Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000592g0240 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.9e-68 262.3 128 100.0
Nitab4.5_0003594g0030 Nicotiana tabacum HOM05D000804 ORTHO05D005389 7.9e-54 213.8 114 91.2
CAN.G700.21 Capsicum annuum HOM05D000804 ORTHO05D005389 5.0e-48 194.5 115 83.5
Solyc01g081050.4 Solanum lycopersicum HOM05D000804 ORTHO05D005389 7.9e-46 187.2 114 77.2
Peaxi162Scf00592g00212 Petunia axillaris HOM05D000804 ORTHO05D005389 1.3e-40 169.9 109 76.1
Nn1g09657 Nelumbo nucifera HOM05D000804 ORTHO05D005389 4.8e-27 124.8 123 48.8
CSS0037336 Camellia sinensis var. sinensis HOM05D000804 ORTHO05D005389 1.2e-25 120.2 110 57.3
vmacro21110 Vaccinium macrocarpon HOM05D000804 ORTHO05D005389 1.5e-25 119.8 107 57.9
Dinv43539 Davidia involucrata HOM05D000804 ORTHO05D005389 2.9e-24 115.5 109 55.0
Actinidia21598 Actinidia chinensis HOM05D000804 ORTHO05D005389 8.5e-24 114.0 111 53.2
TAR375G0260 Trochodendron aralioides HOM05D000804 ORTHO05D005389 2.7e-22 109.0 111 50.5
Oeu024961.1 Olea europaea HOM05D000804 ORTHO05D005389 4.7e-22 108.2 111 53.2
Haze_15812 Corylus avellana HOM05D000804 ORTHO05D005389 1.8e-21 106.3 104 53.8
Cfa003676 Carpinus fangiana HOM05D000804 ORTHO05D005389 8.8e-21 104.0 104 53.8
DCAR_029554 Daucus carota HOM05D000804 ORTHO05D005389 1.5e-20 103.2 108 45.4
MSTRG.4983 Avicennia marina HOM05D000804 ORTHO05D005389 2.6e-20 102.4 115 50.4
Migut.N01690 Erythranthe guttata HOM05D000804 ORTHO05D005389 2.6e-20 102.4 109 50.5
Psat4g196240 Pisum sativum HOM05D000804 ORTHO05D005389 7.4e-20 100.9 100 50.0
SalBow4G2892 Salvia bowleyana HOM05D000804 ORTHO05D005389 1.3e-19 100.1 110 47.3
Rhsim01G0135000 Rhododendron simsii HOM05D000804 ORTHO05D005389 1.7e-19 99.8 117 50.4
VMungo0331G0574 Vigna mungo HOM05D000804 ORTHO05D005389 2.2e-19 99.4 111 48.6
Ca_23822_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 4.8e-19 98.2 100 51.0
Ca_23827_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 4.8e-19 98.2 100 51.0
PGR083G1621 Punica granatum HOM05D000804 ORTHO05D005389 1.4e-18 96.7 113 46.0
Migut.O00426 Erythranthe guttata HOM05D000804 ORTHO05D005389 1.8e-18 96.3 101 50.5
Eucgr.D01046 Eucalyptus grandis HOM05D000804 ORTHO05D005389 9.1e-18 94.0 102 46.1
Cc02_g26260 Coffea canephora HOM05D000804 ORTHO05D005389 1.2e-17 93.6 108 46.3
arahy.Tifrunner.gnm1.ann1.A8SNFY Arachis hypogaea HOM05D000804 ORTHO05D005389 2.0e-17 92.8 106 42.5
arahy.Tifrunner.gnm1.ann1.00QVML Arachis hypogaea HOM05D000804 ORTHO05D005389 4.5e-17 91.7 106 41.5
Potri.019G043800 Populus trichocarpa HOM05D000804 ORTHO05D005389 4.5e-17 91.7 104 46.2
TPR.G30883 Trifolium pratense HOM05D000804 ORTHO05D005389 4.5e-17 91.7 100 49.0
Lj3g0026096 Lotus japonicus HOM05D000804 ORTHO05D005389 5.9e-17 91.3 105 47.6
Sed0024810 Sechium edule HOM05D000804 ORTHO05D005389 5.9e-17 91.3 106 46.2
SGA_v2.0_scaffold4G02207 Striga asiatica HOM05D000804 ORTHO05D005389 5.9e-17 91.3 105 48.6
Glyma.03G021000 Glycine max HOM05D000804 ORTHO05D005389 1.0e-16 90.5 106 46.2
PSO063G5197 Papaver somniferum HOM05D000804 ORTHO05D005389 1.0e-16 90.5 109 44.0
HPP92_005377 Vanilla planifolia HOM05D000804 ORTHO05D005389 2.9e-16 89.0 107 42.1
Cpa.g.sc73.83 Carica papaya HOM05D000804 ORTHO05D005389 3.8e-16 88.6 106 49.1
Medtr8g035620 Medicago truncatula HOM05D000804 ORTHO05D005389 3.8e-16 88.6 100 45.0
HPP92_005379 Vanilla planifolia HOM05D000804 ORTHO05D005389 5.0e-16 88.2 107 42.1
HPP92_005437 Vanilla planifolia HOM05D000804 ORTHO05D005389 5.0e-16 88.2 107 42.1
Ciclev10030562m.g Citrus clementina HOM05D000804 ORTHO05D005389 6.5e-16 87.8 102 50.0
Lsat_1_v5_gn_1_84561 Lactuca sativa HOM05D000804 ORTHO05D005389 6.5e-16 87.8 107 43.0
