Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000568g0280 Nicotiana tabacum HOM05D005274 ORTHO05D006485 1.2e-135 486.5 242 100.0
Peaxi162Scf00102g01534 Petunia axillaris HOM05D005274 ORTHO05D006485 1.3e-73 280.4 276 60.5
Nitab4.5_0006090g0030 Nicotiana tabacum HOM05D005274 ORTHO05D006485 3.8e-73 278.9 277 59.9
Nitab4.5_0004836g0020 Nicotiana tabacum HOM05D005274 ORTHO05D006485 1.4e-72 276.9 275 60.0
CAN.G792.79 Capsicum annuum HOM05D005274 ORTHO05D006485 1.8e-70 270.0 272 59.6
PGSC0003DMG400005779 Solanum tuberosum HOM05D005274 ORTHO05D006485 3.7e-68 262.3 276 58.0
Sopen08g003920 Solanum pennellii HOM05D005274 ORTHO05D006485 5.5e-64 248.4 272 55.9
Solyc08g008040.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 1.6e-63 246.9 274 55.8
PGSC0003DMG400011003 Solanum tuberosum HOM05D005274 ORTHO05D006485 5.1e-62 241.9 274 55.8
SGA_v2.0_scaffold32G13165 Striga asiatica HOM05D005274 ORTHO05D006485 3.4e-58 229.2 272 51.1
Oeu034171.3 Olea europaea HOM05D005274 ORTHO05D006485 7.2e-56 221.5 274 48.5
Dinv33272 Davidia involucrata HOM05D005274 ORTHO05D006485 1.0e-54 217.6 276 47.1
Migut.B00249 Erythranthe guttata HOM05D005274 ORTHO05D006485 1.0e-54 217.6 276 48.2
CSS0033174 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 1.8e-54 216.9 272 47.4
Cc00_g24660 Coffea canephora HOM05D005274 ORTHO05D006485 1.8e-54 216.9 276 47.5
Cc06_g13990 Coffea canephora HOM05D005274 ORTHO05D006485 3.9e-54 215.7 276 47.8
Lsat_1_v5_gn_2_86720 Lactuca sativa HOM05D005274 ORTHO05D006485 1.5e-53 213.8 274 47.1
MSTRG.20092 Avicennia marina HOM05D005274 ORTHO05D006485 1.3e-52 210.7 274 47.4
Oeu020806.2 Olea europaea HOM05D005274 ORTHO05D006485 1.1e-51 207.6 274 45.6
SalBow6G5022 Salvia bowleyana HOM05D005274 ORTHO05D006485 2.4e-51 206.5 264 46.2
Lj9A368G50 Lonicera japonica HOM05D005274 ORTHO05D006485 5.3e-51 205.3 275 46.5
SalBow6G6215 Salvia bowleyana HOM05D005274 ORTHO05D006485 5.3e-51 205.3 264 45.8
TAR381G1230 Trochodendron aralioides HOM05D005274 ORTHO05D006485 5.9e-50 201.8 276 46.4
HanXRQChr07g0200241 Helianthus annuus HOM05D005274 ORTHO05D006485 2.2e-49 199.9 275 45.8
TAR624G0372 Trochodendron aralioides HOM05D005274 ORTHO05D006485 2.2e-49 199.9 278 45.7
Cpa.g.sc70.54 Carica papaya HOM05D005274 ORTHO05D006485 2.9e-49 199.5 277 46.6
ECA238G2078 Erigeron canadensis HOM05D005274 ORTHO05D006485 1.4e-48 197.2 274 44.2
vmacro18391 Vaccinium macrocarpon HOM05D005274 ORTHO05D006485 7.2e-48 194.9 275 45.1
Nn8g40353 Nelumbo nucifera HOM05D005274 ORTHO05D006485 1.2e-47 194.1 241 46.5
Hma1.2p1_0474F.1_g160740 Hydrangea macrophylla HOM05D005274 ORTHO05D006485 2.7e-47 193.0 262 44.7
Rhsim08G0038500 Rhododendron simsii HOM05D005274 ORTHO05D006485 4.6e-47 192.2 277 46.2
QL02p069234 Quercus lobata HOM05D005274 ORTHO05D006485 6.1e-47 191.8 277 44.4
unitig_744.g24245 Utricularia gibba HOM05D005274 ORTHO05D006485 7.9e-47 191.4 231 48.1
GSVIVG01032972001 Vitis vinifera HOM05D005274 ORTHO05D006485 1.0e-46 191.0 278 44.2
