Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.7e-190 669.1 318 100.0
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.1e-181 639.8 314 96.8
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 6.5e-174 614.0 316 91.8
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 3.6e-172 608.2 314 91.4
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 1.0e-171 606.7 314 91.1
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 2.0e-143 512.7 314 74.8
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 2.7e-143 512.3 314 75.8
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 7.8e-143 510.8 313 75.1
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 3.8e-142 508.4 315 76.5
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 4.3e-141 505.0 313 74.1
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 7.3e-141 504.2 316 73.1
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 8.0e-140 500.7 316 73.1
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 2.3e-139 499.2 316 72.8
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 3.0e-139 498.8 314 75.2
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 5.2e-139 498.0 318 74.2
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 5.2e-139 498.0 313 74.8
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 6.8e-139 497.7 304 74.0
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 7.5e-138 494.2 366 65.8
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 9.8e-138 493.8 313 71.2
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 9.8e-138 493.8 313 72.8
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 1.3e-137 493.4 314 72.9
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 2.2e-137 492.7 313 72.2
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 2.2e-137 492.7 313 73.5
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 2.9e-137 492.3 313 72.2
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 4.9e-137 491.5 314 73.2
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 1.4e-136 490.0 314 72.3
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 1.4e-136 490.0 315 72.1
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 1.4e-136 490.0 314 73.6
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 7.0e-136 487.6 313 70.9
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 9.2e-136 487.3 313 72.5
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 1.6e-135 486.5 366 63.1
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 2.0e-135 486.1 314 73.6
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 2.0e-135 486.1 314 72.3
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 2.0e-135 486.1 314 71.3
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 2.7e-135 485.7 314 70.1
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 6.0e-135 484.6 314 71.0
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 1.0e-134 483.8 313 72.8
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 1.3e-134 483.4 313 71.2
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 1.7e-134 483.0 313 71.9
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 2.3e-134 482.6 315 70.2
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 3.0e-134 482.3 314 72.3
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 3.9e-134 481.9 315 72.4
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 3.9e-134 481.9 313 70.0
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 5.0e-134 481.5 318 69.5
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 5.0e-134 481.5 313 71.9
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 6.6e-134 481.1 313 71.6
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 1.1e-133 480.3 335 68.4
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 1.5e-133 479.9 314 71.3
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 1.5e-133 479.9 313 71.2
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 1.5e-133 479.9 313 72.2
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 1.5e-133 479.9 313 71.9
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 2.5e-133 479.2 314 68.8
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 7.3e-133 477.6 313 71.9
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 7.3e-133 477.6 313 70.3
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 1.2e-132 476.9 313 70.9
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.2e-132 476.9 313 70.3
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 1.2e-132 476.9 314 70.7
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 1.6e-132 476.5 313 69.3
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 1.6e-132 476.5 318 69.5
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 2.8e-132 475.7 313 70.3
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 2.8e-132 475.7 313 69.6
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 3.6e-132 475.3 313 69.6
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 3.6e-132 475.3 313 70.0
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 3.6e-132 475.3 313 69.6
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 3.6e-132 475.3 313 70.6
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 1.4e-131 473.4 313 69.6
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 1.4e-131 473.4 310 71.0
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 1.8e-131 473.0 313 69.0
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 1.8e-131 473.0 320 70.6
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 1.2e-130 470.3 313 68.4
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 1.2e-130 470.3 310 70.3
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 1.5e-130 469.9 313 69.6
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 3.4e-130 468.8 313 69.0
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 4.4e-130 468.4 313 69.0
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 5.8e-130 468.0 328 65.5
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 5.8e-130 468.0 315 68.6
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 7.5e-130 467.6 317 68.5
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 9.8e-130 467.2 313 69.3
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 1.3e-129 466.8 313 68.7
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 1.3e-129 466.8 315 68.6
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 1.3e-129 466.8 320 67.8
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 1.7e-129 466.5 313 69.0
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 2.9e-129 465.7 313 68.4
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 3.7e-129 465.3 313 68.1
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 3.7e-129 465.3 313 72.2
