Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 8.7e-82 307.0 163 100.0
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 9.1e-63 243.8 146 93.2
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 1.3e-53 213.4 140 85.0
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 5.0e-53 211.5 139 84.2
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 4.1e-47 191.8 139 78.4
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 6.5e-45 184.5 139 75.5
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.2e-30 137.1 139 55.4
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 1.5e-28 130.2 138 56.5
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.2e-27 127.1 134 55.2
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 4.7e-27 125.2 134 55.2
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 8.0e-27 124.4 140 54.3
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 1.4e-26 123.6 141 55.3
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 1.8e-26 123.2 127 58.3
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.7e-24 116.7 136 49.3
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.2e-24 116.3 131 51.9
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.2e-24 116.3 131 51.9
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 2.8e-24 115.9 139 52.5
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 2.8e-24 115.9 128 53.9
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.7e-24 115.5 128 53.1
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 4.9e-24 115.2 133 52.6
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 8.3e-24 114.4 134 49.3
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.1e-23 114.0 136 52.9
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 3.2e-23 112.5 133 51.1
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 5.4e-23 111.7 135 50.4
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 7.0e-23 111.3 112 56.2
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 7.0e-23 111.3 113 64.6
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 9.2e-23 110.9 147 49.7
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 9.2e-23 110.9 140 50.7
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 1.3e-21 107.1 142 48.6
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 1.3e-21 107.1 134 48.5
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 1.3e-21 107.1 142 47.9
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 2.3e-21 106.3 132 50.0
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 5.0e-21 105.1 134 48.5
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 8.6e-21 104.4 137 45.3
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 1.1e-20 104.0 125 44.8
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.5e-20 103.6 134 47.0
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.5e-20 103.6 131 48.9
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.9e-20 103.2 132 46.2
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.5e-20 102.8 137 46.7
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 4.3e-20 102.1 136 50.7
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 7.3e-20 101.3 134 48.5
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 7.3e-20 101.3 134 46.3
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 7.3e-20 101.3 108 56.5
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 2.1e-19 99.8 122 47.5
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 2.1e-19 99.8 136 47.1
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 2.1e-19 99.8 133 47.4
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 2.8e-19 99.4 133 48.9
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 2.8e-19 99.4 128 54.7
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 3.6e-19 99.0 133 45.9
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 4.7e-19 98.6 130 47.7
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 4.7e-19 98.6 125 51.2
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 1.0e-18 97.4 135 47.4
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 1.0e-18 97.4 138 47.1
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 2.3e-18 96.3 134 44.8
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 4.0e-18 95.5 144 43.1
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 4.0e-18 95.5 129 46.5
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 5.2e-18 95.1 136 44.9
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 6.8e-18 94.7 123 46.3
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 6.8e-18 94.7 133 47.4
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.0e-17 93.2 143 42.7
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 2.6e-17 92.8 141 44.7
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 2.6e-17 92.8 137 43.8
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 4.4e-17 92.0 114 46.5
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 4.4e-17 92.0 137 44.5
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 5.8e-17 91.7 132 43.9
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 9.8e-17 90.9 135 42.2
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 2.2e-16 89.7 88 54.5
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 3.7e-16 89.0 135 47.4
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 4.9e-16 88.6 139 46.0
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 8.3e-16 87.8 115 45.2
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 8.3e-16 87.8 128 41.4
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 5.4e-15 85.1 118 47.5
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 7.0e-15 84.7 106 50.0
Peaxi162Scf00008g02117 Petunia axillaris HOM05D000509 ORTHO05D006393 7.0e-15 84.7 59 71.2
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 9.2e-15 84.3 125 43.2
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.6e-14 83.6 137 40.1
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 3.5e-14 82.4 125 43.2
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 6.0e-14 81.6 132 43.2
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 1.7e-13 80.1 137 43.1
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 1.7e-13 80.1 134 43.3
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.1e-12 77.4 123 43.9
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 1.5e-12 77.0 130 42.3
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 4.3e-12 75.5 125 40.0
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.6e-12 75.1 140 40.7
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 5.6e-12 75.1 120 44.2
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 7.3e-12 74.7 147 40.8
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 9.5e-12 74.3 162 34.6
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 9.5e-12 74.3 112 46.4
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.2e-11 73.9 91 51.6
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 1.6e-11 73.6 127 39.4
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 2.8e-11 72.8 85 54.1
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.8e-11 72.8 137 40.9
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.8e-11 72.8 137 40.9
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 8.0e-11 71.2 103 41.7
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 8.0e-11 71.2 103 41.7
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.3e-10 69.7 135 37.8
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 3.1e-10 69.3 85 42.4
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 3.1e-10 69.3 85 42.4
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 4.0e-10 68.9 153 35.9
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 5.2e-10 68.6 145 36.6
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 5.2e-10 68.6 76 51.3
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 8.9e-10 67.8 103 40.8
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-09 67.4 124 43.5
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-09 67.4 124 43.5
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 1.2e-09 67.4 113 45.1
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 2.0e-09 66.6 104 45.2
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 3.4e-09 65.9 121 36.4
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 9.8e-09 64.3 68 52.9
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 1.3e-08 63.9 85 42.4
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 1.3e-08 63.9 87 50.6
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 1.7e-08 63.5 83 45.8
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 2.9e-08 62.8 135 37.8
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 6.4e-08 61.6 85 41.2
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.1e-07 60.8 141 35.5
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 1.4e-07 60.5 141 36.2
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 2.4e-07 59.7 85 40.0
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.1e-07 58.9 137 35.8
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 7.1e-07 58.2 118 35.6
ATR0680G086 Amborella trichopoda HOM05D000509 ORTHO05D006393 9.2e-07 57.8 110 38.2
Sc09g0004100 Simmondsia chinensis HOM05D000509 ORTHO05D006393 1.2e-06 57.4 98 35.7
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 2.7e-06 56.2 118 36.4
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 3.5e-06 55.8 102 39.2
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 3.5e-06 55.8 102 39.2
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 6.0e-06 55.1 121 34.7


User provided reference genes

Program Settings