Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.0e-45 186.4 96 100.0
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.7e-45 185.7 96 99.0
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 3.7e-40 167.9 106 83.0
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 3.7e-40 167.9 106 83.0
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 4.1e-39 164.5 106 81.1
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 7.0e-39 163.7 106 80.2
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 9.5e-36 153.3 106 72.6
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 4.7e-35 151.0 106 69.8
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 6.1e-35 150.6 105 70.5
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 6.1e-35 150.6 105 71.4
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 8.0e-35 150.2 106 70.8
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.0e-35 150.2 106 69.8
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 8.0e-35 150.2 106 71.7
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 1.0e-34 149.8 106 69.8
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.8e-34 149.1 106 68.9
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.3e-34 148.7 106 68.9
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 2.3e-34 148.7 106 70.8
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 2.3e-34 148.7 105 69.5
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.1e-34 148.3 106 68.9
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 6.8e-34 147.1 105 70.5
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 8.9e-34 146.7 105 69.5
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 1.2e-33 146.4 134 63.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 2.0e-33 145.6 105 68.6
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.0e-33 145.6 104 69.2
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 2.6e-33 145.2 105 67.6
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 2.6e-33 145.2 105 67.6
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 3.4e-33 144.8 105 67.6
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 3.4e-33 144.8 105 68.6
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 4.4e-33 144.4 106 67.9
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 4.4e-33 144.4 103 69.9
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 4.4e-33 144.4 105 67.6
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 5.8e-33 144.1 102 72.5
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.8e-33 144.1 102 71.6
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.8e-33 144.1 102 72.5
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 7.5e-33 143.7 105 68.6
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 7.5e-33 143.7 102 71.6
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 7.5e-33 143.7 105 68.6
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 9.8e-33 143.3 104 66.3
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 1.3e-32 142.9 105 65.7
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 1.3e-32 142.9 105 67.6
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.7e-32 142.5 105 65.7
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 2.2e-32 142.1 105 65.7
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 2.2e-32 142.1 102 71.6
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 2.9e-32 141.7 105 64.8
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 3.7e-32 141.4 105 66.7
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 4.9e-32 141.0 105 66.7
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 4.9e-32 141.0 105 65.7
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 4.9e-32 141.0 104 65.4
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 6.4e-32 140.6 103 67.0
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 8.3e-32 140.2 105 64.8
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 8.3e-32 140.2 102 69.6
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 8.3e-32 140.2 105 65.7
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 1.4e-31 139.4 105 64.8
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 1.9e-31 139.0 105 63.8
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 1.9e-31 139.0 105 62.9
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.9e-31 139.0 105 64.8
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 2.4e-31 138.7 105 63.8
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 3.2e-31 138.3 106 64.2
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 3.2e-31 138.3 106 64.2
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 3.2e-31 138.3 105 63.8
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 3.2e-31 138.3 105 65.7
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 4.1e-31 137.9 103 65.0
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 4.1e-31 137.9 105 64.8
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 5.4e-31 137.5 105 65.7
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 5.4e-31 137.5 105 65.7
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 7.0e-31 137.1 105 62.9
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 7.0e-31 137.1 105 62.9
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 7.0e-31 137.1 102 65.7
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 7.0e-31 137.1 105 63.8
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 1.6e-30 136.0 105 62.9
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.0e-30 135.6 105 65.7
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 4.6e-30 134.4 105 61.9
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 6.0e-30 134.0 105 61.0
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 6.0e-30 134.0 99 66.7
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 7.8e-30 133.7 105 64.8
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 1.3e-29 132.9 103 64.1
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 1.3e-29 132.9 103 64.1
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.3e-29 132.9 103 63.1
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 1.3e-29 132.9 105 61.9
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.3e-29 132.9 105 63.8
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.3e-29 132.9 105 65.7
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.3e-29 132.9 104 62.5
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 1.7e-29 132.5 103 63.1
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.7e-29 132.5 105 63.8
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.7e-29 132.5 105 63.8
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 1.7e-29 132.5 105 61.0
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 2.3e-29 132.1 105 60.0
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 3.9e-29 131.3 103 63.1
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 3.9e-29 131.3 105 61.9
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 5.0e-29 131.0 105 61.0
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 8.6e-29 130.2 105 62.9
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 8.6e-29 130.2 103 61.2
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 1.5e-28 129.4 103 61.2
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 1.5e-28 129.4 105 59.0
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 3.3e-28 128.3 106 62.3
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 5.6e-28 127.5 100 62.0
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 7.3e-28 127.1 102 61.8
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 9.5e-28 126.7 104 58.7
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.8e-26 122.5 104 57.7
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 4.0e-26 121.3 102 62.7
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 1.2e-25 119.8 105 55.2
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 2.6e-25 118.6 92 65.2
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 9.8e-25 116.7 102 58.8
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 4.9e-24 114.4 106 54.7
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 2.4e-23 112.1 134 47.8
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 2.4e-23 112.1 103 53.4
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 4.1e-23 111.3 88 64.8
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 4.1e-23 111.3 65 81.5
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 7.1e-23 110.5 96 56.2
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 2.7e-22 108.6 94 57.4
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 6.0e-22 107.5 73 69.9
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.3e-21 106.3 106 51.9
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 3.0e-21 105.1 65 76.9
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 3.9e-21 104.8 107 54.2
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 3.9e-21 104.8 65 76.9
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.1e-21 104.4 73 68.5
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 5.1e-21 104.4 93 53.8
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 2.5e-20 102.1 68 72.1
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.2e-19 99.8 75 65.3
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.6e-19 99.4 99 54.5
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.6e-19 99.4 95 54.7
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 2.1e-19 99.0 91 57.1
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 3.6e-19 98.2 65 72.3
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.1e-18 96.7 113 52.2
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 1.3e-16 89.7 83 50.6
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 4.9e-16 87.8 62 66.1
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 8.3e-16 87.0 70 57.1
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.4e-15 85.5 49 83.7
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 5.1e-13 77.8 66 57.6
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 1.1e-10 70.1 79 51.9
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 1.4e-07 59.7 68 50.0
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 5.4e-07 57.8 86 37.2
unitig_8.g4716 Utricularia gibba HOM05D000027 ORTHO05D002055 7.1e-07 57.4 88 40.9
Cre03.g183050 Chlamydomonas reinhardtii HOM05D005747 ORTHO05D007159 2.1e-06 55.8 99 29.3


User provided reference genes

Program Settings