Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000611g0030 Nicotiana tabacum HOM05D003316 ORTHO05D003690 1.7e-95 352.8 199 100.0
Nitab4.5_0008429g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.0e-72 276.2 222 72.1
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 5.7e-43 178.3 219 56.6
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 3.7e-42 175.6 219 56.2
Dinv42487 Davidia involucrata HOM05D003316 ORTHO05D003690 3.1e-41 172.6 221 54.8
Dinv19599 Davidia involucrata HOM05D003316 ORTHO05D003690 3.5e-40 169.1 214 54.2
Lj1A910T5 Lonicera japonica HOM05D003316 ORTHO05D003690 1.0e-39 167.5 222 54.5
CSS0004609 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 7.2e-38 161.4 219 53.0
Rhsim06G0241400 Rhododendron simsii HOM05D003316 ORTHO05D003690 9.4e-38 161.0 217 52.1
Actinidia07371 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.2e-37 160.6 215 53.5
CSS0025565 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 1.6e-37 160.2 218 52.8
Peaxi162Scf00452g00411 Petunia axillaris HOM05D003316 ORTHO05D003690 1.0e-36 157.5 219 49.8
MSTRG.7073 Avicennia marina HOM05D003316 ORTHO05D003690 1.4e-36 157.1 219 52.1
PGSC0003DMG400022120 Solanum tuberosum HOM05D003316 ORTHO05D003690 4.0e-36 155.6 213 49.8
Cc05_g16270 Coffea canephora HOM05D003316 ORTHO05D003690 5.2e-36 155.2 224 51.3
Hma1.2p1_0151F.1_g067420 Hydrangea macrophylla HOM05D003316 ORTHO05D003690 1.2e-35 154.1 220 50.0
ECA236G2699 Erigeron canadensis HOM05D003316 ORTHO05D003690 1.3e-34 150.6 230 48.7
MSTRG.16103 Avicennia marina HOM05D003316 ORTHO05D003690 1.7e-34 150.2 218 50.5
Haze_07827 Corylus avellana HOM05D003316 ORTHO05D003690 2.8e-34 149.4 225 49.8
Migut.M01536 Erythranthe guttata HOM05D003316 ORTHO05D003690 6.3e-34 148.3 226 47.8
HanXRQChr11g0335691 Helianthus annuus HOM05D003316 ORTHO05D003690 8.3e-34 147.9 226 49.6
CSS0033846 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 3.1e-33 146.0 190 54.7
QL04p080199 Quercus lobata HOM05D003316 ORTHO05D003690 3.1e-33 146.0 228 46.9
Lsat_1_v5_gn_7_110360 Lactuca sativa HOM05D003316 ORTHO05D003690 7.0e-33 144.8 227 49.3
TPR.G33853 Trifolium pratense HOM05D003316 ORTHO05D003690 9.1e-33 144.4 223 45.3
vmacro11707 Vaccinium macrocarpon HOM05D003316 ORTHO05D003690 9.1e-33 144.4 221 49.8
Migut.H01676 Erythranthe guttata HOM05D003316 ORTHO05D003690 2.7e-32 142.9 224 46.9
SGA_v2.0_scaffold239G44036 Striga asiatica HOM05D003316 ORTHO05D003690 2.7e-32 142.9 225 47.1
Glyma.15G259100 Glycine max HOM05D003316 ORTHO05D003690 5.9e-32 141.7 228 46.9
Actinidia35424 Actinidia chinensis HOM05D003316 ORTHO05D003690 7.7e-32 141.4 214 48.6