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 4.9e-129 464.9 313 68.7
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 1.4e-128 463.4 313 68.4
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 1.4e-128 463.4 313 68.4
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 3.2e-128 462.2 313 68.4
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 3.2e-128 462.2 316 66.5
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 7.0e-128 461.1 313 67.7
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 9.2e-128 460.7 312 67.9
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 1.2e-127 460.3 313 69.3
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 2.0e-127 459.5 313 67.7
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 2.7e-127 459.1 314 68.5
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 4.6e-127 458.4 313 67.4
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 4.6e-127 458.4 313 67.4
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 1.0e-126 457.2 314 68.2
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 1.3e-126 456.8 312 66.7
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 2.1e-124 449.5 313 66.1
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 4.7e-124 448.4 308 68.5
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 1.1e-123 447.2 313 69.6
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 1.4e-123 446.8 315 65.4
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 1.8e-123 446.4 313 67.4
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 1.8e-123 446.4 315 67.0
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 2.3e-123 446.0 386 58.3
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 3.1e-123 445.7 313 66.8
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 5.2e-123 444.9 313 66.5
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 8.9e-123 444.1 315 65.4
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.0e-122 443.0 313 68.1
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 2.0e-122 443.0 315 65.1
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 7.5e-122 441.0 312 66.0
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 2.2e-121 439.5 313 66.5
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 2.9e-121 439.1 284 72.2
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 5.4e-120 434.9 318 64.2
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 6.0e-119 431.4 334 63.8
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.3e-118 429.5 313 66.1
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 5.1e-118 428.3 291 66.3
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 4.3e-117 425.2 315 66.0
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 4.3e-117 425.2 313 66.1
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 9.5e-117 424.1 289 66.4
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 1.9e-112 409.8 403 51.9
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 9.2e-112 407.5 268 70.5
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 4.6e-111 405.2 322 60.6
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 9.6e-109 397.5 313 61.3
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 1.2e-108 397.1 290 66.2
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 1.1e-107 394.0 335 56.4
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 6.0e-103 378.3 328 56.7
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 2.1e-100 369.8 319 58.3
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 4.0e-99 365.5 316 55.1
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 4.0e-99 365.5 319 53.9
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 1.2e-98 364.0 317 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 7.6e-98 361.3 314 56.1
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 4.6e-95 352.1 300 58.7
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 1.3e-94 350.5 243 68.7
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 6.7e-94 348.2 225 70.2
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 8.7e-94 347.8 314 54.1
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 2.0e-90 336.7 290 56.9
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 9.9e-90 334.3 354 46.3
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 2.3e-78 296.6 200 68.5
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 2.5e-77 293.1 214 65.0
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 2.8e-76 289.7 185 71.9
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 8.5e-73 278.1 183 71.6
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.3e-70 270.0 138 90.6
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 3.8e-65 252.7 165 70.3
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 1.9e-64 250.4 187 63.6
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 6.3e-60 235.3 305 44.9
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 9.1e-59 231.5 151 71.5
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 3.5e-58 229.6 146 73.3
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 6.7e-46 188.7 146 58.9
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 4.7e-39 166.0 130 61.5
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 1.5e-37 161.0 99 70.7
HPP92_003722 Vanilla planifolia HOM05D004085 ORTHO05D005189 7.5e-37 158.7 124 59.7
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 4.2e-32 142.9 110 60.0
MD05G1127700 Malus domestica HOM05D004085 ORTHO05D005189 4.7e-31 139.4 92 69.6
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 9.8e-29 131.7 69 82.6
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 1.3e-28 131.3 105 61.0
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 4.9e-28 129.4 75 73.3
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 1.4e-27 127.9 86 69.8
Thecc.03G108100 Theobroma cacao HOM05D004085 ORTHO05D026373 1.8e-22 110.9 90 54.4
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 3.1e-22 110.2 67 70.1
SEGI_34269 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 2.9e-20 103.6 58 75.9
Actinidia04797 Actinidia chinensis HOM05D004085 ORTHO05D026373 2.4e-19 100.5 71 62.0
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 9.2e-19 98.6 165 35.2
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 2.3e-17 94.0 72 59.7
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 3.2e-11 73.6 43 74.4
HPP92_003723 Vanilla planifolia HOM05D004085 ORTHO05D005189 4.6e-10 69.7 80 48.8
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 3.9e-09 66.6 55 58.2
Eucgr.B03119 Eucalyptus grandis HOM05D004085 ORTHO05D195170 2.1e-07 60.8 56 55.4


User provided reference genes

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