Cfa007146 Carpinus fangiana HOM05D005274 ORTHO05D006485 1.4e-46 190.7 275 44.4
VMungo1309G1271 Vigna mungo HOM05D005274 ORTHO05D006485 1.4e-46 190.7 278 42.4
Manes.11G112500 Manihot esculenta HOM05D005274 ORTHO05D006485 2.3e-46 189.9 270 44.8
Potri.004G197200 Populus trichocarpa HOM05D005274 ORTHO05D006485 3.9e-46 189.1 275 42.9
Sabra04G0133600 Salix brachista HOM05D005274 ORTHO05D006485 1.1e-45 187.6 275 43.3
Eucgr.I01592 Eucalyptus grandis HOM05D005274 ORTHO05D006485 2.0e-45 186.8 277 43.3
Medtr2g097630 Medicago truncatula HOM05D005274 ORTHO05D006485 4.3e-45 185.7 280 41.8
CiPaw.04G000800 Carya illinoinensis HOM05D005274 ORTHO05D006485 9.7e-45 184.5 279 42.7
FAN24G2993 Fragaria x ananassa HOM05D005274 ORTHO05D006485 1.3e-44 184.1 277 43.3
Glyma.02G271800 Glycine max HOM05D005274 ORTHO05D006485 1.3e-44 184.1 280 40.4
Glyma.14G044800 Glycine max HOM05D005274 ORTHO05D006485 3.7e-44 182.6 280 39.6
Sopen10g034190 Solanum pennellii HOM05D005274 ORTHO05D006485 3.7e-44 182.6 249 48.6
FAN27G1266 Fragaria x ananassa HOM05D005274 ORTHO05D006485 6.3e-44 181.8 277 43.3
FAN15G2064 Fragaria x ananassa HOM05D005274 ORTHO05D006485 8.2e-44 181.4 277 43.0
FvH4_2g10500 Fragaria vesca HOM05D005274 ORTHO05D006485 1.1e-43 181.0 277 43.0
DCAR_022112 Daucus carota HOM05D005274 ORTHO05D006485 1.8e-43 180.3 271 41.3
Medtr5g071380 Medicago truncatula HOM05D005274 ORTHO05D006485 2.4e-43 179.9 280 40.4
RcHm_v2.0_Chr6g0267991 Rosa chinensis HOM05D005274 ORTHO05D006485 3.1e-43 179.5 277 41.5
Gohir.D11G068400 Gossypium hirsutum HOM05D005274 ORTHO05D006485 6.9e-43 178.3 279 43.0
Psat2g056880 Pisum sativum HOM05D005274 ORTHO05D006485 6.9e-43 178.3 280 39.6
THA.LOC104802536 Tarenaya hassleriana HOM05D005274 ORTHO05D006485 9.1e-43 177.9 277 40.4
Atru.chr6.2707 Acer truncatum HOM05D005274 ORTHO05D006485 1.5e-42 177.2 277 41.5
ClCG01G008500 Citrullus lanatus HOM05D005274 ORTHO05D006485 1.5e-42 177.2 272 39.7
Duzib187G0989 Durio zibethinus HOM05D005274 ORTHO05D006485 2.0e-42 176.8 273 41.8
Gorai.007G073200 Gossypium raimondii HOM05D005274 ORTHO05D006485 2.0e-42 176.8 279 43.0
Ca_26258_v3 Cicer arietinum L. HOM05D005274 ORTHO05D006485 2.6e-42 176.4 280 40.0
Sed0000255 Sechium edule HOM05D005274 ORTHO05D006485 2.6e-42 176.4 275 40.0
Thecc.04G049000 Theobroma cacao HOM05D005274 ORTHO05D006485 3.4e-42 176.0 278 42.8
Prupe.5G024800 Prunus persica HOM05D005274 ORTHO05D006485 4.5e-42 175.6 283 42.4
CsaV3_5G024970 Cucumis sativus L. HOM05D005274 ORTHO05D006485 7.7e-42 174.9 272 39.7
TPR.G27812 Trifolium pratense HOM05D005274 ORTHO05D006485 7.7e-42 174.9 280 40.0
arahy.Tifrunner.gnm1.ann1.T7P6Q4 Arachis hypogaea HOM05D005274 ORTHO05D006485 1.0e-41 174.5 276 40.2
LjContig00564g0024425 Lotus japonicus HOM05D005274 ORTHO05D006485 1.3e-41 174.1 273 37.7
MD09G1264600 Malus domestica HOM05D005274 ORTHO05D006485 1.3e-41 174.1 280 40.0
Gohir.A11G064100 Gossypium hirsutum HOM05D005274 ORTHO05D006485 1.7e-41 173.7 275 42.5