Duzib187G1768 Durio zibethinus HOM05D003316 ORTHO05D003690 7.7e-32 141.4 226 46.9
MBI02_g21020_MAGBIO Magnolia biondii HOM05D003316 ORTHO05D003690 1.0e-31 141.0 223 49.8
DCAR_013730 Daucus carota HOM05D003316 ORTHO05D003690 1.3e-31 140.6 218 46.8
CiPaw.11G063000 Carya illinoinensis HOM05D003316 ORTHO05D003690 1.7e-31 140.2 227 45.4
MSTRG.13075 Avicennia marina HOM05D003316 ORTHO05D003690 3.8e-31 139.0 216 45.8
QL04p080175 Quercus lobata HOM05D003316 ORTHO05D003690 3.8e-31 139.0 225 44.9
MD05G1223700 Malus domestica HOM05D003316 ORTHO05D003690 5.0e-31 138.7 227 48.9
Medtr2g066700 Medicago truncatula HOM05D003316 ORTHO05D003690 6.5e-31 138.3 224 44.2
SalBow8G1536 Salvia bowleyana HOM05D003316 ORTHO05D003690 9.5e-30 134.4 217 44.7
Cfa022970 Carpinus fangiana HOM05D003316 ORTHO05D003690 1.2e-29 134.0 223 45.7
Phvul.005G051100 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 1.6e-29 133.7 224 45.1
Lalb_Chr01g0007091 Lupinus albus HOM05D003316 ORTHO05D003690 2.1e-29 133.3 222 45.5
Atru.chr1.123 Acer truncatum HOM05D003316 ORTHO05D003690 2.8e-29 132.9 235 44.3
Gorai.002G106100 Gossypium raimondii HOM05D003316 ORTHO05D003690 3.6e-29 132.5 232 44.8
Gohir.D01G081200 Gossypium hirsutum HOM05D003316 ORTHO05D003690 4.7e-29 132.1 232 44.8
Oeu051683.1 Olea europaea HOM05D003316 ORTHO05D003690 6.1e-29 131.7 210 47.6
Lalb_Chr03g0031631 Lupinus albus HOM05D003316 ORTHO05D003690 8.0e-29 131.3 214 44.9
Solyc07g066570.4 Solanum lycopersicum HOM05D003316 ORTHO05D003690 1.0e-28 131.0 206 46.1
Psat1g005840 Pisum sativum HOM05D003316 ORTHO05D003690 1.8e-28 130.2 226 44.7
Sopen07g034730 Solanum pennellii HOM05D003316 ORTHO05D003690 2.3e-28 129.8 206 45.6
Gohir.A01G096900 Gossypium hirsutum HOM05D003316 ORTHO05D003690 4.0e-28 129.0 232 44.4
Gohir.A13G122600 Gossypium hirsutum HOM05D003316 ORTHO05D003690 5.2e-28 128.6 232 44.8
MSTRG.14558 Avicennia marina HOM05D003316 ORTHO05D003690 6.8e-28 128.3 220 43.6
CsaV3_7G022850 Cucumis sativus L. HOM05D003316 ORTHO05D003690 6.8e-28 128.3 222 43.2
Duzib213G0545 Durio zibethinus HOM05D003316 ORTHO05D003690 8.8e-28 127.9 228 44.7
Gohir.D13G126700 Gossypium hirsutum HOM05D003316 ORTHO05D003690 8.8e-28 127.9 233 45.5
MD10G1205200 Malus domestica HOM05D003316 ORTHO05D003690 8.8e-28 127.9 224 43.3
Potri.007G067300 Populus trichocarpa HOM05D003316 ORTHO05D003690 1.2e-27 127.5 222 45.9
VMungo1080G0561 Vigna mungo HOM05D003316 ORTHO05D003690 1.2e-27 127.5 225 42.7
Lalb_Chr20g0108611 Lupinus albus HOM05D003316 ORTHO05D003690 1.5e-27 127.1 219 45.2
Manes.14G011100 Manihot esculenta HOM05D003316 ORTHO05D003690 1.5e-27 127.1 238 41.6
GSVIVG01036804001 Vitis vinifera HOM05D003316 ORTHO05D003690 1.5e-27 127.1 222 45.0
