Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 8.1e-165 583.9 358 100.0
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 6.7e-159 564.3 358 94.4
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 3.6e-112 409.1 341 72.4
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 8.2e-109 397.9 340 67.4
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 4.5e-107 392.1 341 66.9
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 5.7e-94 348.6 340 67.1
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 7.8e-91 338.2 348 61.8
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 2.7e-75 286.6 354 53.1
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 1.5e-73 280.8 349 54.7
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 2.2e-69 266.9 348 50.6
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 7.1e-68 261.9 350 53.7
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 7.1e-68 261.9 350 53.7
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.8e-64 250.0 347 47.3
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 2.8e-64 250.0 342 47.4
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 1.8e-63 247.3 347 47.0
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 1.8e-63 247.3 339 48.1
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 3.1e-63 246.5 347 47.0
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.6e-62 243.4 341 49.0
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 9.9e-62 241.5 341 45.7
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 1.3e-61 241.1 342 46.2
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 1.7e-61 240.7 345 44.6
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 1.1e-60 238.0 346 45.1
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 1.1e-60 238.0 338 50.3
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 1.1e-60 238.0 346 45.1
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 3.2e-60 236.5 347 45.8
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 3.2e-60 236.5 347 45.8
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 5.4e-60 235.7 345 46.4
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 5.4e-60 235.7 344 45.1
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 1.2e-59 234.6 344 44.5
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 1.2e-59 234.6 344 44.5
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 2.7e-59 233.4 366 43.4
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 4.6e-59 232.6 350 46.0
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 6.0e-59 232.3 347 45.5
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 7.8e-59 231.9 345 44.3
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 7.8e-59 231.9 341 47.8
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 1.7e-58 230.7 345 48.4
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 1.7e-58 230.7 360 44.7
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.3e-58 230.3 347 45.0
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 2.3e-58 230.3 345 45.5
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 3.0e-58 229.9 345 44.3
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 3.0e-58 229.9 345 44.3
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 3.9e-58 229.6 339 45.4
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 3.9e-58 229.6 349 45.6
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 5.1e-58 229.2 344 44.5
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 8.7e-58 228.4 345 44.1
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 8.7e-58 228.4 339 46.3
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 8.7e-58 228.4 364 44.2
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 1.5e-57 227.6 352 44.0
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 3.3e-57 226.5 350 44.3
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 4.3e-57 226.1 345 44.1
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 4.3e-57 226.1 345 45.5
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 5.6e-57 225.7 340 43.8
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 9.6e-57 224.9 349 43.6
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 1.2e-56 224.6 345 44.3
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 1.2e-56 224.6 343 45.5
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 1.6e-56 224.2 350 43.4
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 3.6e-56 223.0 348 46.6
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 8.1e-56 221.9 339 47.5
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 1.8e-55 220.7 345 44.1
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 2.4e-55 220.3 354 43.5
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 1.2e-54 218.0 347 43.5
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 1.2e-54 218.0 340 47.6
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 1.5e-54 217.6 345 44.6
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 1.5e-54 217.6 350 42.3
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 2.0e-54 217.2 340 48.5
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 5.8e-54 215.7 348 43.1
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 1.7e-53 214.2 345 41.7
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 3.8e-53 213.0 343 43.7
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 4.9e-53 212.6 341 41.3
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 6.4e-53 212.2 344 48.0
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 1.1e-52 211.5 342 42.4
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 2.4e-52 210.3 343 43.1
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 2.4e-52 210.3 348 42.0
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 5.4e-52 209.1 342 41.8
