Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 6.6e-268 926.8 465 100.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.5e-211 739.6 458 79.5
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.8e-201 706.1 463 77.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.5e-198 696.4 458 74.9
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.9e-198 696.0 460 74.8
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 9.2e-169 597.4 470 66.2
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 2.3e-167 592.8 465 65.8
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 5.1e-167 591.7 456 64.9
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.5e-166 590.1 456 64.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.9e-166 589.7 456 64.9
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 3.3e-166 589.0 461 64.0
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 7.3e-166 587.8 459 64.5
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.8e-165 585.9 387 73.1
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.0e-164 582.0 451 63.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 7.6e-163 577.8 449 63.9
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.7e-162 576.6 446 65.0
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.1e-161 573.9 447 63.3
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 2.1e-160 569.7 457 60.6
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.7e-160 569.3 447 62.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.6e-160 568.5 449 61.9
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.7e-159 566.6 459 61.4
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.6e-159 564.7 456 59.9
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.5e-158 563.5 451 61.0
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 7.3e-158 561.2 456 62.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 9.6e-158 560.8 449 61.0
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.4e-156 557.0 449 60.6
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 2.4e-156 556.2 456 62.3
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.0e-156 555.4 452 60.4
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.5e-155 553.5 450 60.0
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-154 550.4 455 60.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 2.9e-154 549.3 449 60.4
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 8.4e-154 547.7 460 59.8
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.4e-153 547.0 451 60.3
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.9e-153 546.6 457 58.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.2e-153 545.8 455 60.0
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.2e-153 545.8 453 60.0
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.7e-152 542.7 456 60.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.5e-152 542.3 452 59.7
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 6.0e-152 541.6 458 59.4
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 6.6e-151 538.1 454 59.3
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.9e-150 536.6 452 58.6
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.3e-150 535.8 455 58.9
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.3e-150 535.4 455 59.1
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 4.3e-150 535.4 452 59.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 4.3e-150 535.4 448 59.4
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 4.3e-150 535.4 460 57.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.3e-149 533.9 453 58.7
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.6e-149 532.3 448 59.2
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 3.6e-149 532.3 459 57.3
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 6.2e-149 531.6 449 58.8
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 8.1e-149 531.2 352 70.7
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.4e-148 529.6 354 70.1
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 3.1e-148 529.3 449 59.9
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.2e-147 527.3 450 59.1
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 2.6e-147 526.2 354 66.9
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 7.6e-147 524.6 448 59.2
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.7e-146 523.5 447 59.7
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 2.2e-146 523.1 357 68.1
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.9e-146 522.7 448 59.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 4.9e-146 521.9 446 56.7
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 4.9e-146 521.9 460 55.9
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 6.4e-146 521.5 444 58.1
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.1e-145 520.8 448 58.3
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.9e-145 520.0 356 67.7
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-145 519.2 444 59.9
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 4.2e-145 518.8 448 58.7
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 4.2e-145 518.8 448 58.7
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 4.2e-145 518.8 448 58.7
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 4.2e-145 518.8 341 70.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 5.4e-145 518.5 447 57.5
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 9.3e-145 517.7 447 58.2
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.2e-144 517.3 356 67.4
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.6e-144 516.9 455 55.8
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.7e-144 516.2 441 61.0
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.5e-144 515.8 448 59.8
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 6.0e-144 515.0 448 58.9
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 6.0e-144 515.0 446 58.5
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.3e-143 513.8 448 58.7
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.7e-143 513.5 351 67.2
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.1e-142 510.8 346 68.5
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.9e-142 510.0 390 65.1
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.6e-142 508.4 454 56.6
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.6e-142 508.4 454 56.8
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.3e-141 507.3 446 55.6
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 2.8e-141 506.1 448 57.1
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.6e-141 505.8 447 56.8
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 4.8e-141 505.4 451 56.3
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 8.1e-141 504.6 370 63.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.1e-140 504.2 347 66.9
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.4e-140 503.8 444 55.9
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.8e-140 503.4 347 66.9