AUR62037816 Chenopodium quinoa HOM05D005274 ORTHO05D006485 2.2e-41 173.3 249 42.6
arahy.Tifrunner.gnm1.ann1.5GP605 Arachis hypogaea HOM05D005274 ORTHO05D006485 2.9e-41 172.9 276 39.9
Ciclev10016162m.g Citrus clementina HOM05D005274 ORTHO05D006485 8.5e-41 171.4 278 41.7
EL10Ac6g13414 Beta vulgaris HOM05D005274 ORTHO05D006485 1.9e-40 170.2 271 40.6
Lalb_Chr10g0096401 Lupinus albus HOM05D005274 ORTHO05D006485 2.5e-40 169.9 276 38.8
PGR142G3427 Punica granatum HOM05D005274 ORTHO05D006485 2.5e-40 169.9 273 38.8
SHI31386 Sapria himalayana HOM05D005274 ORTHO05D006485 2.5e-40 169.9 266 40.2
MELO3C005096.2 Cucumis melo HOM05D005274 ORTHO05D006485 3.2e-40 169.5 272 39.7
Ah.10g032810 Amaranthus hybridus HOM05D005274 ORTHO05D006485 1.6e-39 167.2 244 42.2
Sc14g0002660 Simmondsia chinensis HOM05D005274 ORTHO05D006485 3.6e-39 166.0 274 39.8
AUR62017870 Chenopodium quinoa HOM05D005274 ORTHO05D006485 4.7e-39 165.6 277 39.7
AUR62009346 Chenopodium quinoa HOM05D005274 ORTHO05D006485 7.9e-39 164.9 281 40.2
Phvul.005G158400 Phaseolus vulgaris HOM05D005274 ORTHO05D006485 1.8e-38 163.7 279 37.6
SHI33526 Sapria himalayana HOM05D005274 ORTHO05D006485 1.8e-38 163.7 266 40.6
PSO063G1622 Papaver somniferum HOM05D005274 ORTHO05D006485 2.0e-37 160.2 237 40.1
CARHR128660 Cardamine hirsuta HOM05D005274 ORTHO05D006485 2.6e-37 159.8 268 36.9
C03p22390 Brassica napus HOM05D005274 ORTHO05D006485 4.4e-37 159.1 268 36.6
Hund29750 Selenicereus undatus HOM05D005274 ORTHO05D006485 4.4e-37 159.1 235 42.6
Hund29752 Selenicereus undatus HOM05D005274 ORTHO05D006485 4.4e-37 159.1 235 42.6
BcaC01g05789 Brassica carinata HOM05D005274 ORTHO05D006485 7.4e-37 158.3 268 36.2
BolC3t14622H Brassica oleracea HOM05D005274 ORTHO05D006485 7.4e-37 158.3 268 36.2
A03p19190 Brassica napus HOM05D005274 ORTHO05D006485 1.7e-36 157.1 268 36.6
BraA03t11174Z Brassica rapa HOM05D005274 ORTHO05D006485 1.7e-36 157.1 268 36.6
PSO017G0788 Papaver somniferum HOM05D005274 ORTHO05D006485 2.2e-36 156.8 238 40.3
Sp4g16830 Schrenkiella parvula HOM05D005274 ORTHO05D006485 2.2e-36 156.8 268 36.9
AL4G30540 Arabidopsis lyrata HOM05D005274 ORTHO05D006485 2.8e-36 156.4 268 36.6
AT2G34570 Arabidopsis thaliana HOM05D005274 ORTHO05D006485 3.7e-36 156.0 268 35.8
Carub.0004s1624 Capsella rubella HOM05D005274 ORTHO05D006485 4.8e-36 155.6 269 36.4
Thhalv10017887m.g Eutrema salsugineum HOM05D005274 ORTHO05D006485 1.8e-35 153.7 268 36.2
Aa31LG10G6820 Aethionema arabicum HOM05D005274 ORTHO05D006485 7.0e-35 151.8 300 33.3
MD16G1246600 Malus domestica HOM05D005274 ORTHO05D006485 7.0e-35 151.8 224 41.5
MD08G1181300 Malus domestica HOM05D005274 ORTHO05D006485 9.1e-35 151.4 280 36.1
BcaB01g06368 Brassica carinata HOM05D005274 ORTHO05D006485 2.0e-34 150.2 268 35.4
ATR1136G175 Amborella trichopoda HOM05D005274 ORTHO05D006485 7.7e-34 148.3 269 36.4
CANSAT54G1155 Cannabis sativa HOM05D005274 ORTHO05D006485 7.7e-34 148.3 272 36.0