Lalb_Chr01g0015851 Lupinus albus HOM05D003316 ORTHO05D003690 2.0e-27 126.7 213 44.1
DCAR_016833 Daucus carota HOM05D003316 ORTHO05D003690 2.6e-27 126.3 223 45.7
Gorai.013G141800 Gossypium raimondii HOM05D003316 ORTHO05D003690 3.4e-27 125.9 233 45.5
Nn7g37833 Nelumbo nucifera HOM05D003316 ORTHO05D003690 3.4e-27 125.9 224 46.9
MELO3C012614.2 Cucumis melo HOM05D003316 ORTHO05D003690 9.8e-27 124.4 221 42.5
Lj3g0011134 Lotus japonicus HOM05D003316 ORTHO05D003690 9.8e-27 124.4 220 41.8
QL04p080015 Quercus lobata HOM05D003316 ORTHO05D003690 9.8e-27 124.4 180 46.1
unitig_32.g11082 Utricularia gibba HOM05D003316 ORTHO05D003690 9.8e-27 124.4 217 42.4
CAN.G492.73 Capsicum annuum HOM05D003316 ORTHO05D003690 1.3e-26 124.0 221 45.2
arahy.Tifrunner.gnm1.ann1.JV1AYU Arachis hypogaea HOM05D003316 ORTHO05D003690 2.2e-26 123.2 254 42.1
arahy.Tifrunner.gnm1.ann1.Q78MS7 Arachis hypogaea HOM05D003316 ORTHO05D003690 2.2e-26 123.2 253 42.3
Eucgr.F04447 Eucalyptus grandis HOM05D003316 ORTHO05D003690 2.8e-26 122.9 222 42.3
FAN21G3518 Fragaria x ananassa HOM05D003316 ORTHO05D003690 6.3e-26 121.7 229 42.8
ClCG09G022660 Citrullus lanatus HOM05D003316 ORTHO05D003690 8.3e-26 121.3 221 43.0
Prupe.4G136500 Prunus persica HOM05D003316 ORTHO05D003690 1.1e-25 120.9 221 43.4
FAN25G0335 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.4e-25 120.6 228 43.0
COL.COLO4_07011 Corchorus olitorius HOM05D003316 ORTHO05D003690 1.8e-25 120.2 190 45.8
FAN16G3516 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.8e-25 120.2 229 42.8
RcHm_v2.0_Chr5g0025801 Rosa chinensis HOM05D003316 ORTHO05D003690 2.4e-25 119.8 232 43.1
TWI38G1355 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 2.4e-25 119.8 238 42.0
TWI38G0778 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 3.1e-25 119.4 222 42.8
FvH4_3g15360 Fragaria vesca HOM05D003316 ORTHO05D003690 4.1e-25 119.0 229 42.8
Thecc.06G134000 Theobroma cacao HOM05D003316 ORTHO05D003690 4.1e-25 119.0 211 41.2
unitig_37.g12202 Utricularia gibba HOM05D003316 ORTHO05D003690 4.1e-25 119.0 221 44.3
FAN11G0988 Fragaria x ananassa HOM05D003316 ORTHO05D003690 7.0e-25 118.2 229 42.8
Sed0001262 Sechium edule HOM05D003316 ORTHO05D003690 7.0e-25 118.2 229 41.9
CDE02G3419 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.2e-24 117.5 216 42.6
Duzib192G0114 Durio zibethinus HOM05D003316 ORTHO05D003690 1.6e-24 117.1 210 41.0
Hund12435 Selenicereus undatus HOM05D003316 ORTHO05D003690 1.6e-24 117.1 226 41.6
Lalb_Chr25g0284791 Lupinus albus HOM05D003316 ORTHO05D003690 2.0e-24 116.7 215 40.5
Actinidia12775 Actinidia chinensis HOM05D003316 ORTHO05D003690 2.7e-24 116.3 155 56.1
