Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000586g0080 Nicotiana tabacum HOM05D004316 ORTHO05D005149 7.6e-192 673.7 348 100.0
Nitab4.5_0013624g0010 Nicotiana tabacum HOM05D004316 ORTHO05D005149 9.6e-171 603.6 353 90.7
PGSC0003DMG400027281 Solanum tuberosum HOM05D004316 ORTHO05D005149 2.7e-128 462.6 365 70.1
Peaxi162Scf00130g00012 Petunia axillaris HOM05D004316 ORTHO05D005149 2.7e-117 426.0 357 66.1
Sopen04g007890 Solanum pennellii HOM05D004316 ORTHO05D005149 6.1e-117 424.9 338 70.7
Migut.J01754 Erythranthe guttata HOM05D004316 ORTHO05D005149 2.8e-114 416.0 352 59.4
Oeu023579.1 Olea europaea HOM05D004316 ORTHO05D005149 2.9e-111 406.0 360 59.2
Oeu033010.1 Olea europaea HOM05D004316 ORTHO05D005149 1.8e-108 396.7 362 59.9
CSS0028183 Camellia sinensis var. sinensis HOM05D004316 ORTHO05D005149 4.9e-106 388.7 366 60.1
Nitab4.5_0000082g0160 Nicotiana tabacum HOM05D004316 ORTHO05D005149 4.1e-105 385.6 360 59.4
MSTRG.19858 Avicennia marina HOM05D004316 ORTHO05D005149 3.0e-103 379.4 358 56.7
SalBow6G3548 Salvia bowleyana HOM05D004316 ORTHO05D005149 1.9e-102 376.7 360 56.7
Dinv39612 Davidia involucrata HOM05D004316 ORTHO05D005149 5.6e-102 375.2 353 58.1
MSTRG.6426 Avicennia marina HOM05D004316 ORTHO05D005149 2.2e-98 363.2 365 54.2
COL.COLO4_28298 Corchorus olitorius HOM05D004316 ORTHO05D005149 1.4e-97 360.5 360 56.9
PGSC0003DMG400008166 Solanum tuberosum HOM05D004316 ORTHO05D005149 2.4e-97 359.8 336 59.2
Thecc.05G152800 Theobroma cacao HOM05D004316 ORTHO05D005149 9.2e-97 357.8 359 56.3
Dinv12489 Davidia involucrata HOM05D004316 ORTHO05D005149 1.2e-96 357.5 339 59.3
Duzib152G0001 Durio zibethinus HOM05D004316 ORTHO05D005149 3.9e-95 352.4 361 55.1
QL07p000671 Quercus lobata HOM05D004316 ORTHO05D005149 3.9e-95 352.4 365 52.9
TAR623G0492 Trochodendron aralioides HOM05D004316 ORTHO05D005149 3.9e-95 352.4 361 54.8
CiPaw.09G038700 Carya illinoinensis HOM05D004316 ORTHO05D005149 2.5e-94 349.7 363 52.6
Cfa016810 Carpinus fangiana HOM05D004316 ORTHO05D005149 3.3e-94 349.4 361 53.5
TAR633G0189 Trochodendron aralioides HOM05D004316 ORTHO05D005149 7.3e-94 348.2 367 52.9
Duzib128G1660 Durio zibethinus HOM05D004316 ORTHO05D005149 1.2e-93 347.4 361 55.1
Rhsim03G0025000 Rhododendron simsii HOM05D004316 ORTHO05D005149 2.8e-93 346.3 351 56.4
TWI74G1076 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 3.6e-93 345.9 353 53.0
DCAR_013604 Daucus carota HOM05D004316 ORTHO05D005149 8.1e-93 344.7 359 54.0
Haze_19850 Corylus avellana HOM05D004316 ORTHO05D005149 1.8e-92 343.6 362 52.8
Duzib093G1448 Durio zibethinus HOM05D004316 ORTHO05D005149 4.0e-92 342.4 361 54.3
Gohir.A01G131000 Gossypium hirsutum HOM05D004316 ORTHO05D005149 4.0e-92 342.4 360 53.3
CiPaw.10G033700 Carya illinoinensis HOM05D004316 ORTHO05D005149 1.2e-91 340.9 365 51.2
