Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000612g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.1e-14 81.3 66 100.0
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.3e-12 75.1 71 64.8
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 8.0e-10 66.6 64 81.2
PGSC0003DMG400018773 Solanum tuberosum HOM05D002873 ORTHO05D002978 5.2e-09 63.9 64 89.1
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 8.9e-09 63.2 65 86.2
Sopen03g009840 Solanum pennellii HOM05D002873 ORTHO05D002978 1.5e-08 62.4 64 84.4
Solyc03g046320.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.0e-08 62.0 64 84.4
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.6e-08 61.6 66 50.0
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.6e-08 61.6 65 73.8
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 69.2
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 53.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 53.8
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 53.8
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 9.8e-08 59.7 65 53.8
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.7e-07 58.9 64 53.1
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.7e-07 58.9 65 52.3
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 2.2e-07 58.5 64 53.1
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 3.7e-07 57.8 65 49.2
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 4.9e-07 57.4 63 63.5
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 4.9e-07 57.4 65 50.8
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 6.4e-07 57.0 60 68.3
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 6.4e-07 57.0 64 57.8
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 6.4e-07 57.0 65 49.2
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 8.3e-07 56.6 64 75.0
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 8.3e-07 56.6 65 76.9
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.1e-06 56.2 64 68.8
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.1e-06 56.2 65 61.5
Ca_20747_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.4e-06 55.8 64 79.7
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 1.4e-06 55.8 62 71.0
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.9e-06 55.5 64 64.1
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 2.4e-06 55.1 65 61.5
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.4e-06 55.1 65 49.2
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 70.8
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 3.2e-06 54.7 64 62.5
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 64.6
Lsat_1_v5_gn_2_86260 Lactuca sativa HOM05D002873 ORTHO05D002978 3.2e-06 54.7 64 62.5
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 69.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 3.2e-06 54.7 65 61.5
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 3.2e-06 54.7 64 71.9
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 4.1e-06 54.3 66 69.7
Duzib133G0796 Durio zibethinus HOM05D020367 ORTHO05D002978 4.1e-06 54.3 64 71.9
Duzib133G0848 Durio zibethinus HOM05D020367 ORTHO05D002978 4.1e-06 54.3 64 71.9
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 5.4e-06 53.9 65 46.2
Lalb_Chr06g0174781 Lupinus albus HOM05D002873 ORTHO05D002978 5.4e-06 53.9 66 74.2
Phvul.008G022300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 7.0e-06 53.5 61 80.3
Psat1g063520 Pisum sativum HOM05D028482 ORTHO05D030489 7.0e-06 53.5 62 79.0
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.0e-06 53.5 65 66.2
Psat1g063240 Pisum sativum HOM05D028482 ORTHO05D030489 9.2e-06 53.1 62 77.4


User provided reference genes

Program Settings