Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 8.7e-206 720.3 427 100.0
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 3.8e-169 598.6 438 82.9
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 8.6e-105 384.8 337 72.4
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 5.2e-94 349.0 347 63.7
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 1.9e-67 260.8 214 72.4
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.1e-54 218.4 371 44.5
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 1.4e-49 201.4 414 42.0
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 3.9e-49 199.9 390 42.8
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 1.5e-48 198.0 329 46.5
PGSC0003DMG400001447 Solanum tuberosum HOM05D005710 ORTHO05D004657 3.3e-48 196.8 230 58.3
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 5.7e-48 196.1 394 43.1
Sopen02g033380 Solanum pennellii HOM05D005710 ORTHO05D004657 3.7e-47 193.4 229 58.1
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 1.1e-46 191.8 379 43.3
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.2e-45 188.3 299 47.8
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.0e-45 187.6 394 41.9
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.0e-44 185.3 375 40.8
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 3.8e-44 183.3 418 39.2
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 1.1e-43 181.8 353 40.8
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.9e-43 181.0 399 40.6
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 7.2e-43 179.1 395 42.3
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 2.7e-42 177.2 387 39.3
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 1.0e-41 175.3 399 36.6
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.3e-41 174.1 366 40.7
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 5.1e-41 172.9 386 38.9
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 1.1e-40 171.8 401 36.7
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 1.5e-40 171.4 335 42.1
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 2.0e-40 171.0 404 38.4
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 3.3e-40 170.2 330 42.1
CAN.G206.216 Capsicum annuum HOM05D005710 ORTHO05D004657 2.8e-39 167.2 201 53.7
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 2.8e-39 167.2 393 36.9
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 3.7e-39 166.8 403 38.0
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.4e-38 164.9 357 36.7
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 3.1e-38 163.7 357 35.6
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 5.3e-38 162.9 425 36.5
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 7.0e-38 162.5 383 39.4
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 1.2e-37 161.8 407 36.6
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 3.5e-37 160.2 366 36.9
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 1.3e-36 158.3 413 35.1
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 1.3e-36 158.3 430 37.7
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 2.2e-36 157.5 370 40.3
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 2.2e-36 157.5 302 40.4
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 5.0e-36 156.4 380 39.5
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 5.5e-35 152.9 341 38.7
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.2e-35 152.5 393 36.9
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 9.4e-35 152.1 393 37.2
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 9.4e-35 152.1 411 36.0
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.2e-34 151.8 345 40.0
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 1.2e-34 151.8 378 36.0
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 2.1e-34 151.0 257 42.4
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 3.6e-34 150.2 399 36.1
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 2.3e-33 147.5 373 37.8
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 3.0e-33 147.1 349 39.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 3.9e-33 146.7 352 38.6
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 1.5e-32 144.8 357 38.1
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 1.5e-32 144.8 398 34.7
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 2.0e-32 144.4 402 35.6
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 2.0e-32 144.4 275 40.7
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 7.4e-32 142.5 400 33.8
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 9.7e-32 142.1 382 36.1
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.3e-31 141.7 288 41.0
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.2e-31 141.0 240 47.1
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.2e-31 141.0 240 47.1
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 4.8e-31 139.8 314 38.9
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 2.6e-29 134.0 360 35.3
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 5.9e-29 132.9 404 35.1
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 5.9e-29 132.9 242 42.1
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 7.7e-29 132.5 378 34.9
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 2.2e-28 131.0 286 37.4
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 2.9e-28 130.6 379 34.3
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 6.5e-28 129.4 390 34.6
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 6.5e-28 129.4 389 32.4
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 8.5e-28 129.0 132 56.8
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 1.1e-27 128.6 375 33.3
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 1.1e-27 128.6 369 33.9
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 1.5e-27 128.3 366 35.8
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 1.9e-27 127.9 390 33.3
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 3.2e-27 127.1 383 35.8
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 1.6e-26 124.8 236 40.3
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.6e-26 124.8 290 35.2
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 2.1e-26 124.4 332 38.0
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 2.1e-26 124.4 258 41.1
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 8.0e-26 122.5 309 35.3
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 5.2e-25 119.8 379 34.3
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 8.8e-25 119.0 261 39.1
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 2.0e-24 117.9 302 35.4
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 5.7e-24 116.3 343 34.4
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 5.7e-24 116.3 315 35.2
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 5.7e-24 116.3 315 35.2
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 1.7e-23 114.8 417 30.9
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 1.7e-23 114.8 417 30.9
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 2.2e-23 114.4 306 35.0
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 3.7e-23 113.6 193 42.5
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 6.3e-23 112.8 192 43.8
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 8.3e-23 112.5 255 37.3
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 8.3e-23 112.5 255 37.3
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 8.3e-23 112.5 407 32.7
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 4.1e-22 110.2 347 33.1
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 4.1e-22 110.2 347 33.1
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 9.1e-22 109.0 246 36.6
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 9.1e-22 109.0 259 35.5
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 9.1e-22 109.0 236 38.6
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 2.0e-21 107.8 282 34.4
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 3.5e-21 107.1 167 44.3
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 7.7e-21 105.9 280 34.3
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 1.0e-20 105.5 203 39.9
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 8.5e-20 102.4 259 37.8
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 3.2e-19 100.5 275 34.5
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 1.2e-18 98.6 203 37.4
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 1.8e-17 94.7 112 50.0
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 2.3e-17 94.4 350 31.4
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 3.0e-17 94.0 187 38.5
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 8.8e-17 92.4 165 40.6
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 1.2e-16 92.0 248 35.1
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 7.5e-16 89.4 183 37.7
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 5.4e-14 83.2 134 41.8
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 6.1e-10 69.7 270 30.0
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 1.5e-08 65.1 255 29.8
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 4.4e-08 63.5 188 34.0
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 1.7e-07 61.6 100 46.0
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 1.4e-06 58.5 215 28.8
C01p15530 Brassica napus HOM05D005186 ORTHO05D006278 5.4e-06 56.6 126 34.1
BolC1t01505H Brassica oleracea HOM05D005186 ORTHO05D006278 5.4e-06 56.6 126 34.1
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 5.4e-06 56.6 76 43.4
Sp2g25560 Schrenkiella parvula HOM05D005186 ORTHO05D006278 9.2e-06 55.8 126 34.1


User provided reference genes

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