Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000615g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.1e-33 146.4 94 100.0
Nitab4.5_0000615g0030 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.5e-20 102.1 97 60.8
Nitab4.5_0005222g0010 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.2e-20 101.3 97 60.8
CAN.G439.25 Capsicum annuum HOM05D001375 ORTHO05D001222 2.9e-13 78.6 138 38.4
Peaxi162Scf00217g00621 Petunia axillaris HOM05D001375 ORTHO05D001222 1.4e-12 76.3 138 38.4
Actinidia00601 Actinidia chinensis HOM05D001375 ORTHO05D001222 9.4e-12 73.6 76 52.6
Eucgr.G01763 Eucalyptus grandis HOM05D001375 ORTHO05D001222 8.8e-10 67.0 104 36.5
CAN.G439.23 Capsicum annuum HOM05D001375 ORTHO05D001222 1.1e-09 66.6 138 33.3
Cc02_g29340 Coffea canephora HOM05D001375 ORTHO05D001222 1.5e-09 66.2 104 38.5
Dinv04961 Davidia involucrata HOM05D001375 ORTHO05D001222 4.3e-09 64.7 140 32.9
Cc00_g05670 Coffea canephora HOM05D001375 ORTHO05D001222 5.7e-09 64.3 112 35.7
Ciclev10030294m.g Citrus clementina HOM05D001375 ORTHO05D001222 7.4e-09 63.9 104 36.5
Peaxi162Scf00362g00957 Petunia axillaris HOM05D001375 ORTHO05D001222 7.4e-09 63.9 104 36.5
Solyc11g071550.2 Solanum lycopersicum HOM05D001375 ORTHO05D001222 7.4e-09 63.9 139 33.1
CAN.G439.22 Capsicum annuum HOM05D001375 ORTHO05D001222 1.3e-08 63.2 138 32.6
DCAR_003706 Daucus carota HOM05D001375 ORTHO05D001222 1.3e-08 63.2 139 31.7
PGSC0003DMG400018706 Solanum tuberosum HOM05D001375 ORTHO05D001222 1.3e-08 63.2 139 33.1
CAN.G439.21 Capsicum annuum HOM05D001375 ORTHO05D001222 2.2e-08 62.4 138 32.6
Sopen11g029240 Solanum pennellii HOM05D001375 ORTHO05D001222 6.3e-08 60.8 139 32.4
CSS0013885 Camellia sinensis var. sinensis HOM05D001375 ORTHO05D001222 1.8e-07 59.3 139 30.9
QL11p048011 Quercus lobata HOM05D001375 ORTHO05D001222 1.8e-07 59.3 139 32.4
COL.COLO4_17269 Corchorus olitorius HOM05D001375 ORTHO05D001222 2.4e-07 58.9 138 31.2
DCAR_003244 Daucus carota HOM05D001375 ORTHO05D001222 2.4e-07 58.9 118 33.1
Gohir.A01G164400 Gossypium hirsutum HOM05D001375 ORTHO05D001222 2.4e-07 58.9 98 37.8
Lsat_1_v5_gn_8_126020 Lactuca sativa HOM05D001375 ORTHO05D001222 2.4e-07 58.9 139 30.9
TAR381G1166 Trochodendron aralioides HOM05D001375 ORTHO05D001222 3.1e-07 58.5 139 30.2
Ah.04g162350 Amaranthus hybridus HOM05D001375 ORTHO05D001222 4.1e-07 58.2 136 30.1
PGSC0003DMG400002019 Solanum tuberosum HOM05D001375 ORTHO05D001222 4.1e-07 58.2 40 65.0
Gohir.D01G156400 Gossypium hirsutum HOM05D001375 ORTHO05D001222 5.3e-07 57.8 138 30.4
Gorai.002G194000 Gossypium raimondii HOM05D001375 ORTHO05D001222 5.3e-07 57.8 138 30.4
Manes.04G077700 Manihot esculenta HOM05D001375 ORTHO05D001222 5.3e-07 57.8 139 30.9
QL11p048023 Quercus lobata HOM05D001375 ORTHO05D001222 5.3e-07 57.8 139 31.7
QL11p047952 Quercus lobata HOM05D001375 ORTHO05D001222 6.9e-07 57.4 40 62.5
QL11p048119 Quercus lobata HOM05D001375 ORTHO05D001222 6.9e-07 57.4 139 30.2
Ca_18012_v3 Cicer arietinum L. HOM05D001375 ORTHO05D001222 9.1e-07 57.0 139 31.7
FAN15G3245 Fragaria x ananassa HOM05D001375 ORTHO05D001222 9.1e-07 57.0 140 30.0
Prupe.8G161800 Prunus persica HOM05D001375 ORTHO05D001222 9.1e-07 57.0 140 28.6
QL11p047962 Quercus lobata HOM05D001375 ORTHO05D001222 9.1e-07 57.0 40 62.5
Sed0022074 Sechium edule HOM05D001375 ORTHO05D001222 9.1e-07 57.0 139 29.5
Ciclev10028203m.g Citrus clementina HOM05D001375 ORTHO05D001222 1.2e-06 56.6 40 62.5
DCAR_003708 Daucus carota HOM05D001375 ORTHO05D001222 1.2e-06 56.6 40 65.0
