Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 9.0e-237 823.2 405 100.0
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.6e-217 759.2 410 91.2
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 4.6e-209 731.1 407 88.0
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 2.4e-205 718.8 407 86.5
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 6.9e-205 717.2 405 86.2
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 2.6e-199 698.7 409 84.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.4e-181 639.8 405 79.5
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.6e-164 583.2 411 69.3
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 3.0e-163 578.9 403 71.5
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.8e-160 569.7 374 74.3
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 6.6e-155 551.2 364 71.7
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 8.6e-155 550.8 382 69.1
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.5e-154 550.1 378 72.2
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 4.3e-154 548.5 358 72.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 6.2e-153 544.7 409 64.8
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.1e-152 543.9 404 66.6
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 1.4e-152 543.5 367 70.3
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 3.1e-152 542.3 380 69.5
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 4.0e-152 542.0 367 70.0
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 5.8e-151 538.1 397 66.2
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.3e-150 537.0 404 66.3
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 3.7e-150 535.4 366 70.2
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 8.3e-150 534.3 355 68.7
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.9e-149 533.1 383 67.1
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 7.1e-149 531.2 353 71.4
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.6e-148 530.0 370 69.2
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.5e-148 528.9 382 66.5
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.5e-148 528.9 376 68.9
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 6.0e-148 528.1 359 69.9
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 7.8e-148 527.7 384 66.7
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.7e-147 526.6 342 72.8
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 3.9e-147 525.4 340 73.5
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 8.6e-147 524.2 394 65.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.5e-146 522.7 379 67.0
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 2.5e-146 522.7 388 66.8
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 3.3e-146 522.3 376 66.5
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 3.3e-146 522.3 404 62.4
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 5.6e-146 521.5 354 68.9
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 7.3e-146 521.2 351 70.7
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 7.3e-146 521.2 358 69.3
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 9.5e-146 520.8 374 68.4
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 9.5e-146 520.8 362 68.2
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.2e-145 520.4 407 63.9
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.6e-145 520.0 354 69.2
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 1.6e-145 520.0 358 68.7
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.6e-145 520.0 358 68.7
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 2.8e-145 519.2 357 69.7
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.8e-145 519.2 407 63.6
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.6e-145 518.8 340 72.1
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 3.6e-145 518.8 390 63.6
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 4.7e-145 518.5 402 64.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.4e-144 516.9 354 69.2
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 1.4e-144 516.9 362 67.4
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.8e-144 516.5 378 65.1
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 3.1e-144 515.8 378 64.8
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 5.2e-144 515.0 406 62.8
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.2e-143 513.8 407 62.9
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.2e-143 513.8 357 67.2
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 1.5e-143 513.5 347 68.3
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.0e-143 513.1 309 78.3
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 2.6e-143 512.7 428 62.1
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 3.4e-143 512.3 389 64.3
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 4.4e-143 511.9 342 71.3
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 3.8e-142 508.8 390 64.1
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 3.8e-142 508.8 390 64.1
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 4.9e-142 508.4 346 70.8
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 6.4e-142 508.1 351 68.7
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.1e-141 507.3 367 67.3
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.4e-141 506.9 352 67.0
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 4.1e-141 505.4 429 60.6
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 9.2e-141 504.2 365 66.6
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 9.2e-141 504.2 361 66.5
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 9.2e-141 504.2 372 67.2
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 3.5e-140 502.3 362 67.1
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 3.5e-140 502.3 365 66.3
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 3.0e-139 499.2 392 63.5
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 3.9e-139 498.8 388 61.9
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 5.1e-139 498.4 374 65.2
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 5.1e-139 498.4 374 65.2
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 5.1e-139 498.4 365 66.6
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.8e-136 490.0 422 57.8
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 3.1e-136 489.2 317 70.7
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 2.6e-135 486.1 340 66.8
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.6e-135 486.1 353 64.6
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 4.4e-135 485.3 418 58.4
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 9.9e-135 484.2 405 59.8
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 2.9e-134 482.6 322 73.9
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 4.9e-134 481.9 321 71.7
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 1.9e-133 479.9 422 57.6
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 6.2e-129 464.9 347 64.8
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 5.3e-128 461.8 373 63.3
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 9.0e-128 461.1 341 62.2
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 5.6e-122 441.8 296 70.3
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 2.8e-121 439.5 349 62.5
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 3.8e-118 429.1 346 59.8
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 6.0e-116 421.8 280 73.6
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 2.7e-108 396.4 256 72.7
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 1.1e-106 391.0 351 53.8
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 3.3e-106 389.4 248 72.6
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 6.3e-105 385.2 283 69.3
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.4e-101 374.0 248 70.6
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.0e-99 367.9 305 60.3
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 8.2e-97 358.2 271 66.1
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 4.4e-90 335.9 378 46.0
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 1.1e-88 331.3 395 45.3
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 6.5e-86 322.0 239 64.0
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 9.4e-85 318.2 358 43.3
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 3.5e-71 273.1 342 42.4
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.3e-62 243.8 183 62.3
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 3.4e-42 176.8 126 63.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 4.4e-42 176.4 212 43.9
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.3e-38 164.9 158 55.1
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.6e-37 159.5 159 49.7
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.1e-36 155.6 91 76.9
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.5e-34 151.4 89 74.2
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.5e-29 132.1 106 56.6
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 3.6e-20 103.6 85 57.6
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 3.9e-14 83.6 93 48.4
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.5e-13 80.9 53 64.2
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 3.9e-06 57.0 75 40.0


User provided reference genes

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