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.4e-140 503.1 447 56.4
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 3.1e-140 502.7 415 60.7
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 5.3e-140 501.9 451 55.4
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 5.3e-140 501.9 451 55.4
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 5.3e-140 501.9 451 55.4
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 6.9e-140 501.5 450 54.2
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.2e-139 500.7 476 55.3
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 4.5e-139 498.8 346 66.8
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 5.8e-139 498.4 345 66.4
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 7.6e-139 498.0 448 56.2
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 7.6e-139 498.0 455 55.8
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.8e-138 495.7 444 56.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.4e-138 495.0 454 55.9
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.4e-137 493.0 347 64.0
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 9.3e-137 491.1 447 55.5
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.0e-135 487.6 447 54.4
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.3e-135 487.3 349 65.0
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.9e-135 485.7 456 52.9
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.1e-134 484.2 443 54.2
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.3e-134 482.6 384 59.9
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 5.6e-134 481.9 332 66.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 9.6e-134 481.1 458 55.7
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.3e-133 480.7 346 65.3
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 4.8e-133 478.8 449 53.0
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.8e-132 476.9 455 54.5
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-132 476.9 443 55.5
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 4.0e-132 475.7 446 52.5
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 5.8e-131 471.9 447 55.0
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 2.9e-130 469.5 342 62.9
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-130 468.8 444 54.5
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.8e-127 460.3 360 60.0
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-127 459.9 448 53.1
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-126 457.2 442 53.2
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-126 455.7 442 55.0
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-125 454.1 445 53.5
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-125 452.6 444 53.2
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 4.8e-125 452.2 349 62.5
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 8.2e-125 451.4 345 62.3
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.0e-123 446.8 350 58.9
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.6e-123 446.4 347 59.7
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.7e-122 443.7 459 52.1
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-122 443.4 443 53.7
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 9.3e-121 438.0 446 52.9
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.1e-120 436.8 450 48.4
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.5e-115 420.6 292 64.4
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.5e-113 413.3 341 57.8
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 7.2e-113 411.8 250 74.0
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.6e-112 409.5 341 57.8
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.4e-110 401.7 389 53.2
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.8e-109 399.8 454 48.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.0e-106 391.3 343 53.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.0e-103 379.8 343 51.9
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 2.8e-101 373.2 343 51.0
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.1e-100 371.3 250 64.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-99 367.5 375 47.2
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.5e-99 365.9 308 55.8
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.5e-99 365.9 343 49.9
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 6.7e-95 352.1 240 65.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 5.7e-94 349.0 343 48.7
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.8e-93 345.9 240 65.4
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-92 344.7 377 45.4
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.8e-92 344.0 313 58.8
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 7.0e-92 342.0 237 63.7
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.7e-91 340.1 361 45.7
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.1e-88 330.5 386 45.1
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.7e-88 329.3 341 46.6
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 5.7e-86 322.4 237 60.8
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.7e-83 313.5 349 45.3
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 7.2e-81 305.4 385 44.4
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.5e-78 297.7 299 47.5
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.3e-74 283.9 364 42.0
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.8e-74 283.1 346 39.0
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-73 281.6 345 41.7
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 4.3e-73 279.6 240 51.2
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.6e-73 279.3 341 41.1
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.4e-71 274.6 345 38.8
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-69 267.7 343 39.9
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.4e-62 243.0 345 35.7
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 7.0e-60 235.7 356 36.2
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 6.9e-39 166.0 147 57.1
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.7e-37 161.4 154 53.9
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.9e-33 147.9 416 27.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.1e-24 117.9 85 56.5
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.1e-23 114.0 114 44.7
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.9e-20 104.8 147 46.3
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 3.0e-18 97.4 79 48.1
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.6e-17 93.2 120 35.8
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-16 92.0 100 41.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.3e-10 71.2 115 39.1
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.9e-09 68.2 67 38.8
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.1e-07 62.4 42 66.7


User provided reference genes

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