Dinv04962 Davidia involucrata HOM05D001375 ORTHO05D001222 1.2e-06 56.6 139 30.9
Duzib052G0515 Durio zibethinus HOM05D001375 ORTHO05D001222 1.2e-06 56.6 138 30.4
HanXRQChr15g0472021 Helianthus annuus HOM05D001375 ORTHO05D001222 1.2e-06 56.6 138 29.7
RcHm_v2.0_Chr6g0244741 Rosa chinensis HOM05D001375 ORTHO05D001222 1.2e-06 56.6 140 29.3
RcHm_v2.0_Chr6g0244751 Rosa chinensis HOM05D001375 ORTHO05D001222 1.2e-06 56.6 140 29.3
Cpa.g.sc37.181 Carica papaya HOM05D001375 ORTHO05D001222 1.5e-06 56.2 39 66.7
QL11p048533 Quercus lobata HOM05D001375 ORTHO05D001222 1.5e-06 56.2 40 67.5
vmacro19250 Vaccinium macrocarpon HOM05D001375 ORTHO05D001222 1.5e-06 56.2 40 67.5
Ciclev10028286m.g Citrus clementina HOM05D001375 ORTHO05D001222 2.0e-06 55.8 40 62.5
FAN27G1777 Fragaria x ananassa HOM05D001375 ORTHO05D001222 2.0e-06 55.8 40 62.5
Medtr8g080840 Medicago truncatula HOM05D001375 ORTHO05D001222 2.0e-06 55.8 139 29.5
Psat7g075560 Pisum sativum HOM05D001375 ORTHO05D001222 2.0e-06 55.8 139 30.2
TAR381G0102 Trochodendron aralioides HOM05D001375 ORTHO05D001222 2.0e-06 55.8 140 30.7
Thecc.02G065900 Theobroma cacao HOM05D001375 ORTHO05D001222 2.6e-06 55.5 40 62.5
ATR0810G091 Amborella trichopoda HOM05D001375 ORTHO05D001222 3.4e-06 55.1 109 35.8
Cfa005202 Carpinus fangiana HOM05D001375 ORTHO05D001222 3.4e-06 55.1 40 65.0
Haze_13060 Corylus avellana HOM05D001375 ORTHO05D001222 3.4e-06 55.1 40 62.5
Potri.004G171300 Populus trichocarpa HOM05D001375 ORTHO05D001222 3.4e-06 55.1 40 62.5
QL11p047888 Quercus lobata HOM05D001375 ORTHO05D001222 3.4e-06 55.1 40 57.5
Thecc.05G242200 Theobroma cacao HOM05D001375 ORTHO05D001222 3.4e-06 55.1 138 30.4
TPR.G26569 Trifolium pratense HOM05D001375 ORTHO05D001222 3.4e-06 55.1 139 30.2
Atru.chr5.3247 Acer truncatum HOM05D001375 ORTHO05D001222 4.5e-06 54.7 43 62.8
Cfa005206 Carpinus fangiana HOM05D001375 ORTHO05D001222 4.5e-06 54.7 139 30.2
HanXRQChr15g0472011 Helianthus annuus HOM05D001375 ORTHO05D001222 4.5e-06 54.7 138 29.0
MD10G1120200 Malus domestica HOM05D001375 ORTHO05D001222 4.5e-06 54.7 40 60.0
Sopen01g053280 Solanum pennellii HOM05D001375 ORTHO05D001222 4.5e-06 54.7 40 60.0
Cfa005197 Carpinus fangiana HOM05D001375 ORTHO05D001222 5.9e-06 54.3 40 62.5
Cfa005204 Carpinus fangiana HOM05D001375 ORTHO05D001222 5.9e-06 54.3 139 29.5
Cfa005205 Carpinus fangiana HOM05D001375 ORTHO05D001222 5.9e-06 54.3 139 29.5
Haze_02187 Corylus avellana HOM05D001375 ORTHO05D001222 5.9e-06 54.3 40 57.5
FAN20G2903 Fragaria x ananassa HOM05D001375 ORTHO05D001222 5.9e-06 54.3 138 30.4
PSO135G0202 Papaver somniferum HOM05D001375 ORTHO05D001222 5.9e-06 54.3 63 49.2
Prupe.8G161600 Prunus persica HOM05D001375 ORTHO05D001222 5.9e-06 54.3 40 57.5
Prupe.8G161900 Prunus persica HOM05D001375 ORTHO05D001222 5.9e-06 54.3 139 28.8
QL02p039765 Quercus lobata HOM05D001375 ORTHO05D001222 5.9e-06 54.3 40 65.0
ClCG02G004250 Citrullus lanatus HOM05D001375 ORTHO05D001222 7.7e-06 53.9 40 60.0
Cc00_g05620 Coffea canephora HOM05D001375 ORTHO05D001222 7.7e-06 53.9 139 28.1
FvH4_2g01722 Fragaria vesca HOM05D001375 ORTHO05D001222 7.7e-06 53.9 140 30.7
FAN24G2437 Fragaria x ananassa HOM05D001375 ORTHO05D001222 7.7e-06 53.9 140 30.7
Nn7g36788 Nelumbo nucifera HOM05D001375 ORTHO05D001222 7.7e-06 53.9 40 60.0
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 7.7e-06 53.9 40 57.5
QL11p048093 Quercus lobata HOM05D001375 ORTHO05D001222 7.7e-06 53.9 139 30.2
TWI75G1622 Tripterygium wilfordii HOM05D001375 ORTHO05D001222 7.7e-06 53.9 40 55.0


User provided reference genes

Program Settings