Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.8e-108 396.0 206 100.0
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 6.9e-92 340.9 192 92.7
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 3.5e-80 302.0 190 81.1
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 2.1e-77 292.7 190 78.9
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 8.2e-77 290.8 190 79.5
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 5.3e-76 288.1 193 79.8
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 1.2e-46 190.7 189 56.1
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 2.2e-45 186.4 192 54.2
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 2.8e-45 186.0 197 51.8
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 4.8e-45 185.3 186 54.8
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 4.8e-45 185.3 183 56.8
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 1.4e-44 183.7 191 56.0
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 2.4e-44 183.0 191 55.5
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 4.1e-44 182.2 189 52.9
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 9.1e-44 181.0 170 57.6
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 1.6e-43 180.3 189 50.8
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 2.0e-43 179.9 189 50.3
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.7e-43 179.5 186 54.3
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 2.7e-43 179.5 189 50.8
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 5.9e-43 178.3 192 53.1
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 5.9e-43 178.3 197 55.8
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 7.7e-43 177.9 185 54.6
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 2.2e-42 176.4 198 54.5
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 2.9e-42 176.0 195 49.2
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 5.0e-42 175.3 183 56.8
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 6.5e-42 174.9 195 52.3
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 6.5e-42 174.9 177 54.8
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 1.1e-41 174.1 188 48.4
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 1.5e-41 173.7 189 50.3
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 9.4e-41 171.0 191 52.4
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 1.2e-40 170.6 189 48.7
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 2.7e-40 169.5 185 53.5
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 4.7e-40 168.7 181 53.0
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 6.1e-40 168.3 189 49.7
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 1.4e-39 167.2 184 51.6
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 1.8e-39 166.8 190 50.5
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 8.8e-39 164.5 188 50.5
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 1.5e-38 163.7 173 51.4
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 2.6e-38 162.9 197 53.3
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 3.4e-38 162.5 190 47.9
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 3.4e-38 162.5 181 48.1
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 3.4e-38 162.5 181 48.1
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 3.4e-38 162.5 189 50.8
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 7.5e-38 161.4 181 47.5
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 1.3e-37 160.6 183 50.8
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 1.7e-37 160.2 181 48.1
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 2.2e-37 159.8 183 49.7
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 2.8e-37 159.5 185 49.2
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 8.3e-37 157.9 184 50.5
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.1e-36 157.5 184 49.5
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 1.4e-36 157.1 187 47.1
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 2.4e-36 156.4 175 50.9
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 5.4e-36 155.2 196 50.5
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 7.0e-36 154.8 190 45.8
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 9.1e-36 154.5 181 47.0
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 1.6e-35 153.7 183 48.6
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 1.6e-35 153.7 190 45.3
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 3.5e-35 152.5 183 48.6
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 5.9e-35 151.8 182 47.3
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 5.9e-35 151.8 182 47.3
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 1.3e-34 150.6 181 47.0
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 1.7e-34 150.2 182 45.1
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 6.5e-34 148.3 194 43.8
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 1.1e-33 147.5 187 44.9
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 1.9e-33 146.7 199 46.7
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 2.5e-33 146.4 189 43.4
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 3.3e-33 146.0 189 43.4
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 5.5e-33 145.2 160 50.0
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 5.5e-33 145.2 185 46.5
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 7.2e-33 144.8 191 45.0
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 7.2e-33 144.8 190 43.7
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 9.5e-33 144.4 184 45.1
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 1.2e-32 144.1 193 45.6
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 2.1e-32 143.3 187 43.3
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 2.8e-32 142.9 192 44.8
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 6.1e-32 141.7 184 45.7
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 6.1e-32 141.7 194 45.9
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 6.1e-32 141.7 186 46.2
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 3.0e-31 139.4 202 40.6
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 6.8e-31 138.3 189 42.9
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 1.2e-30 137.5 188 42.0
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 1.5e-30 137.1 182 44.0
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 2.0e-30 136.7 184 41.8
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 2.6e-30 136.3 186 44.1
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 2.6e-30 136.3 189 42.9
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 3.4e-30 136.0 183 43.2
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 9.8e-30 134.4 188 47.3
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 1.3e-29 134.0 172 43.6
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 1.3e-29 134.0 184 43.5
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 2.2e-29 133.3 190 45.3
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 4.1e-28 129.0 123 57.7
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 5.4e-28 128.6 184 42.4
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 1.2e-27 127.5 174 43.1
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 1.6e-27 127.1 149 45.6
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 4.5e-27 125.6 190 43.2
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.3e-26 123.2 146 45.9
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 5.0e-26 122.1 149 47.0
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 1.0e-23 114.4 111 52.3
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 1.7e-21 107.1 194 38.1
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 2.7e-19 99.8 184 36.4
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 6.0e-19 98.6 195 35.9
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 1.3e-18 97.4 213 34.7
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 2.3e-18 96.7 182 36.3
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 3.0e-18 96.3 183 37.7
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 3.9e-18 95.9 136 41.2
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 2.8e-16 89.7 99 48.5
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 3.6e-16 89.4 206 35.4
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 4.7e-16 89.0 200 33.5
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 6.2e-16 88.6 99 48.5
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 6.2e-16 88.6 224 33.0
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.8e-15 87.0 103 45.6
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 5.2e-15 85.5 94 50.0
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 1.7e-13 80.5 186 32.8
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 1.9e-12 77.0 118 33.1
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.1e-12 75.9 105 40.0
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 2.0e-11 73.6 67 61.2
Pp3c14_11090 Physcomitrium patens HOM05D005869 ORTHO05D007229 2.5e-09 66.6 115 37.4
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 1.2e-08 64.3 65 55.4
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 2.3e-07 60.1 67 49.3
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 4.0e-07 59.3 69 44.9
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 2.6e-06 56.6 197 26.4
SEGI_05009 Sequoiadendron giganteum HOM05D005869 ORTHO05D007229 7.5e-06 55.1 97 36.1


User provided reference genes

Program Settings