Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000593g0290 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.3e-83 311.6 154 100.0
Nitab4.5_0001519g0220 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.1e-14 84.0 111 38.7
PGSC0003DMG400026063 Solanum tuberosum HOM05D009389 ORTHO05D004636 3.3e-14 82.4 103 43.7
Nitab4.5_0004274g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.3e-14 82.0 67 55.2
Nitab4.5_0001962g0120 Nicotiana tabacum HOM05D000003 ORTHO05D000022 5.3e-12 75.1 83 49.4
Nitab4.5_0005472g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 6.9e-12 74.7 67 52.2
Nitab4.5_0013367g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.2e-11 73.9 100 39.0
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 2.0e-11 73.2 106 35.8
Nitab4.5_0000629g0070 Nicotiana tabacum HOM05D009389 ORTHO05D012243 1.7e-10 70.1 87 41.4
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 2.2e-10 69.7 114 32.5
Nitab4.5_0000163g0160 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.8e-10 68.9 105 37.1
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 3.8e-10 68.9 109 35.8
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.8e-10 68.9 106 34.0
CAN.G1264.3 Capsicum annuum HOM05D002076 ORTHO05D002087 4.9e-10 68.6 80 41.2
CAN.G108.54 Capsicum annuum HOM05D000003 ORTHO05D000006 6.4e-10 68.2 88 37.5
Nitab4.5_0010074g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 1.1e-09 67.4 109 35.8
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.4e-09 67.0 111 36.0
Nitab4.5_0001919g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.2e-09 65.5 79 43.0
Nitab4.5_0000574g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 7.1e-09 64.7 72 45.8
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 7.1e-09 64.7 70 44.3
Nitab4.5_0002968g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.1e-08 63.2 112 30.4
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 2.7e-08 62.8 109 33.0
Nitab4.5_0001468g0150 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.5e-08 62.4 111 35.1
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.6e-08 62.0 115 37.4
Nitab4.5_0000640g0160 Nicotiana tabacum HOM05D000003 ORTHO05D000022 6.0e-08 61.6 63 47.6
Nitab4.5_0002089g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 7.9e-08 61.2 68 44.1
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 7.9e-08 61.2 143 28.0
QL10p048631 Quercus lobata HOM05D027877 ORTHO05D000022 7.9e-08 61.2 100 36.0
Nitab4.5_0005955g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.0e-07 60.8 109 34.9
Nitab4.5_0000273g0050 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.3e-07 60.5 59 45.8
Nitab4.5_0001175g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.0e-07 59.3 75 37.3
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 3.9e-07 58.9 115 31.3
Nitab4.5_0002028g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.9e-07 58.9 68 41.2
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 5.1e-07 58.5 79 44.3
Nitab4.5_0002499g0140 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.1e-07 58.5 79 39.2
Nitab4.5_0007618g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.1e-07 58.5 79 39.2
Nitab4.5_0013383g0010 Nicotiana tabacum HOM05D012456 ORTHO05D004636 5.1e-07 58.5 69 37.7
Nitab4.5_0026829g0010 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.1e-07 58.5 68 39.7
Nitab4.5_0010207g0010 Nicotiana tabacum HOM05D009389 ORTHO05D012243 6.7e-07 58.2 76 39.5
Nitab4.5_0011109g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.7e-07 58.2 79 35.4
Nitab4.5_0002611g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 8.7e-07 57.8 67 43.3
CAN.G79.41 Capsicum annuum HOM05D001795 ORTHO05D001741 1.1e-06 57.4 100 31.0
Solyc05g039970.1 Solanum lycopersicum HOM05D008381 ORTHO05D004636 1.1e-06 57.4 67 41.8
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-06 57.0 109 37.6
Nitab4.5_0001032g0100 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.9e-06 56.6 99 32.3
Nitab4.5_0001684g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.9e-06 56.6 89 32.6
Nitab4.5_0005185g0060 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.9e-06 56.6 68 42.6
QL09p018494 Quercus lobata HOM05D000003 ORTHO05D000022 1.9e-06 56.6 74 37.8
PGSC0003DMG400029619 Solanum tuberosum HOM05D008381 ORTHO05D004636 1.9e-06 56.6 95 32.6
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-06 56.2 81 40.7
CAN.G1088.1 Capsicum annuum HOM05D000024 ORTHO05D000006 2.5e-06 56.2 68 35.3
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.5e-06 56.2 67 37.3
Nitab4.5_0002269g0040 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.5e-06 56.2 95 29.5
QL02p017925 Quercus lobata HOM05D000003 ORTHO05D000022 2.5e-06 56.2 71 40.8
Nitab4.5_0000009g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.6e-06 55.1 100 30.0
Nitab4.5_0003210g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.6e-06 55.1 126 29.4
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 7.4e-06 54.7 111 33.3
QL04p047149 Quercus lobata HOM05D000003 ORTHO05D000022 7.4e-06 54.7 103 30.1
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 9.6e-06 54.3 115 33.0


User provided reference genes

Program Settings