Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 0.0e+00 1209.1 699 100.0
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 6.8e-301 1036.9 779 82.5
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 2.6e-284 981.9 702 84.9
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 8.4e-283 976.9 739 81.3
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 7.9e-281 970.3 739 80.9
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 8.2e-230 800.8 774 69.5
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 2.0e-215 753.1 741 65.6
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 7.3e-202 708.0 721 62.8
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 7.5e-199 698.0 741 60.9
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 5.0e-195 685.3 741 60.1
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 8.6e-195 684.5 743 61.6
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 1.2e-193 680.6 742 60.5
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 2.1e-193 679.9 742 60.8
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 1.8e-192 676.8 721 61.0
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 2.6e-191 672.9 745 59.5
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 1.7e-190 670.2 742 60.5
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 6.4e-190 668.3 785 58.3
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 1.4e-189 667.2 742 60.1
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 2.1e-188 663.3 738 59.5
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 4.6e-188 662.1 718 60.9
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 7.8e-188 661.4 741 59.2
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 1.3e-187 660.6 742 59.8
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 1.5e-186 657.1 743 59.2
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 3.3e-186 656.0 748 59.2
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 9.5e-186 654.4 723 60.0
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 1.2e-185 654.1 737 57.9
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 8.1e-185 651.4 756 58.6
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 1.1e-184 651.0 746 58.4
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 2.2e-182 643.3 740 58.4
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 2.2e-182 643.3 749 57.4
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 8.4e-182 641.3 741 58.3
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 2.4e-181 639.8 743 57.7
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 2.4e-181 639.8 742 56.6
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 4.6e-180 635.6 739 57.6
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 4.6e-180 635.6 739 57.1
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 6.0e-180 635.2 743 57.5
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 1.7e-179 633.6 741 57.9
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 4.0e-176 622.5 631 63.7
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 9.0e-176 621.3 742 56.5
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 1.2e-175 620.9 748 57.6
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 4.4e-175 619.0 745 56.1
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 5.8e-175 618.6 734 57.9
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 2.9e-174 616.3 739 57.0
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 4.9e-174 615.5 727 58.7
vmacro10859 Vaccinium macrocarpon HOM05D004485 ORTHO05D005485 6.4e-174 615.1 675 61.2
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 3.2e-173 612.8 753 55.9
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.1e-173 611.7 747 55.4
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 7.8e-172 608.2 749 56.5
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 1.5e-170 604.0 714 57.7
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 1.9e-170 603.6 753 55.9
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 4.3e-170 602.4 745 56.0
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 5.6e-170 602.1 755 56.2
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 5.6e-170 602.1 616 62.8
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 2.6e-167 593.2 752 54.3
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 1.1e-165 587.8 696 57.6
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 1.0e-163 581.3 745 53.6
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 3.9e-163 579.3 740 56.6
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 2.1e-161 573.5 748 53.2
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 2.8e-161 573.2 748 56.4
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 1.4e-160 570.9 750 53.1
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 1.4e-160 570.9 748 53.1
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 2.4e-160 570.1 740 55.7
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 2.4e-160 570.1 750 53.2
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 3.1e-160 569.7 740 55.9
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 3.1e-160 569.7 745 54.6
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 1.2e-159 567.8 716 54.9
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 6.0e-156 555.4 748 52.8
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 2.3e-155 553.5 744 52.0
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 1.9e-154 550.4 745 52.5
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 2.5e-154 550.1 746 52.9
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 5.6e-154 548.9 804 50.9
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 7.4e-154 548.5 735 54.6
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 3.7e-153 546.2 764 52.2
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 3.7e-153 546.2 770 50.8
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 5.3e-152 542.3 746 52.8