Aqoxy5G02491 Aquilegia oxysepala HOM05D005274 ORTHO05D006485 1.3e-33 147.5 274 37.6
TWI32G1102 Tripterygium wilfordii HOM05D005274 ORTHO05D006485 3.8e-33 146.0 309 34.0
Cc00_g27920 Coffea canephora HOM05D005274 ORTHO05D006485 4.7e-31 139.0 155 48.4
Solyc10g084740.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 4.0e-30 136.0 313 36.7
Potri.009G159400 Populus trichocarpa HOM05D005274 ORTHO05D006485 2.6e-29 133.3 210 38.1
Zm00001eb319780 Zea mays HOM05D005274 ORTHO05D006485 4.8e-28 129.0 275 34.5
Os02g0468200 Oryza sativa ssp. japonica HOM05D005274 ORTHO05D006485 3.1e-27 126.3 245 35.1
COL.COLO4_13388 Corchorus olitorius HOM05D005274 ORTHO05D006485 9.1e-27 124.8 251 37.5
HPP92_002470 Vanilla planifolia HOM05D005274 ORTHO05D006485 9.1e-27 124.8 128 48.4
BcaC02g11519 Brassica carinata HOM05D005274 ORTHO05D006485 6.5e-25 118.6 124 48.4
BolC4t23029H Brassica oleracea HOM05D005274 ORTHO05D006485 6.5e-25 118.6 124 48.4
Sabra10G0082800 Salix brachista HOM05D005274 ORTHO05D006485 6.1e-23 112.1 76 63.2
C04p14460 Brassica napus HOM05D005274 ORTHO05D006485 2.3e-22 110.2 109 49.5
Sabra02G0148900 Salix brachista HOM05D005274 ORTHO05D006485 4.0e-22 109.4 76 61.8
SEGI_17090 Sequoiadendron giganteum HOM05D005274 ORTHO05D006485 6.8e-22 108.6 128 46.1
Pp3c2_27880 Physcomitrium patens HOM05D005274 ORTHO05D006485 1.2e-21 107.8 278 28.8
AagrBONN_evm.TU.Sc2ySwM_228.2974 Anthoceros agrestis HOM05D005274 ORTHO05D006485 2.0e-21 107.1 272 28.7
Mapoly0006s0036 Marchantia polymorpha HOM05D005274 ORTHO05D006485 5.7e-21 105.5 227 33.0
Cc00_g29040 Coffea canephora HOM05D005274 ORTHO05D006485 8.3e-20 101.7 65 72.3
CSS0005176 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 1.7e-17 94.0 103 52.4
SMO347G0017 Selaginella moellendorffii HOM05D005274 ORTHO05D006485 3.2e-16 89.7 236 30.1
Actinidia19548 Actinidia chinensis HOM05D005274 ORTHO05D006485 2.7e-15 86.7 151 39.1
CBR_g8346 Chara braunii HOM05D005274 ORTHO05D006485 1.4e-14 84.3 225 29.3
Phvul.005G025400 Phaseolus vulgaris HOM05D005274 ORTHO05D006485 3.0e-14 83.2 105 47.6
Nn8g41301 Nelumbo nucifera HOM05D005274 ORTHO05D006485 3.4e-13 79.7 105 45.7
PGR142G3154 Punica granatum HOM05D005274 ORTHO05D006485 1.3e-12 77.8 136 40.4
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 6.3e-12 75.5 52 65.4
MCO15G315 Micromonas commoda HOM05D005274 ORTHO05D006485 5.9e-10 68.9 129 31.0
CDE04G1865 Ceratophyllum demersum HOM05D000386 ORTHO05D000406 7.7e-10 68.6 65 49.2
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 1.2e-07 61.2 43 58.1
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 3.6e-07 59.7 38 63.2
Sabra07G0113400 Salix brachista HOM05D005274 ORTHO05D006485 1.8e-06 57.4 38 60.5
SEGI_09940 Sequoiadendron giganteum HOM05D005274 ORTHO05D006485 2.3e-06 57.0 110 33.6
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 8.9e-06 55.1 43 53.5


User provided reference genes

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