Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.9e-90 334.0 170 100.0
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 9.1e-66 253.8 140 89.3
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.7e-65 252.3 140 89.3
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.5e-65 251.5 140 88.6
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.4e-53 213.4 141 78.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 3.0e-53 212.2 143 76.9
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 6.8e-53 211.1 141 79.4
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 8.9e-53 210.7 141 79.4
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.5e-52 209.9 141 78.7
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 9.8e-52 207.2 142 74.6
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.1e-50 203.8 142 78.2
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.4e-50 202.6 140 76.4
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 2.4e-50 202.6 142 76.1
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 4.6e-49 198.4 141 74.5
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 7.8e-49 197.6 142 74.6
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.7e-48 196.4 145 74.5
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 2.5e-47 192.6 140 72.9
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 3.6e-46 188.7 142 71.8
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.0e-45 187.2 160 65.0
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.4e-45 186.8 163 66.9
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 6.8e-45 184.5 134 71.6
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 8.9e-45 184.1 155 66.5
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 2.6e-44 182.6 144 70.8
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 5.8e-44 181.4 157 64.3
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.3e-43 180.3 158 64.6
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 1.3e-43 180.3 140 70.0
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 3.7e-43 178.7 133 71.4
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 8.3e-43 177.6 157 61.8
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 8.3e-43 177.6 157 61.8
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.1e-42 177.2 151 64.9
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.1e-42 177.2 151 64.9
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 1.1e-42 177.2 148 66.2
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.4e-42 176.8 137 70.8
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.4e-42 176.8 151 64.9
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.4e-42 176.8 135 69.6
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 2.4e-42 176.0 133 69.9
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 4.1e-42 175.3 158 62.7
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 5.4e-42 174.9 151 64.2
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 7.0e-42 174.5 130 72.3
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.0e-41 172.9 134 69.4
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 4.6e-41 171.8 113 78.8
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.6e-41 171.8 133 70.7
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.6e-41 171.8 133 70.7
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 6.0e-41 171.4 130 70.0
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.0e-40 170.6 153 66.7
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.0e-40 170.6 153 66.7
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 1.7e-40 169.9 147 63.3
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.3e-40 169.5 131 70.2
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 3.0e-40 169.1 147 63.3
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 5.0e-40 168.3 131 70.2
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 6.6e-40 167.9 131 71.0
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 6.6e-40 167.9 147 62.6
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 6.6e-40 167.9 132 68.9
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 8.6e-40 167.5 131 67.2
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 8.6e-40 167.5 130 67.7
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 8.6e-40 167.5 131 69.5
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.1e-39 167.2 131 70.2
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.9e-39 166.4 144 61.8
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 4.3e-39 165.2 131 67.2
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 4.3e-39 165.2 102 78.4
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 5.6e-39 164.9 131 69.5
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 5.6e-39 164.9 132 70.5
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 5.6e-39 164.9 130 67.7
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.6e-39 164.9 131 67.2
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 7.3e-39 164.5 131 66.4
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 7.3e-39 164.5 137 64.2
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 7.3e-39 164.5 130 68.5
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 9.5e-39 164.1 154 63.6
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.6e-38 163.3 137 65.0
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 2.1e-38 162.9 131 66.4
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.1e-38 162.9 137 64.2
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 2.1e-38 162.9 134 67.2
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 4.7e-38 161.8 97 84.5
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.7e-38 161.8 131 65.6
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 6.2e-38 161.4 131 66.4
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 8.1e-38 161.0 131 67.2
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 8.1e-38 161.0 131 67.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 1.1e-37 160.6 132 66.7
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.4e-37 160.2 103 77.7
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.4e-37 160.2 134 64.2
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.4e-37 160.2 131 65.6
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 3.1e-37 159.1 131 66.4
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 3.1e-37 159.1 131 66.4
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 3.1e-37 159.1 131 66.4
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 3.1e-37 159.1 131 66.4
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 3.1e-37 159.1 131 66.4
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 3.1e-37 159.1 131 67.9
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 4.0e-37 158.7 131 66.4
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 4.0e-37 158.7 131 66.4
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 4.0e-37 158.7 161 59.0
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 5.2e-37 158.3 131 67.9
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 5.2e-37 158.3 131 66.4
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 5.2e-37 158.3 131 67.9
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 5.2e-37 158.3 131 67.9
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 5.2e-37 158.3 131 66.4
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 5.2e-37 158.3 132 69.7
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 6.8e-37 157.9 131 65.6
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 8.9e-37 157.5 131 67.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.2e-36 157.1 102 78.4
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 1.5e-36 156.8 102 77.5
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 2.6e-36 156.0 137 62.8
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.6e-36 156.0 95 82.1
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 3.4e-36 155.6 141 61.0
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 4.4e-36 155.2 96 83.3
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 4.4e-36 155.2 96 83.3
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 7.5e-36 154.5 95 82.1
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 7.5e-36 154.5 96 81.2
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 2.2e-35 152.9 103 76.7
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 2.9e-35 152.5 135 62.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 4.9e-35 151.8 139 58.3
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.1e-34 150.6 140 57.9
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.4e-34 150.2 132 64.4
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.1e-33 146.4 125 64.0
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.0e-32 144.1 95 73.7
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 5.2e-29 131.7 133 50.4
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 9.9e-28 127.5 139 49.6
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.3e-27 127.1 92 67.4
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.2e-25 120.6 91 64.8
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 1.0e-24 117.5 111 64.9
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.7e-24 116.7 91 60.4
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.7e-24 116.7 116 59.5
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 6.2e-22 108.2 92 54.3
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 6.9e-21 104.8 131 51.9
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.7e-19 100.1 66 72.7
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 2.5e-15 86.3 88 48.9
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 2.8e-14 82.8 89 50.6
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.8e-13 80.1 53 77.4
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 2.0e-12 76.6 51 76.5
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 2.0e-12 76.6 51 76.5
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 6.7e-08 61.6 95 35.8


User provided reference genes

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