unitig_8.g4755 Utricularia gibba HOM05D003316 ORTHO05D003690 2.7e-24 116.3 221 39.4
Duzib160G0233 Durio zibethinus HOM05D003316 ORTHO05D003690 3.5e-24 115.9 207 41.5
Thecc.07G169200 Theobroma cacao HOM05D003316 ORTHO05D003690 3.5e-24 115.9 233 43.3
TAR627G0616 Trochodendron aralioides HOM05D003316 ORTHO05D003690 4.5e-24 115.5 213 45.1
Eucgr.F01471 Eucalyptus grandis HOM05D003316 ORTHO05D003690 1.7e-23 113.6 222 44.6
Sp5g34220 Schrenkiella parvula HOM05D003316 ORTHO05D003690 1.7e-23 113.6 232 40.5
EL10Ac8g18492 Beta vulgaris HOM05D003316 ORTHO05D003690 2.9e-23 112.8 239 39.7
PGR031G2416 Punica granatum HOM05D003316 ORTHO05D003690 5.0e-23 112.1 226 40.3
Potri.005G096800 Populus trichocarpa HOM05D003316 ORTHO05D003690 6.6e-23 111.7 224 41.1
THA.LOC104813611 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 8.6e-23 111.3 227 39.6
CDE06G2584 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.5e-22 110.5 217 41.0
Duzib235G1001 Durio zibethinus HOM05D003316 ORTHO05D003690 1.9e-22 110.2 213 42.3
CARHR072810 Cardamine hirsuta HOM05D003316 ORTHO05D003690 2.5e-22 109.8 198 41.4
Cpa.g.c44098 Carica papaya HOM05D003316 ORTHO05D003690 4.3e-22 109.0 185 44.3
Sed0011738 Sechium edule HOM05D003316 ORTHO05D003690 5.6e-22 108.6 212 39.6
AT1G79160 Arabidopsis thaliana HOM05D003316 ORTHO05D003690 9.5e-22 107.8 227 37.4
Potri.011G153600 Populus trichocarpa HOM05D003316 ORTHO05D003690 9.5e-22 107.8 215 41.4
Sc09g0007620 Simmondsia chinensis HOM05D003316 ORTHO05D003690 9.5e-22 107.8 216 38.9
Manes.06G175000 Manihot esculenta HOM05D003316 ORTHO05D003690 2.1e-21 106.7 234 39.3
unitig_749.g13695 Utricularia gibba HOM05D003316 ORTHO05D003690 2.8e-21 106.3 216 39.4
GSVIVG01038001001 Vitis vinifera HOM05D003316 ORTHO05D003690 2.8e-21 106.3 229 40.2
Carub.0001s1625 Capsella rubella HOM05D003316 ORTHO05D003690 3.6e-21 105.9 236 36.9
Potri.001G446800 Populus trichocarpa HOM05D003316 ORTHO05D003690 4.7e-21 105.5 215 40.0
BcaC05g25563 Brassica carinata HOM05D003316 ORTHO05D003690 8.0e-21 104.8 238 37.4
Sabra16G0301800 Salix brachista HOM05D003316 ORTHO05D003690 1.0e-20 104.4 215 38.6
Sp1g14650 Schrenkiella parvula HOM05D003316 ORTHO05D003690 1.4e-20 104.0 247 36.4
Aa31LG7G1040 Aethionema arabicum HOM05D003316 ORTHO05D003690 1.8e-20 103.6 256 37.1
BcaC05g25564 Brassica carinata HOM05D003316 ORTHO05D003690 2.3e-20 103.2 240 37.5
A06p12480 Brassica napus HOM05D003316 ORTHO05D003690 2.3e-20 103.2 236 37.7
Lj3g0011998 Lotus japonicus HOM05D003316 ORTHO05D003690 2.3e-20 103.2 218 37.6
A09p60880 Brassica napus HOM05D003316 ORTHO05D003690 8.9e-20 101.3 240 38.8