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 5.4e-52 209.1 342 41.8
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 5.4e-52 209.1 342 41.8
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 7.1e-52 208.8 339 44.0
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 7.1e-52 208.8 339 44.0
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 7.1e-52 208.8 338 42.9
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 1.6e-51 207.6 340 43.8
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 2.1e-51 207.2 342 41.8
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 2.1e-51 207.2 337 44.5
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 2.7e-51 206.8 342 41.5
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 3.5e-51 206.5 348 45.4
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 3.5e-51 206.5 348 45.4
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 3.5e-51 206.5 345 40.6
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 7.8e-51 205.3 341 41.1
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 1.0e-50 204.9 340 45.6
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 2.3e-50 203.8 343 42.9
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 2.3e-50 203.8 347 45.2
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 3.9e-50 203.0 344 41.3
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 3.9e-50 203.0 345 44.3
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 5.1e-50 202.6 340 40.6
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.9e-49 200.7 367 39.2
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 3.3e-49 199.9 341 40.8
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 3.6e-48 196.4 339 41.0
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 3.6e-48 196.4 344 41.0
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 2.4e-47 193.7 345 39.7
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 5.3e-47 192.6 335 41.2
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 9.0e-47 191.8 351 44.2
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 4.5e-46 189.5 353 39.1
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 5.8e-46 189.1 341 40.5
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 9.9e-46 188.3 358 40.2
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 8.4e-45 185.3 350 39.4
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 1.9e-44 184.1 354 39.8
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 9.3e-44 181.8 346 39.9
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 1.0e-42 178.3 318 40.9
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 3.7e-40 169.9 373 37.5
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 2.6e-38 163.7 339 39.2
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 7.6e-38 162.2 346 36.4
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 9.9e-38 161.8 345 38.6
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 1.9e-36 157.5 372 33.3
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 4.2e-36 156.4 357 35.3
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 7.1e-36 155.6 327 40.1
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 2.1e-35 154.1 280 41.8
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 1.0e-34 151.8 255 49.4
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 1.3e-34 151.4 309 37.9
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 2.8e-32 143.7 350 37.4
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 2.4e-31 140.6 301 40.2
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 2.6e-30 137.1 258 46.5
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 1.3e-29 134.8 350 36.0
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 1.1e-28 131.7 367 38.4
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 1.6e-27 127.9 351 34.5
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 2.7e-27 127.1 122 59.0
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 2.3e-26 124.0 303 34.0
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 1.5e-25 121.3 224 40.2
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.6e-24 117.9 342 34.2
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 5.3e-23 112.8 324 29.9
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 6.9e-23 112.5 321 34.6
HanXRQChr11g0320651 Helianthus annuus HOM05D004638 ORTHO05D005443 9.0e-23 112.1 149 45.0
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 2.0e-22 110.9 99 60.6
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 2.6e-22 110.5 320 31.2
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 2.2e-21 107.5 147 43.5
unitig_22.g5966 Utricularia gibba HOM05D004638 ORTHO05D005443 1.6e-19 101.3 156 43.6
Nitab4.5_0000047g0240 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.1e-15 88.6 71 70.4
Nitab4.5_0000047g0220 Nicotiana tabacum HOM05D004638 ORTHO05D005443 5.3e-15 86.3 204 40.7
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 5.9e-14 82.8 315 30.2
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.3e-13 81.6 99 44.4
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 2.1e-11 74.3 125 37.6
AUR62039395 Chenopodium quinoa HOM05D004638 ORTHO05D005443 7.9e-11 72.4 62 59.7
CBR_g30748 Chara braunii HOM05D003542 ORTHO05D004799 1.0e-10 72.0 426 27.7
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 3.0e-10 70.5 135 40.0
Nitab4.5_0000047g0230 Nicotiana tabacum HOM05D004638 ORTHO05D005443 8.8e-10 68.9 94 52.1
Nitab4.5_0000047g0210 Nicotiana tabacum HOM05D004638 ORTHO05D005443 4.4e-09 66.6 147 44.9
Actinidia16422 Actinidia chinensis HOM05D004638 ORTHO05D005443 5.7e-09 66.2 98 44.9
MCO04G484 Micromonas commoda HOM05D004638 ORTHO05D005443 9.7e-09 65.5 354 27.4
Sabra08G0132300 Salix brachista HOM05D004638 ORTHO05D005443 5.9e-06 56.2 67 47.8


User provided reference genes

Program Settings