Cc06_g17600 Coffea canephora HOM05D004316 ORTHO05D005149 2.6e-91 339.7 295 61.0
SGA_v2.0_scaffold105G30405 Striga asiatica HOM05D004316 ORTHO05D005149 3.4e-91 339.3 364 51.6
Duzib106G1406 Durio zibethinus HOM05D004316 ORTHO05D005149 9.8e-91 337.8 353 53.5
Potri.006G050100 Populus trichocarpa HOM05D004316 ORTHO05D005149 9.8e-91 337.8 364 51.9
CAN.G676.33 Capsicum annuum HOM05D004316 ORTHO05D005149 2.2e-90 336.7 292 61.6
Lju124C42T7 Lonicera japonica HOM05D004316 ORTHO05D005149 2.2e-90 336.7 367 52.6
Gohir.D01G120400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.4e-89 334.0 361 52.4
SGA_v2.0_scaffold66G22353 Striga asiatica HOM05D004316 ORTHO05D005149 1.4e-89 334.0 367 51.2
Gorai.002G147000 Gossypium raimondii HOM05D004316 ORTHO05D005149 2.4e-89 333.2 361 52.4
Sabra06G0035000 Salix brachista HOM05D004316 ORTHO05D005149 9.2e-89 331.3 365 49.6
Lsat_1_v5_gn_5_161320 Lactuca sativa HOM05D004316 ORTHO05D005149 1.3e-87 327.4 361 50.1
TWI53G1538 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 2.3e-87 326.6 353 51.8
CsaV3_4G011650 Cucumis sativus L. HOM05D004316 ORTHO05D005149 2.5e-86 323.2 358 52.2
ClCG04G000170 Citrullus lanatus HOM05D004316 ORTHO05D005149 7.3e-86 321.6 359 52.9
MELO3C023147.2 Cucumis melo HOM05D004316 ORTHO05D005149 2.8e-85 319.7 359 51.8
Prupe.7G058900 Prunus persica HOM05D004316 ORTHO05D005149 3.6e-85 319.3 358 52.2
Nn2g15213 Nelumbo nucifera HOM05D004316 ORTHO05D005149 8.1e-85 318.2 379 50.9
Potri.016G056300 Populus trichocarpa HOM05D004316 ORTHO05D005149 1.4e-84 317.4 366 50.3
CANSAT80G0327 Cannabis sativa HOM05D004316 ORTHO05D005149 2.3e-84 316.6 359 50.7
Sabra16G0058800 Salix brachista HOM05D004316 ORTHO05D005149 2.3e-84 316.6 365 50.4
Glyma.02G184700 Glycine max HOM05D004316 ORTHO05D005149 6.8e-84 315.1 360 50.8
PGR004G2076 Punica granatum HOM05D004316 ORTHO05D005149 1.2e-83 314.3 364 48.6
Atru.chr1.1110 Acer truncatum HOM05D004316 ORTHO05D005149 2.6e-83 313.2 368 49.7
Lsat_1_v5_gn_9_29201 Lactuca sativa HOM05D004316 ORTHO05D005149 2.6e-83 313.2 365 48.5
Sed0026358 Sechium edule HOM05D004316 ORTHO05D005149 3.4e-83 312.8 358 51.4
Gorai.007G360600 Gossypium raimondii HOM05D004316 ORTHO05D005149 5.8e-83 312.0 359 49.9
Gohir.D11G329400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 7.6e-83 311.6 361 49.9
Gohir.A11G312700 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.3e-82 310.8 362 49.7
Lsat_1_v5_gn_8_81220 Lactuca sativa HOM05D004316 ORTHO05D005149 2.2e-82 310.1 372 47.0
Lj1g0001621 Lotus japonicus HOM05D004316 ORTHO05D005149 2.2e-82 310.1 355 48.7
Ciclev10004677m.g Citrus clementina HOM05D004316 ORTHO05D005149 3.7e-82 309.3 394 46.4
THA.LOC104802092 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 3.7e-82 309.3 359 48.7