ClCG06G008140 Citrullus lanatus HOM05D000804 ORTHO05D005389 8.5e-16 87.4 106 46.2
CsaV3_2G011020 Cucumis sativus L. HOM05D000804 ORTHO05D005389 8.5e-16 87.4 97 48.5
Duzib128G1116 Durio zibethinus HOM05D000804 ORTHO05D005389 8.5e-16 87.4 105 45.7
ATR0829G026 Amborella trichopoda HOM05D000804 ORTHO05D005389 1.9e-15 86.3 101 45.5
MELO3C020372.2 Cucumis melo HOM05D000804 ORTHO05D005389 1.9e-15 86.3 95 48.4
Aqoxy3G02136 Aquilegia oxysepala HOM05D000804 ORTHO05D005389 5.5e-15 84.7 100 44.0
CDE12G0088 Ceratophyllum demersum HOM05D000804 ORTHO05D005389 5.5e-15 84.7 105 42.9
AUR62028598 Chenopodium quinoa HOM05D000804 ORTHO05D005389 5.5e-15 84.7 106 44.3
THA.LOC104825451 Tarenaya hassleriana HOM05D000804 ORTHO05D005389 5.5e-15 84.7 108 45.4
Manes.09G131500 Manihot esculenta HOM05D000804 ORTHO05D005389 7.2e-15 84.3 111 45.0
Sabra19G0054400 Salix brachista HOM05D000804 ORTHO05D005389 7.2e-15 84.3 104 43.3
Aa31LG9G17950 Aethionema arabicum HOM05D000804 ORTHO05D005389 1.0e-13 80.5 105 44.8
Sc17g0001320 Simmondsia chinensis HOM05D000804 ORTHO05D005389 1.4e-13 80.1 100 43.0
arahy.Tifrunner.gnm1.ann1.WIDJ0V Arachis hypogaea HOM05D000804 ORTHO05D005389 2.3e-13 79.3 102 41.2
Thhalv10003545m.g Eutrema salsugineum HOM05D000804 ORTHO05D005389 2.3e-13 79.3 105 45.7
Lalb_Chr07g0189561 Lupinus albus HOM05D000804 ORTHO05D005389 2.3e-13 79.3 100 42.0
Gohir.A13G075600 Gossypium hirsutum HOM05D000804 ORTHO05D005389 4.0e-13 78.6 102 40.2
Atru.chr2.1715 Acer truncatum HOM05D000804 ORTHO05D005389 1.5e-12 76.6 111 40.5
EL10Ac5g10540 Beta vulgaris HOM05D000804 ORTHO05D005389 1.5e-12 76.6 106 41.5
Gohir.D13G099900 Gossypium hirsutum HOM05D000804 ORTHO05D005389 1.5e-12 76.6 102 39.2
Gorai.013G111900 Gossypium raimondii HOM05D000804 ORTHO05D005389 1.5e-12 76.6 102 39.2
TWI32G1345 Tripterygium wilfordii HOM05D000804 ORTHO05D005389 7.5e-12 74.3 103 41.7
QL04p052206 Quercus lobata HOM05D000804 ORTHO05D005389 1.3e-11 73.6 99 40.4
GSVIVG01011337001 Vitis vinifera HOM05D000804 ORTHO05D005389 1.7e-11 73.2 102 43.1
Sp7g06220 Schrenkiella parvula HOM05D000804 ORTHO05D005389 2.2e-11 72.8 113 38.1
CiPaw.01G087500 Carya illinoinensis HOM05D000804 ORTHO05D005389 6.3e-11 71.2 91 45.1
Carub.0007s3171 Capsella rubella HOM05D000804 ORTHO05D005389 2.4e-10 69.3 95 44.2
AT5G35930 Arabidopsis thaliana HOM05D000804 ORTHO05D005389 4.1e-10 68.6 95 41.1
CARHR216700 Cardamine hirsuta HOM05D000804 ORTHO05D005389 4.1e-10 68.6 97 37.1
ECA248G3066 Erigeron canadensis HOM05D000804 ORTHO05D005389 4.1e-10 68.6 101 44.6
AL7G44840 Arabidopsis lyrata HOM05D000804 ORTHO05D005389 1.3e-08 63.5 101 39.6
BcaC07g37646 Brassica carinata HOM05D000804 ORTHO05D005389 1.7e-08 63.2 111 36.9
BcaB04g18017 Brassica carinata HOM05D000804 ORTHO05D005389 3.8e-08 62.0 110 35.5
BcaC07g37648 Brassica carinata HOM05D000804 ORTHO05D005389 3.8e-08 62.0 110 35.5
BolC8t48020H Brassica oleracea HOM05D000804 ORTHO05D005389 3.8e-08 62.0 110 35.5
A08p09490 Brassica napus HOM05D000804 ORTHO05D005389 5.0e-08 61.6 107 35.5
Ah.02g110870 Amaranthus hybridus HOM05D000804 ORTHO05D005389 6.5e-08 61.2 106 35.8
BraA08t32948Z Brassica rapa HOM05D000804 ORTHO05D005389 8.5e-08 60.8 107 35.5
HanXRQChr01g0020521 Helianthus annuus HOM05D000804 ORTHO05D005389 8.5e-08 60.8 100 39.0
unitig_22.g5901 Utricularia gibba HOM05D000804 ORTHO05D005389 3.2e-07 58.9 103 39.8
FAN06G2879 Fragaria x ananassa HOM05D000804 ORTHO05D005389 4.2e-07 58.5 87 42.5
FAN10G1244 Fragaria x ananassa HOM05D000804 ORTHO05D005389 4.2e-07 58.5 87 42.5
Prupe.2G098200 Prunus persica HOM05D000804 ORTHO05D005389 9.4e-07 57.4 96 36.5
FAN01G2963 Fragaria x ananassa HOM05D000804 ORTHO05D005389 8.0e-06 54.3 87 41.4


User provided reference genes

Program Settings