Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 7.8e-109 397.1 199 100.0
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 1.7e-87 326.2 217 76.5
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 2.9e-87 325.5 230 73.0
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 2.9e-87 325.5 229 72.9
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 1.1e-86 323.6 229 72.1
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 9.3e-86 320.5 225 72.4
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 5.3e-81 304.7 229 66.8
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 7.6e-80 300.8 228 66.2
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 1.7e-79 299.7 226 68.1
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 2.9e-79 298.9 226 66.4
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 4.2e-78 295.0 223 65.5
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 9.3e-78 293.9 229 64.2
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 1.6e-77 293.1 221 67.0
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 7.9e-77 290.8 199 77.9
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 1.8e-76 289.7 223 65.0
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 3.0e-76 288.9 230 62.6
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 3.9e-76 288.5 221 65.2
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 2.5e-75 285.8 224 63.8
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 4.3e-75 285.0 223 62.3
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.6e-74 283.1 223 61.9
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.6e-74 283.1 223 61.9
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 1.6e-74 283.1 229 63.8
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 2.1e-74 282.7 221 64.3
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 3.7e-74 282.0 216 65.3
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 4.8e-74 281.6 223 62.8
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 6.3e-74 281.2 224 63.4
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 8.2e-74 280.8 224 63.4
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 3.1e-73 278.9 223 60.5
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 3.1e-73 278.9 218 64.7
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 4.1e-73 278.5 223 60.5
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 6.9e-73 277.7 218 62.8
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 2.0e-72 276.2 223 60.1
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 2.6e-72 275.8 223 60.5
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 1.0e-71 273.9 220 60.9
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 2.2e-71 272.7 220 62.3
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 8.5e-71 270.8 220 60.9
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 1.4e-70 270.0 226 61.5
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 1.4e-70 270.0 232 60.3
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 2.5e-70 269.2 226 60.6
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 2.5e-70 269.2 223 61.4
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 3.2e-70 268.9 220 60.5
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 3.2e-70 268.9 222 61.7
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 5.5e-70 268.1 220 60.9
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 5.5e-70 268.1 225 59.1
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 5.5e-70 268.1 231 59.7
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 7.2e-70 267.7 226 60.2
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 1.6e-69 266.5 220 60.0
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 1.6e-69 266.5 224 61.6
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 1.6e-69 266.5 221 61.1
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 1.6e-69 266.5 221 58.8
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 2.1e-69 266.2 221 58.8
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 2.7e-69 265.8 224 59.8
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 4.6e-69 265.0 220 58.2
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 6.1e-69 264.6 220 58.2
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 7.9e-69 264.2 221 60.2
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.8e-68 263.1 252 57.1
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 3.0e-68 262.3 228 57.9
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 3.0e-68 262.3 221 60.2
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 3.9e-68 261.9 228 57.9
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 1.1e-67 260.4 221 59.7
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.9e-67 259.6 161 77.6
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.9e-67 259.6 161 77.6
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 1.9e-67 259.6 219 58.4
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 2.5e-67 259.2 227 57.7
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 4.3e-67 258.5 228 56.6
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 4.3e-67 258.5 224 56.7
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 9.7e-67 257.3 224 56.2
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 1.3e-66 256.9 223 57.8
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 1.3e-66 256.9 224 56.7
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 1.6e-66 256.5 226 57.5
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 2.2e-66 256.1 221 56.6
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 3.7e-66 255.4 223 58.7
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 4.8e-66 255.0 225 56.9
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 4.8e-66 255.0 219 58.4
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 6.3e-66 254.6 204 62.7
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 2.4e-65 252.7 225 56.0
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 4.1e-65 251.9 217 56.2
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 1.5e-64 250.0 225 54.2
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 4.5e-64 248.4 220 59.1
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 1.0e-63 247.3 161 72.7