FAN05G0825 Fragaria x ananassa HOM05D004316 ORTHO05D005149 1.1e-81 307.8 371 48.2
VMungo0720G0980 Vigna mungo HOM05D004316 ORTHO05D005149 1.9e-81 307.0 349 47.9
MD12G1074600 Malus domestica HOM05D004316 ORTHO05D005149 3.2e-81 306.2 366 47.5
Nn7g36300 Nelumbo nucifera HOM05D004316 ORTHO05D005149 3.2e-81 306.2 376 48.7
CARHR167600 Cardamine hirsuta HOM05D004316 ORTHO05D005149 4.1e-81 305.8 352 50.3
Glyma.19G138200 Glycine max HOM05D004316 ORTHO05D005149 4.1e-81 305.8 358 48.3
Aa31LG10G12240 Aethionema arabicum HOM05D004316 ORTHO05D005149 5.4e-81 305.4 356 48.3
RcHm_v2.0_Chr3g0482601 Rosa chinensis HOM05D004316 ORTHO05D005149 2.1e-80 303.5 363 48.2
AL5G38930 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 2.7e-80 303.1 360 50.0
arahy.Tifrunner.gnm1.ann1.WY7AF9 Arachis hypogaea HOM05D004316 ORTHO05D005149 6.0e-80 302.0 365 48.8
Thhalv10006507m.g Eutrema salsugineum HOM05D004316 ORTHO05D005149 1.0e-79 301.2 355 47.9
MD14G1072700 Malus domestica HOM05D004316 ORTHO05D005149 2.3e-79 300.1 362 47.2
Solyc10g079390.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 3.0e-79 299.7 286 55.6
BcaC02g09937 Brassica carinata HOM05D004316 ORTHO05D005149 5.1e-79 298.9 354 46.9
C04p35000 Brassica napus HOM05D004316 ORTHO05D005149 5.1e-79 298.9 354 46.9
BolC4t25057H Brassica oleracea HOM05D004316 ORTHO05D005149 5.1e-79 298.9 354 46.9
arahy.Tifrunner.gnm1.ann1.7DG8CI Arachis hypogaea HOM05D004316 ORTHO05D005149 8.6e-79 298.1 363 48.2
Manes.09G020900 Manihot esculenta HOM05D004316 ORTHO05D005149 1.5e-78 297.4 369 45.5
Psat3g072520 Pisum sativum HOM05D004316 ORTHO05D005149 3.3e-78 296.2 342 50.3
AT3G57400 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 4.3e-78 295.8 359 47.6
Glyma.03G136300 Glycine max HOM05D004316 ORTHO05D005149 7.3e-78 295.0 359 47.9
Lalb_Chr20g0110531 Lupinus albus HOM05D004316 ORTHO05D005149 9.6e-78 294.7 368 49.5
SGA_v2.0_scaffold5252G54614 Striga asiatica HOM05D004316 ORTHO05D005149 9.6e-78 294.7 303 52.5
FAN02G3785 Fragaria x ananassa HOM05D004316 ORTHO05D005149 1.6e-77 293.9 365 46.8
HanXRQChr10g0296681 Helianthus annuus HOM05D004316 ORTHO05D005149 3.6e-77 292.7 357 46.2
PSO384G0452 Papaver somniferum HOM05D004316 ORTHO05D005149 3.6e-77 292.7 372 44.9
A07p23380 Brassica napus HOM05D004316 ORTHO05D005149 4.7e-77 292.4 357 47.1
BraA07t30003Z Brassica rapa HOM05D004316 ORTHO05D005149 4.7e-77 292.4 354 47.2
THA.LOC104824440 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 3.1e-76 289.7 360 46.9
Lalb_Chr01g0017331 Lupinus albus HOM05D004316 ORTHO05D005149 5.2e-76 288.9 354 46.6
Medtr7g091450 Medicago truncatula HOM05D004316 ORTHO05D005149 1.2e-75 287.7 354 47.7
BcaB02g07608 Brassica carinata HOM05D004316 ORTHO05D005149 2.0e-75 287.0 359 46.8
PSO339G4967 Papaver somniferum HOM05D004316 ORTHO05D005149 2.6e-75 286.6 376 44.4
