Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 6.0e-143 510.8 248 100.0
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.8e-110 402.9 225 87.6
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 6.8e-62 241.5 211 64.9
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 1.9e-59 233.4 222 62.2
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 3.5e-58 229.2 225 62.2
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 4.6e-58 228.8 224 62.1
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 1.9e-48 196.8 197 58.4
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 8.1e-47 191.4 204 57.4
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.1e-46 191.0 205 55.1
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.5e-45 187.2 154 65.6
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.9e-44 182.2 175 54.3
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 1.4e-43 180.6 157 61.8
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 2.4e-43 179.9 172 60.5
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 3.2e-43 179.5 157 61.1
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 9.3e-43 177.9 177 53.1
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 9.3e-43 177.9 170 55.9
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 9.3e-43 177.9 146 61.0
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 9.3e-43 177.9 146 61.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 9.3e-43 177.9 113 77.0
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 3.5e-42 176.0 163 56.4
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 3.5e-42 176.0 146 58.9
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 6.0e-42 175.3 184 52.7
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 6.0e-42 175.3 184 52.7
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 6.0e-42 175.3 136 65.4
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 6.0e-42 175.3 133 65.4
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 1.0e-41 174.5 197 54.3
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 1.3e-41 174.1 189 50.8
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 2.3e-41 173.3 157 61.1
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 2.3e-41 173.3 136 64.0
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.3e-41 173.3 157 58.6
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.0e-41 172.9 145 62.1
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.9e-41 172.6 146 61.6
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 5.1e-41 172.2 145 61.4
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 5.1e-41 172.2 161 59.0
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 5.1e-41 172.2 152 64.5
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.1e-40 171.0 160 57.5
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 4.3e-40 169.1 151 57.6
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 5.6e-40 168.7 191 50.8
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 7.4e-40 168.3 146 56.8
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 9.6e-40 167.9 152 59.2
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 2.8e-39 166.4 169 55.6
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 2.8e-39 166.4 180 52.2
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.8e-39 166.4 100 75.0
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 4.8e-39 165.6 156 57.7
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 6.2e-39 165.2 104 72.1
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.1e-38 164.5 91 80.2
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.4e-38 164.1 152 57.2
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 1.8e-38 163.7 167 57.5
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 1.8e-38 163.7 110 68.2
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.8e-38 163.7 138 60.9
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 4.0e-38 162.5 141 61.0
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 9.0e-38 161.4 109 71.6
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.2e-37 161.0 98 74.5
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 1.2e-37 161.0 107 72.9
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.5e-37 160.6 138 59.4
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 1.5e-37 160.6 135 63.7
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.5e-37 160.6 92 78.3
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.5e-37 160.6 105 71.4
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 2.0e-37 160.2 142 59.2
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 3.4e-37 159.5 107 72.0
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 4.5e-37 159.1 111 69.4
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 5.8e-37 158.7 163 56.4
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 5.8e-37 158.7 163 56.4
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 7.6e-37 158.3 168 53.0
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.3e-36 157.5 130 63.1
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 2.2e-36 156.8 87 83.9
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 2.2e-36 156.8 157 57.3
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 3.8e-36 156.0 133 59.4
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 3.8e-36 156.0 168 51.8
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 3.8e-36 156.0 107 69.2
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 3.8e-36 156.0 107 66.4
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 3.8e-36 156.0 107 66.4
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 4.9e-36 155.6 182 51.6
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 8.4e-36 154.8 111 67.6
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.2e-34 151.0 90 75.6
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 2.7e-34 149.8 154 53.2
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 3.5e-34 149.4 114 64.0
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 6.0e-34 148.7 87 77.0
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.0e-33 147.9 181 50.8
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 1.0e-33 147.9 102 64.7
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 3.9e-33 146.0 136 55.1
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 6.7e-33 145.2 124 59.7
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.1e-32 144.4 91 72.5
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.9e-32 143.7 87 74.7
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 2.5e-32 143.3 143 56.6
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.3e-31 141.0 101 67.3
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.1e-31 140.2 87 72.4
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 2.8e-31 139.8 100 64.0
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.1e-30 137.9 95 68.4
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.4e-30 137.5 91 71.4
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.8e-30 137.1 85 74.1
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 1.8e-30 137.1 179 48.6
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 3.1e-30 136.3 87 71.3
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 3.1e-30 136.3 90 68.9
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 1.5e-29 134.0 97 66.0
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 5.8e-29 132.1 111 54.1
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 6.5e-28 128.6 100 64.0
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 2.5e-27 126.7 121 53.7
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.2e-26 124.4 160 51.2
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 4.6e-26 122.5 162 45.7
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 1.8e-25 120.6 82 70.7
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 1.8e-25 120.6 82 70.7
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 9.7e-24 114.8 103 54.4
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 9.7e-24 114.8 147 46.3
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.3e-23 114.4 74 70.3
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 4.8e-23 112.5 100 52.0
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.4e-22 110.9 89 56.2
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.4e-22 110.9 109 56.9
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 5.9e-21 105.5 87 55.2
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 5.0e-20 102.4 94 56.4
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.9e-19 100.5 90 51.1
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.0e-17 93.2 102 46.1
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.3e-15 87.8 175 38.3
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 4.5e-13 79.3 85 42.4
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.4e-11 74.3 88 51.1
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.4e-11 74.3 88 51.1
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 5.5e-11 72.4 40 82.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-07 61.2 50 64.0


User provided reference genes

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