BraA06t24411Z Brassica rapa HOM05D003316 ORTHO05D003690 8.9e-20 101.3 235 37.4
BraA09t41461Z Brassica rapa HOM05D003316 ORTHO05D003690 1.2e-19 100.9 240 38.8
Carub.0002s2603 Capsella rubella HOM05D003316 ORTHO05D003690 1.2e-19 100.9 240 35.4
ClCG02G018610 Citrullus lanatus HOM05D003316 ORTHO05D003690 1.2e-19 100.9 231 38.1
Thhalv10008548m.g Eutrema salsugineum HOM05D003316 ORTHO05D003690 2.0e-19 100.1 250 36.4
CsaV3_6G013590 Cucumis sativus L. HOM05D003316 ORTHO05D003690 2.6e-19 99.8 231 37.7
Aa31LG4G1840 Aethionema arabicum HOM05D003316 ORTHO05D003690 3.4e-19 99.4 239 38.5
C05p14730 Brassica napus HOM05D003316 ORTHO05D003690 3.4e-19 99.4 235 36.6
C08p44470 Brassica napus HOM05D003316 ORTHO05D003690 3.4e-19 99.4 237 39.7
BolC5t30193H Brassica oleracea HOM05D003316 ORTHO05D003690 3.4e-19 99.4 235 36.6
Actinidia37126 Actinidia chinensis HOM05D003316 ORTHO05D003690 4.4e-19 99.0 137 52.6
AL2G39640 Arabidopsis lyrata HOM05D003316 ORTHO05D003690 4.4e-19 99.0 231 39.4
SGA_v2.0_scaffold49G18186 Striga asiatica HOM05D003316 ORTHO05D003690 4.4e-19 99.0 180 43.3
AT1G16500 Arabidopsis thaliana HOM05D003316 ORTHO05D003690 7.5e-19 98.2 251 37.1
ECA240G0877 Erigeron canadensis HOM05D003316 ORTHO05D003690 7.5e-19 98.2 142 47.9
MELO3C019643.2 Cucumis melo HOM05D003316 ORTHO05D003690 9.8e-19 97.8 233 37.3
Sabra11G0146100 Salix brachista HOM05D003316 ORTHO05D003690 1.3e-18 97.4 214 37.9
ATR0763G052 Amborella trichopoda HOM05D003316 ORTHO05D003690 1.7e-18 97.1 216 38.0
BcaB02g06634 Brassica carinata HOM05D003316 ORTHO05D003690 2.2e-18 96.7 242 37.2
COL.COLO4_30905 Corchorus olitorius HOM05D003316 ORTHO05D003690 2.2e-18 96.7 216 38.0
BolC8t51988H Brassica oleracea HOM05D003316 ORTHO05D003690 3.7e-18 95.9 237 39.2
CARHR016970 Cardamine hirsuta HOM05D003316 ORTHO05D003690 1.8e-17 93.6 233 35.2
Ciclev10016512m.g Citrus clementina HOM05D003316 ORTHO05D003690 4.1e-17 92.4 221 35.7
BcaB02g08670 Brassica carinata HOM05D003316 ORTHO05D003690 5.4e-17 92.0 236 36.0
unitig_578.g16328 Utricularia gibba HOM05D003316 ORTHO05D003690 1.6e-16 90.5 243 33.7
Lalb_Chr19g0133361 Lupinus albus HOM05D003316 ORTHO05D003690 2.0e-16 90.1 151 43.7
Gohir.A10G048700 Gossypium hirsutum HOM05D003316 ORTHO05D003690 2.7e-16 89.7 227 36.1
HanXRQChr03g0078251 Helianthus annuus HOM05D003316 ORTHO05D003690 3.5e-16 89.4 166 45.2
Sc06g0002770 Simmondsia chinensis HOM05D003316 ORTHO05D003690 4.6e-16 89.0 232 37.1
HanXRQChr13g0409371 Helianthus annuus HOM05D003316 ORTHO05D003690 7.8e-16 88.2 196 38.8
THA.LOC104808128 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 1.0e-15 87.8 246 35.4
SHI21400 Sapria himalayana HOM05D003316 ORTHO05D003690 1.3e-15 87.4 238 35.7