unitig_22.g6044 Utricularia gibba HOM05D004316 ORTHO05D005149 2.6e-75 286.6 354 44.1
ECA248G0930 Erigeron canadensis HOM05D004316 ORTHO05D005149 3.4e-75 286.2 391 43.7
BcaB02g08317 Brassica carinata HOM05D004316 ORTHO05D005149 5.8e-75 285.4 356 46.9
A04p03150 Brassica napus HOM05D004316 ORTHO05D005149 1.3e-74 284.3 356 46.6
Ca_08453_v3 Cicer arietinum L. HOM05D004316 ORTHO05D005149 2.2e-74 283.5 305 52.5
HanXRQChr13g0395921 Helianthus annuus HOM05D004316 ORTHO05D005149 8.4e-74 281.6 366 45.1
Sp5g05200 Schrenkiella parvula HOM05D004316 ORTHO05D005149 8.4e-74 281.6 359 46.0
Aqoxy1G00235 Aquilegia oxysepala HOM05D004316 ORTHO05D005149 1.9e-73 280.4 353 43.6
Lalb_Chr25g0287141 Lupinus albus HOM05D004316 ORTHO05D005149 1.9e-73 280.4 361 47.6
BolC8t50893H Brassica oleracea HOM05D004316 ORTHO05D005149 5.4e-73 278.9 351 46.4
C08p32820 Brassica napus HOM05D004316 ORTHO05D005149 7.1e-73 278.5 351 46.4
ECA247G0299 Erigeron canadensis HOM05D004316 ORTHO05D005149 9.3e-73 278.1 298 51.3
FAN09G3682 Fragaria x ananassa HOM05D004316 ORTHO05D005149 1.2e-72 277.7 318 50.0
Manes.08G051300 Manihot esculenta HOM05D004316 ORTHO05D005149 3.9e-71 272.7 364 46.7
Eucgr.A02343 Eucalyptus grandis HOM05D004316 ORTHO05D005149 6.6e-71 271.9 320 47.2
Cpa.g.sc33.204 Carica papaya HOM05D004316 ORTHO05D005149 1.9e-70 270.4 284 53.2
A09p50290 Brassica napus HOM05D004316 ORTHO05D005149 3.3e-70 269.6 350 45.7
BraA09t40480Z Brassica rapa HOM05D004316 ORTHO05D005149 3.3e-70 269.6 350 45.7
FvH4_6g23940 Fragaria vesca HOM05D004316 ORTHO05D005149 7.3e-70 268.5 320 48.4
Ah.13g076490 Amaranthus hybridus HOM05D004316 ORTHO05D005149 9.6e-70 268.1 369 44.7
FAN14G3684 Fragaria x ananassa HOM05D004316 ORTHO05D005149 2.1e-69 266.9 320 48.1
vmacro07846 Vaccinium macrocarpon HOM05D004316 ORTHO05D005149 1.4e-68 264.2 364 48.1
EL10Ac3g07095 Beta vulgaris HOM05D004316 ORTHO05D005149 1.8e-68 263.8 374 44.7
VMungo1383G1866 Vigna mungo HOM05D004316 ORTHO05D005149 3.4e-67 259.6 358 42.5
BcaC08g44838 Brassica carinata HOM05D004316 ORTHO05D005149 2.9e-66 256.5 291 48.8
C06p24450 Brassica napus HOM05D004316 ORTHO05D005149 2.9e-66 256.5 291 48.8
BolC6t37592H Brassica oleracea HOM05D004316 ORTHO05D005149 2.9e-66 256.5 291 48.8
AUR62026044 Chenopodium quinoa HOM05D004316 ORTHO05D005149 3.8e-66 256.1 376 43.1
BcaC07g40393 Brassica carinata HOM05D004316 ORTHO05D005149 8.4e-66 255.0 352 43.8
Actinidia39222 Actinidia chinensis HOM05D004316 ORTHO05D005149 1.1e-65 254.6 217 62.2
Carub.0005s2424 Capsella rubella HOM05D004316 ORTHO05D005149 4.2e-65 252.7 372 43.3
TPR.G3718 Trifolium pratense HOM05D004316 ORTHO05D005149 7.1e-65 251.9 334 44.9
Sc19g0006560 Simmondsia chinensis HOM05D004316 ORTHO05D005149 2.1e-64 250.4 368 41.3