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 1.0e-63 247.3 227 55.5
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 2.9e-63 245.7 200 64.0
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 5.0e-63 245.0 219 54.8
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 8.5e-63 244.2 219 53.9
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 1.1e-62 243.8 219 54.3
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 1.4e-62 243.4 251 51.8
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 2.5e-62 242.7 226 54.9
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 3.2e-62 242.3 219 54.3
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 4.2e-62 241.9 161 70.8
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 4.2e-62 241.9 218 54.1
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 7.2e-62 241.1 251 51.0
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 9.4e-62 240.7 220 55.5
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 1.2e-61 240.4 223 53.4
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 2.1e-61 239.6 282 47.5
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 3.6e-61 238.8 161 70.8
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 6.1e-61 238.0 160 66.9
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 1.0e-60 237.3 206 58.7
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 1.0e-60 237.3 162 65.4
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 2.3e-60 236.1 232 56.5
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 3.0e-60 235.7 217 52.5
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 3.0e-60 235.7 217 52.5
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 5.1e-60 235.0 220 51.8
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 2.0e-59 233.0 219 56.2
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 2.6e-59 232.6 217 52.1
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 2.6e-59 232.6 217 52.1
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 7.4e-59 231.1 194 63.4
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 2.2e-58 229.6 160 66.9
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 2.2e-58 229.6 217 50.7
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 6.3e-58 228.0 217 51.6
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 2.4e-57 226.1 187 61.0
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 4.1e-57 225.3 219 50.2
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 5.3e-57 224.9 219 50.7
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 5.3e-57 224.9 219 49.3
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 1.5e-56 223.4 217 56.2
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 2.6e-56 222.6 219 51.1
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 3.4e-56 222.2 218 52.3
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 5.9e-56 221.5 218 51.4
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 7.7e-56 221.1 220 50.0
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 7.7e-56 221.1 220 50.0
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.3e-55 220.3 162 64.8
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 2.2e-55 219.5 220 49.5
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 2.2e-55 219.5 220 49.5
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 2.2e-55 219.5 220 49.5
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 1.9e-54 216.5 218 50.5
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 1.9e-54 216.5 215 51.2
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 3.2e-54 215.7 217 47.9
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 2.7e-53 212.6 217 47.0
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 3.0e-52 209.1 222 46.4
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 3.0e-52 209.1 222 46.4
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 5.7e-51 204.9 177 54.8
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 9.7e-51 204.1 194 53.1
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 9.7e-51 204.1 162 61.1
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 2.8e-50 202.6 156 58.3
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 1.1e-49 200.7 165 59.4
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 1.1e-49 200.7 221 48.9
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 1.2e-45 187.2 211 45.0
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 2.1e-45 186.4 162 50.6
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 1.0e-44 184.1 155 62.6
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 2.6e-43 179.5 218 43.6
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 3.3e-43 179.1 150 60.7
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 2.9e-39 166.0 120 60.0
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 6.5e-39 164.9 120 62.5
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 1.5e-38 163.7 215 39.5
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 7.2e-38 161.4 205 41.5
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 7.7e-32 141.4 148 47.3
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 2.9e-31 139.4 157 43.3
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 4.0e-28 129.0 86 72.1
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 9.8e-27 124.4 146 41.1
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.8e-25 120.2 91 63.7
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 5.4e-25 118.6 75 76.0
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 3.6e-21 105.9 122 48.4
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 3.6e-21 105.9 122 48.4
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 2.0e-19 100.1 101 50.5
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 8.3e-18 94.7 76 59.2
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 3.6e-13 79.3 47 76.6
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 8.0e-13 78.2 89 49.4
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 1.8e-12 77.0 204 24.5
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 8.9e-12 74.7 69 49.3
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 2.0e-11 73.6 89 48.3
HanXRQChr09g0269551 Helianthus annuus HOM05D004555 ORTHO05D005305 6.0e-08 62.0 50 62.0


User provided reference genes

Program Settings