO05D000337 5.4e-06 53.9 43 53.5
Eucgr.I01011 Eucalyptus grandis HOM05D000224 ORTHO05D000337 5.4e-06 53.9 39 59.0
Hma1.2p1_0687F.1_g203500 Hydrangea macrophylla HOM05D000224 ORTHO05D000337 5.4e-06 53.9 47 51.1
vmacro05298 Vaccinium macrocarpon HOM05D000224 ORTHO05D000337 7.0e-06 53.5 44 50.0
Eucgr.I00998 Eucalyptus grandis HOM05D000224 ORTHO05D000337 9.2e-06 53.1 46 52.2
FvH4_1g14820 Fragaria vesca HOM05D000224 ORTHO05D000337 9.2e-06 53.1 37 64.9
FAN28G0454 Fragaria x ananassa HOM05D000224 ORTHO05D000337 9.2e-06 53.1 37 64.9
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.2e-06 53.1 37 64.9
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.2e-06 53.1 37 64.9
Oeu061618.1 Olea europaea HOM05D000224 ORTHO05D000337 9.2e-06 53.1 46 47.8
Rhsim10G0095900 Rhododendron simsii HOM05D000224 ORTHO05D000337 9.2e-06 53.1 44 52.3


User provided reference genes

Program Settings