Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.6e-93 346.3 169 100.0
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.5e-41 171.8 88 93.2
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.8e-39 166.8 84 96.4
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 8.8e-39 164.5 84 94.0
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 2.6e-38 162.9 84 92.9
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.3e-38 162.5 84 92.9
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 9.7e-38 161.0 84 90.5
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 9.7e-38 161.0 85 90.6
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 1.3e-37 160.6 84 91.7
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 8.2e-37 157.9 94 79.8
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 1.8e-36 156.8 84 85.7
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 3.1e-36 156.0 84 85.7
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 4.1e-36 155.6 83 85.5
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 5.3e-36 155.2 89 79.8
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 7.0e-36 154.8 85 83.5
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 9.1e-36 154.5 84 84.5
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 9.1e-36 154.5 84 83.3
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 1.2e-35 154.1 84 84.5
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.2e-35 154.1 84 84.5
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 1.6e-35 153.7 82 89.0
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.6e-35 153.7 84 82.1
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 2.0e-35 153.3 85 81.2
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 2.6e-35 152.9 84 83.3
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 2.6e-35 152.9 84 84.5
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 7.7e-35 151.4 84 82.1
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 7.7e-35 151.4 84 82.1
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 7.7e-35 151.4 84 81.0
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 7.7e-35 151.4 84 83.3
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 7.7e-35 151.4 84 81.0
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 1.0e-34 151.0 84 82.1
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 1.3e-34 150.6 85 81.2
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 1.3e-34 150.6 84 85.7
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 1.7e-34 150.2 84 81.0
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.7e-34 150.2 84 82.1
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 1.7e-34 150.2 84 81.0
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.2e-34 149.8 84 81.0
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 2.9e-34 149.4 84 81.0
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 2.9e-34 149.4 84 82.1
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 3.8e-34 149.1 84 82.1
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 3.8e-34 149.1 84 81.0
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 6.5e-34 148.3 84 79.8
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 6.5e-34 148.3 84 81.0
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 6.5e-34 148.3 84 79.8
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 6.5e-34 148.3 84 79.8
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 8.5e-34 147.9 84 81.0
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 8.5e-34 147.9 84 81.0
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 8.5e-34 147.9 83 81.9
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 1.1e-33 147.5 84 78.6
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.1e-33 147.5 84 78.6
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.1e-33 147.5 84 78.6
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.1e-33 147.5 83 81.9
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 1.5e-33 147.1 84 78.6
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 1.5e-33 147.1 84 78.6
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 1.5e-33 147.1 84 81.0
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 1.5e-33 147.1 79 84.8
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 1.9e-33 146.7 83 80.7
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 1.9e-33 146.7 85 78.8
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 2.5e-33 146.4 84 79.8
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 2.5e-33 146.4 84 78.6
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 3.2e-33 146.0 84 77.4
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 3.2e-33 146.0 84 77.4
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 3.2e-33 146.0 84 81.0
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 3.2e-33 146.0 84 81.0
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 3.2e-33 146.0 84 78.6
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 4.2e-33 145.6 84 78.6
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 4.2e-33 145.6 84 78.6
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 4.2e-33 145.6 85 78.8
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 5.5e-33 145.2 84 81.0
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 5.5e-33 145.2 84 79.8
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 7.2e-33 144.8 84 77.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 7.2e-33 144.8 84 78.6
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 9.4e-33 144.4 84 77.4
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 1.2e-32 144.1 83 79.5
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 2.1e-32 143.3 85 78.8
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 2.7e-32 142.9 84 76.2
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 3.6e-32 142.5 85 78.8
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 3.6e-32 142.5 84 75.0
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 6.1e-32 141.7 84 78.6
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 6.1e-32 141.7 84 76.2
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 6.1e-32 141.7 84 76.2
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 6.1e-32 141.7 83 79.5
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 1.0e-31 141.0 85 77.6
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 1.0e-31 141.0 85 77.6
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 1.4e-31 140.6 84 77.4
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.8e-31 140.2 76 82.9
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 2.3e-31 139.8 84 73.8
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 3.0e-31 139.4 78 80.8
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 5.2e-31 138.7 84 75.0
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 6.7e-31 138.3 84 76.2
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 8.8e-31 137.9 75 85.3
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 8.8e-31 137.9 85 75.3
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.2e-30 137.5 84 77.4
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 2.6e-30 136.3 114 64.0
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 5.7e-30 135.2 84 75.0
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 7.5e-30 134.8 85 72.9
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 9.7e-30 134.4 83 78.3
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 9.7e-30 134.4 85 72.9
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 2.2e-29 133.3 74 83.8
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 3.7e-29 132.5 84 72.6
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 9.1e-28 127.9 76 73.7
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 1.2e-27 127.5 83 72.3
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 2.0e-27 126.7 84 66.7
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 3.8e-26 122.5 90 66.7
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 6.5e-26 121.7 84 67.9
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.1e-25 120.9 91 69.2
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.5e-25 120.6 84 65.5
Nitab4.5_0011078g0030 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.6e-22 109.8 121 51.2
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 4.4e-22 109.0 74 68.9
Nitab4.5_0011078g0020 Nicotiana tabacum HOM05D006436 ORTHO05D008011 9.8e-22 107.8 58 89.7
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 4.1e-20 102.4 84 67.9
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.5e-17 93.2 48 95.8
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 5.5e-17 92.0 48 83.3
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 7.2e-17 91.7 65 66.2
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 3.6e-16 89.4 48 81.2
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.4e-12 76.6 86 45.3
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 8.6e-10 68.2 33 84.8
CAN.G935.5 Capsicum annuum HOM05D006436 ORTHO05D008011 1.5e-09 67.4 37 83.8
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.3e-07 60.1 123 33.3
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 3.0e-07 59.7 36 69.4


User provided reference genes

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