Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.2e-79 298.9 148 100.0
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.3e-79 297.4 148 99.3
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.8e-76 288.1 148 95.3
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.7e-66 254.6 140 89.3
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 1.8e-62 242.7 149 83.9
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 2.4e-62 242.3 149 83.9
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.1e-62 241.5 149 83.2
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.2e-61 240.0 147 82.3
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 5.9e-61 237.7 150 79.3
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.3e-60 236.5 149 79.9
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 2.9e-60 235.3 150 81.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.5e-59 233.0 147 82.3
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 1.9e-59 232.6 149 81.2
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 2.5e-59 232.3 151 80.8
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 4.2e-59 231.5 148 80.4
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.2e-58 229.9 148 81.1
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 5.2e-57 224.6 148 77.7
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.3e-56 221.9 166 71.7
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 3.3e-56 221.9 171 72.5
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 5.7e-56 221.1 148 78.4
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.2e-55 219.2 140 79.3
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 4.8e-55 218.0 150 78.0
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 6.3e-55 217.6 137 81.0
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 6.3e-55 217.6 139 82.0
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.8e-54 216.1 137 81.8
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 3.1e-54 215.3 144 78.5
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 5.3e-54 214.5 148 76.4
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 7.0e-54 214.2 154 74.0
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 9.1e-54 213.8 145 78.6
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.6e-53 213.0 161 75.2
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.6e-53 213.0 161 75.2
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 2.0e-53 212.6 139 79.1
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.0e-53 212.6 137 79.6
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.0e-53 212.6 137 79.6
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.7e-53 212.2 137 79.6
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 4.5e-53 211.5 167 70.7
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 5.9e-53 211.1 146 73.3
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.0e-52 210.3 138 79.7
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.0e-52 210.3 137 78.8
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.7e-52 209.5 165 67.9
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 2.2e-52 209.1 165 67.9
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 5.0e-52 208.0 138 78.3
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 7.2e-51 204.1 143 74.1
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 1.2e-50 203.4 155 72.3
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.2e-50 203.4 144 74.3
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.6e-50 203.0 111 90.1
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.6e-50 203.0 140 75.7
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.6e-50 203.0 144 74.3
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.1e-50 202.6 149 73.2
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 2.1e-50 202.6 144 76.4
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 2.7e-50 202.2 139 74.8
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.7e-50 202.2 143 75.5
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 3.6e-50 201.8 142 75.4
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 6.1e-50 201.1 139 74.8
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 1.0e-49 200.3 139 74.1
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 2.3e-49 199.1 140 75.7
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 3.0e-49 198.7 141 76.6
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.0e-49 198.7 139 74.1
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.0e-49 198.7 143 74.1
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 4.0e-49 198.4 166 68.1
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 4.0e-49 198.4 142 74.6
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 5.2e-49 198.0 140 75.7
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 5.2e-49 198.0 145 73.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 8.8e-49 197.2 139 73.4
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 8.8e-49 197.2 142 72.5
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 1.2e-48 196.8 153 68.0
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 1.2e-48 196.8 164 68.3
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.5e-48 196.4 103 90.3
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 1.5e-48 196.4 140 75.0
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.0e-48 196.1 141 77.3
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.6e-48 195.7 153 68.0
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 7.5e-48 194.1 138 76.8
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 7.5e-48 194.1 141 73.0
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 9.8e-48 193.7 140 73.6
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.3e-47 193.4 139 72.7
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.3e-47 193.4 139 72.7
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 1.7e-47 193.0 139 72.7
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.7e-47 193.0 142 71.1
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.7e-47 193.0 139 72.7
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-47 193.0 139 72.7
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-47 193.0 139 72.7
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.7e-47 193.0 139 72.7
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.7e-47 193.0 107 86.0
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 2.2e-47 192.6 142 73.9
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.2e-47 192.6 156 69.9
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 2.8e-47 192.2 139 72.7
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.8e-47 192.2 167 65.3
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.8e-47 192.2 136 74.3
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.7e-47 191.8 143 72.0
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 3.7e-47 191.8 136 75.0
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 6.3e-47 191.0 136 74.3
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 8.3e-47 190.7 111 84.7
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 1.1e-46 190.3 142 71.8
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-46 190.3 142 71.8
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 1.1e-46 190.3 142 71.8
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.1e-46 190.3 136 73.5
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-46 189.9 141 72.3
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.4e-46 189.9 141 72.3
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.8e-46 189.5 147 68.7
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 4.1e-46 188.3 140 72.9
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 5.4e-46 188.0 143 70.6
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 7.0e-46 187.6 137 72.3
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 9.1e-46 187.2 103 90.3
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 9.1e-46 187.2 145 71.7
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.2e-45 186.8 108 86.1
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 1.2e-45 186.8 143 69.9
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.7e-45 185.7 101 90.1
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 3.8e-44 181.8 145 64.8
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 9.5e-43 177.2 146 63.7
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 8.0e-42 174.1 122 73.0
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 8.0e-42 174.1 145 62.8
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.1e-35 153.7 144 55.6
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.5e-35 153.3 97 73.2
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 7.3e-35 151.0 138 54.3
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 8.0e-34 147.5 96 71.9
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 2.0e-32 142.9 123 57.7
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 5.8e-32 141.4 165 54.5
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 4.1e-30 135.2 97 62.9
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 2.3e-28 129.4 140 55.7
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.5e-27 126.7 116 61.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 4.3e-27 125.2 72 81.9
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 3.0e-20 102.4 90 54.4
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.1e-17 94.0 89 53.9
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.0e-16 89.7 53 84.9
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 2.2e-15 86.3 51 84.3
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 2.2e-15 86.3 51 84.3
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 2.1e-10 69.7 95 38.9
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 4.2e-06 55.5 138 31.2
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 5.4e-06 55.1 146 30.1
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 5.4e-06 55.1 145 33.1


User provided reference genes

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