AUR62024455 Chenopodium quinoa HOM05D004316 ORTHO05D005149 2.7e-64 250.0 377 41.9
Phvul.001G131600 Phaseolus vulgaris HOM05D004316 ORTHO05D005149 1.3e-61 241.1 323 43.7
AT5G52500 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 3.6e-61 239.6 297 46.8
unitig_8.g3507 Utricularia gibba HOM05D004316 ORTHO05D005149 1.1e-60 238.0 298 44.0
Solyc04g015850.3 Solanum lycopersicum HOM05D004316 ORTHO05D005149 3.1e-60 236.5 194 67.5
HanXRQChr05g0131861 Helianthus annuus HOM05D004316 ORTHO05D005149 1.2e-59 234.6 356 41.3
SEGI_13236 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 2.1e-48 197.2 440 33.2
SEGI_35991 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 2.1e-48 197.2 440 33.2
CDE08G1472 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 1.0e-47 194.9 281 40.2
CDE09G0122 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 3.3e-46 189.9 280 38.6
ATR0782G190 Amborella trichopoda HOM05D004316 ORTHO05D005149 1.1e-44 184.9 341 35.5
AL205U10010 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 1.6e-37 161.0 177 52.0
AL8G26960 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 2.8e-37 160.2 177 52.0
Pp3c8_14130 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.9e-34 150.2 431 27.8
Pp3c20_13470 Physcomitrium patens HOM05D004316 ORTHO05D005149 3.6e-32 143.3 336 29.5
Pp3c23_16170 Physcomitrium patens HOM05D004316 ORTHO05D005149 3.0e-31 140.2 415 25.8
Pp3c3_2450 Physcomitrium patens HOM05D004316 ORTHO05D005149 3.0e-31 140.2 290 34.5
Pp3c13_6400 Physcomitrium patens HOM05D004316 ORTHO05D005149 6.3e-29 132.5 213 39.4
AagrBONN_evm.TU.Sc2ySwM_362.2535 Anthoceros agrestis HOM05D004316 ORTHO05D005149 2.0e-27 127.5 493 24.7
Pp3c5_24720 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.0e-27 127.5 477 25.2
Mapoly0109s0039 Marchantia polymorpha HOM05D004316 ORTHO05D005149 1.0e-26 125.2 203 33.0
SMO201G0108 Selaginella moellendorffii HOM05D004316 ORTHO05D005149 1.4e-23 114.8 464 22.2
Pp3c6_3920 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.8e-21 107.1 214 30.8
Mapoly0052s0060 Marchantia polymorpha HOM05D004316 ORTHO05D005149 1.8e-20 104.4 252 26.6
GSVIVG01033262001 Vitis vinifera HOM05D004316 ORTHO05D005149 3.5e-19 100.1 122 45.9
SEGI_09580 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 3.6e-16 90.1 141 37.6
Actinidia39221 Actinidia chinensis HOM05D004316 ORTHO05D005149 5.7e-14 82.8 71 59.2
SEGI_40609 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 5.3e-12 76.3 77 45.5
BcaC02g09938 Brassica carinata HOM05D004316 ORTHO05D005149 1.3e-10 71.6 52 69.2
Solyc10g017860.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 1.7e-10 71.2 69 49.3
Nn1g05572 Nelumbo nucifera HOM05D004316 ORTHO05D022954 2.9e-10 70.5 85 47.1


User provided reference genes

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