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 5.3e-152 542.3 732 53.3
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 2.9e-150 536.6 732 53.3
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 1.4e-149 534.3 742 50.5
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 1.4e-149 534.3 739 52.4
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 7.1e-149 531.9 752 51.9
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 5.1e-147 525.8 469 67.2
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 3.3e-146 523.1 744 50.1
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 2.6e-143 513.5 755 51.4
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 4.5e-143 512.7 755 51.3
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 1.0e-142 511.5 791 50.9
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 2.2e-142 510.4 752 50.5
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 5.0e-142 509.2 765 50.5
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 6.5e-142 508.8 755 51.0
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 9.4e-141 505.0 744 49.6
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 2.7e-140 503.4 758 48.4
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 1.8e-139 500.7 751 49.1
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 5.7e-138 495.7 745 49.5
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 3.1e-136 490.0 723 50.2
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 3.1e-136 490.0 746 49.7
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 2.9e-134 483.4 749 48.9
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 3.8e-134 483.0 748 49.1
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 5.5e-133 479.2 769 48.9
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 7.2e-133 478.8 747 48.3
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 4.7e-132 476.1 733 49.0
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 7.9e-132 475.3 388 73.7
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 1.0e-131 474.9 723 49.1
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 8.8e-131 471.9 749 46.1
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.8e-128 464.2 765 47.8
BcaC04g22803 Brassica carinata HOM05D004485 ORTHO05D005485 9.1e-128 461.8 640 52.2
Cc06_g10330 Coffea canephora HOM05D004485 ORTHO05D005485 1.2e-127 461.5 548 56.0
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 2.2e-126 457.2 736 46.9
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 4.2e-125 453.0 746 48.9
AUR62010900 Chenopodium quinoa HOM05D004485 ORTHO05D005485 2.7e-116 423.7 704 48.2
Hund29368 Selenicereus undatus HOM05D004485 ORTHO05D005485 3.5e-111 406.8 518 56.0
Hund29369 Selenicereus undatus HOM05D004485 ORTHO05D005485 2.9e-110 403.7 518 55.8
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 2.2e-105 387.5 457 57.3
Oeu064194.1 Olea europaea HOM05D004485 ORTHO05D005485 3.9e-94 350.1 455 54.3
Actinidia39786 Actinidia chinensis HOM05D004485 ORTHO05D005485 4.9e-89 333.2 459 51.6
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 2.0e-87 327.8 744 38.6
DCAR_012046 Daucus carota HOM05D004485 ORTHO05D005485 1.3e-73 282.0 410 51.0
Actinidia39785 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.7e-70 271.6 227 70.0
Cc06_g10340 Coffea canephora HOM05D004485 ORTHO05D005485 4.3e-69 266.9 187 79.7
Oeu064192.1 Olea europaea HOM05D004485 ORTHO05D005485 1.8e-67 261.5 240 68.8
CDE02G0772 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 5.2e-67 260.0 230 67.8
CBR_g39203 Chara braunii HOM05D004485 ORTHO05D005485 4.2e-64 250.4 457 41.1
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 1.5e-61 241.9 478 40.8
Hund28808 Selenicereus undatus HOM05D004485 ORTHO05D005485 4.8e-60 236.9 210 68.1
Hund28810 Selenicereus undatus HOM05D004485 ORTHO05D005485 4.8e-60 236.9 210 68.1
MBI07_g30871_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 1.3e-57 228.8 231 62.8
Cpa.g.sc40.63 Carica papaya HOM05D004485 ORTHO05D005485 9.3e-56 222.6 466 40.6
SHI02696 Sapria himalayana HOM05D004485 ORTHO05D005485 2.1e-47 194.9 421 41.8
Cpa.g.sc40.65 Carica papaya HOM05D004485 ORTHO05D005485 2.8e-44 184.5 136 77.2
SMO140G0037 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 2.0e-42 178.3 466 35.8
arahy.Tifrunner.gnm1.ann1.SL9UG3 Arachis hypogaea HOM05D004485 ORTHO05D005485 1.3e-41 175.6 291 46.7
Potri.006G164350 Populus trichocarpa HOM05D004485 ORTHO05D005485 1.1e-40 172.6 155 67.1
Sc08g0007940 Simmondsia chinensis HOM05D004485 ORTHO05D005485 2.5e-40 171.4 175 64.0
Rhsim05G0040800 Rhododendron simsii HOM05D000602 ORTHO05D001147 3.8e-25 120.9 197 48.2
SalBow3G4580 Salvia bowleyana HOM05D004485 ORTHO05D005485 8.5e-25 119.8 115 60.9
BcaC06g36663 Brassica carinata HOM05D004485 ORTHO05D005485 1.8e-22 112.1 243 38.7
PGR102G1041 Punica granatum HOM05D004485 ORTHO05D005485 3.1e-19 101.3 195 43.1
Cpa.g.sc40.64 Carica papaya HOM05D004485 ORTHO05D005485 2.1e-15 88.6 86 62.8
A07p00710 Brassica napus HOM05D004485 ORTHO05D005485 2.7e-15 88.2 111 55.9
C07p01440 Brassica napus HOM05D004485 ORTHO05D005485 1.2e-10 72.8 76 61.8
Cre12.g517500 Chlamydomonas reinhardtii HOM05D004485 ORTHO05D005485 1.5e-10 72.4 452 25.9
HPP92_005577 Vanilla planifolia HOM05D004485 ORTHO05D005485 7.7e-10 70.1 72 55.6
ATR0693G380 Amborella trichopoda HOM05D004485 ORTHO05D005485 1.1e-08 66.2 70 57.1
HanXRQChr10g0316161 Helianthus annuus HOM05D004485 ORTHO05D005485 2.7e-07 61.6 50 72.0
PRCOL_00000913 Prasinoderma coloniale HOM05D004485 ORTHO05D005485 2.7e-07 61.6 453 28.7
arahy.Tifrunner.gnm1.ann1.G8QSGL Arachis hypogaea HOM05D004485 ORTHO05D005485 3.6e-07 61.2 66 57.6
Gohir.D01G081701 Gossypium hirsutum HOM05D004485 ORTHO05D005485 6.7e-06 57.0 68 55.9
Gorai.003G091600 Gossypium raimondii HOM05D004485 ORTHO05D005485 8.8e-06 56.6 72 52.8


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