Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.2e-79 298.9 148 100.0
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.3e-79 297.4 148 99.3
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.3e-76 289.7 148 95.9
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.4e-65 253.1 140 89.3
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 2.4e-62 242.3 149 84.6
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 3.1e-62 241.9 149 84.6
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 5.3e-62 241.1 149 83.9
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 9.1e-62 240.4 147 82.3
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 2.0e-61 239.2 150 80.0
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 5.9e-61 237.7 149 79.9
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 5.0e-60 234.6 150 82.0
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 6.5e-60 234.2 149 81.9
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.1e-59 233.4 147 82.3
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.9e-59 232.6 151 80.8
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 3.2e-59 231.9 148 80.4
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.2e-58 229.9 148 81.1
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.2e-56 223.4 166 72.3
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.2e-56 223.4 171 73.1
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.5e-56 223.0 148 77.7
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.0e-56 222.6 148 79.1
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 7.5e-56 220.7 140 80.0
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 3.7e-55 218.4 139 82.0
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 1.1e-54 216.9 137 81.0
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 1.8e-54 216.1 150 78.0
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 3.1e-54 215.3 137 81.8
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 7.0e-54 214.2 143 80.4
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 7.0e-54 214.2 154 74.0
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 9.1e-54 213.8 144 77.8
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 9.1e-54 213.8 148 76.4
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 3.5e-53 211.8 137 79.6
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 3.5e-53 211.8 137 79.6
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 3.5e-53 211.8 158 75.3
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 3.5e-53 211.8 158 75.3
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.5e-53 211.5 137 79.6
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 5.9e-53 211.1 139 78.4
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 7.7e-53 210.7 166 69.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.3e-52 209.9 165 67.9
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.7e-52 209.5 165 67.9
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.7e-52 209.5 146 72.6
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.7e-52 209.5 138 79.7
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.7e-52 209.5 137 78.8
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 1.5e-51 206.5 138 77.5
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 4.2e-51 204.9 155 72.9
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 9.4e-51 203.8 143 74.1
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 9.4e-51 203.8 149 73.2
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.2e-50 203.4 144 75.0
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.6e-50 203.0 111 90.1
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.6e-50 203.0 142 76.1
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.6e-50 203.0 144 75.0
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 75.5
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 3.6e-50 201.8 142 73.2
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 4.7e-50 201.4 139 74.8
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 6.1e-50 201.1 139 74.8
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 1.0e-49 200.3 139 74.1
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.0e-49 200.3 142 74.6
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.8e-49 199.5 139 74.1
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.3e-49 199.1 145 73.8
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 3.0e-49 198.7 140 75.7
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 4.0e-49 198.4 143 74.8
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 5.2e-49 198.0 153 68.0
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 6.8e-49 197.6 166 66.3
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 6.8e-49 197.6 142 72.5
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 6.8e-49 197.6 142 74.6
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 8.8e-49 197.2 139 73.4
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 8.8e-49 197.2 153 68.0
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 8.8e-49 197.2 143 73.4
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.2e-48 196.8 153 68.0
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 2.0e-48 196.1 140 72.9
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.0e-48 196.1 141 77.3
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 2.6e-48 195.7 170 65.9
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 2.6e-48 195.7 140 74.3
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.4e-48 194.9 139 74.8
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.3e-47 193.4 140 73.6
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.3e-47 193.4 143 72.7
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.3e-47 193.4 138 76.8
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.7e-47 193.0 107 86.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 2.2e-47 192.6 139 72.7
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 2.2e-47 192.6 139 72.7
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 2.2e-47 192.6 142 73.2
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.2e-47 192.6 167 65.3
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.8e-47 192.2 158 69.6
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 3.7e-47 191.8 142 71.1
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.7e-47 191.8 142 72.5
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.7e-47 191.8 142 72.5
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.7e-47 191.8 142 72.5
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 4.8e-47 191.4 139 72.7
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 4.8e-47 191.4 141 73.0
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 4.8e-47 191.4 139 72.7
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 4.8e-47 191.4 139 72.7
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 4.8e-47 191.4 141 73.0
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 4.8e-47 191.4 139 72.7
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 6.3e-47 191.0 147 69.4
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 6.3e-47 191.0 137 75.2
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 8.3e-47 190.7 111 84.7
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 8.3e-47 190.7 136 74.3
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.1e-46 190.3 136 75.0
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 1.8e-46 189.5 143 71.3
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 3.1e-46 188.7 137 73.0
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 3.1e-46 188.7 136 73.5
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 5.4e-46 188.0 140 72.9
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 5.4e-46 188.0 148 69.6
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.2e-45 186.8 108 86.1
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.2e-45 186.8 103 90.3
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.7e-45 185.7 101 90.1
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 3.5e-45 185.3 143 69.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 2.3e-44 182.6 145 65.5
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 4.2e-43 178.3 146 65.1
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 8.0e-42 174.1 145 62.8
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 1.0e-41 173.7 122 73.0
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 6.6e-36 154.5 144 55.6
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.5e-35 153.3 97 73.2
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 4.3e-35 151.8 138 54.3
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 8.0e-34 147.5 96 71.9
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 8.9e-33 144.1 123 57.7
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 5.8e-32 141.4 165 54.5
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 4.1e-30 135.2 97 62.9
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 6.6e-28 127.9 140 55.0
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.3e-27 125.2 116 61.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 4.3e-27 125.2 72 81.9
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 3.0e-20 102.4 90 54.4
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.1e-17 94.0 89 53.9
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.0e-16 89.7 53 84.9
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 2.9e-15 85.9 51 84.3
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 2.9e-15 85.9 51 84.3
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 2.1e-10 69.7 95 38.9
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 4.2e-06 55.5 138 31.2
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 5.4e-06 55.1 146 30.1


User provided reference genes

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