AL1G28660 Arabidopsis lyrata HOM05D003316 ORTHO05D003690 3.0e-15 86.3 252 33.7
Gohir.D10G049400 Gossypium hirsutum HOM05D003316 ORTHO05D003690 3.0e-15 86.3 229 36.2
BcaC08g47478 Brassica carinata HOM05D003316 ORTHO05D003690 3.9e-15 85.9 236 36.0
C06p53030 Brassica napus HOM05D003316 ORTHO05D003690 3.9e-15 85.9 236 36.0
BraA07t31937Z Brassica rapa HOM05D003316 ORTHO05D003690 3.9e-15 85.9 195 37.4
Sed0025744 Sechium edule HOM05D003316 ORTHO05D003690 5.0e-15 85.5 219 37.9
BolC6t40320H Brassica oleracea HOM05D003316 ORTHO05D003690 1.5e-14 84.0 232 35.8
Gorai.011G052900 Gossypium raimondii HOM05D003316 ORTHO05D003690 1.5e-14 84.0 229 34.9
A07p44280 Brassica napus HOM05D003316 ORTHO05D003690 2.5e-14 83.2 195 36.9
Ciclev10005652m.g Citrus clementina HOM05D003316 ORTHO05D003690 2.5e-14 83.2 240 35.8
Sed0022394 Sechium edule HOM05D003316 ORTHO05D003690 4.3e-14 82.4 210 33.8
BcaNung04897 Brassica carinata HOM05D003316 ORTHO05D003690 7.3e-14 81.6 224 36.2
Thhalv10019040m.g Eutrema salsugineum HOM05D003316 ORTHO05D003690 1.6e-13 80.5 171 38.0
BcaC08g45373 Brassica carinata HOM05D003316 ORTHO05D003690 2.1e-13 80.1 191 36.1
CANSAT80G0009 Cannabis sativa HOM05D003316 ORTHO05D003690 2.8e-13 79.7 263 31.2
Phvul.011G172700 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 2.8e-13 79.7 213 35.2
C06p30040 Brassica napus HOM05D003316 ORTHO05D003690 1.4e-12 77.4 185 35.7
BolC6t38165H Brassica oleracea HOM05D003316 ORTHO05D003690 1.4e-12 77.4 185 35.7
Aqoxy1G01506 Aquilegia oxysepala HOM05D003316 ORTHO05D003690 1.8e-12 77.0 193 35.2
Atru.chr10.639 Acer truncatum HOM05D003316 ORTHO05D003690 2.0e-11 73.6 197 35.5
CDE02G2536 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 2.0e-11 73.6 208 34.6
Aqoxy1G01502 Aquilegia oxysepala HOM05D003316 ORTHO05D003690 5.8e-11 72.0 188 34.0
CDE01G0139 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 7.5e-11 71.6 209 32.1
Cpa.g.sc136.61 Carica papaya HOM05D003316 ORTHO05D003690 2.2e-10 70.1 149 40.3
HPP92_004183 Vanilla planifolia HOM05D003316 ORTHO05D003690 3.7e-10 69.3 216 32.9
AUR62016808 Chenopodium quinoa HOM05D003316 ORTHO05D003690 3.2e-09 66.2 206 31.6
CDE12G0925 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.2e-08 64.3 201 30.8
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 2.0e-08 63.5 212 30.7
CDE12G0463 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 7.8e-08 61.6 192 30.2
Manes.16G061900 Manihot esculenta HOM05D003316 ORTHO05D003690 3.9e-07 59.3 172 33.7
HPP92_026353 Vanilla planifolia HOM05D003316 ORTHO05D003690 7.3e-06 55.1 203 30.0


User provided reference genes

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