Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.3e-248 862.4 699 100.0
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 9.1e-128 461.8 547 92.0
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 4.2e-117 426.4 293 74.1
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 5.7e-106 389.4 260 76.9
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 7.7e-103 379.0 259 77.2
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.3e-65 255.4 359 44.8
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 9.2e-64 249.2 268 50.4
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 1.6e-63 248.4 265 50.9
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.3e-62 245.4 299 50.2
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 8.7e-62 242.7 312 46.2
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 3.3e-61 240.7 268 51.5
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.6e-60 238.4 309 47.9
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 2.8e-60 237.7 302 46.4
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 6.2e-60 236.5 195 60.5
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 2.4e-59 234.6 308 45.8
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 5.3e-59 233.4 308 45.1
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 1.2e-58 232.3 294 46.3
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 1.5e-58 231.9 329 42.6
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 4.4e-58 230.3 518 46.7
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 7.6e-58 229.6 194 58.2
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 2.2e-57 228.0 175 68.0
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 2.9e-57 227.6 274 48.2
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.9e-57 227.6 259 50.6
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 3.8e-57 227.3 278 46.8
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.4e-56 225.3 302 46.0
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.4e-56 225.3 302 46.0
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 2.1e-55 221.5 264 48.5
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.3e-54 218.8 243 51.9
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 3.9e-54 217.2 314 44.6
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 5.1e-54 216.9 157 65.6
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.5e-53 215.3 218 53.2
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.9e-53 214.9 263 44.5
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 3.3e-53 214.2 243 48.1
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 4.3e-53 213.8 263 46.4
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 3.1e-51 207.6 240 47.5
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 4.0e-51 207.2 246 46.7
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 2.6e-50 204.5 230 52.6
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 7.6e-50 203.0 196 54.6
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 1.7e-49 201.8 194 52.1
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 8.4e-49 199.5 157 63.1
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 1.1e-48 199.1 200 52.0
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 1.9e-48 198.4 210 52.4
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 3.2e-48 197.6 304 41.4
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 7.1e-48 196.4 236 47.9
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 1.2e-47 195.7 257 44.4
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 2.7e-47 194.5 258 45.0
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 6.0e-47 193.4 216 48.1
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 7.9e-47 193.0 175 59.4
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 1.8e-46 191.8 253 43.1
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 5.1e-46 190.3 302 39.7
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 6.7e-46 189.9 207 48.3
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 1.9e-45 188.3 205 50.2
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 5.6e-45 186.8 126 84.9
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 8.1e-44 183.0 219 49.8
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 2.0e-42 178.3 235 43.0
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 2.6e-42 177.9 247 44.1
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 3.4e-42 177.6 171 56.7
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 2.2e-41 174.9 232 43.5
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.2e-39 169.1 175 50.9
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 2.1e-39 168.3 175 51.4
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 2.1e-39 168.3 175 51.4
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 2.7e-39 167.9 175 49.7
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.5e-39 167.5 175 49.7
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 7.9e-39 166.4 132 65.2
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 7.9e-39 166.4 254 41.7
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 1.1e-37 162.5 175 47.4
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 4.3e-37 160.6 130 58.5
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 9.6e-37 159.5 271 38.7
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.6e-36 158.7 172 49.4
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 2.8e-36 157.9 148 54.7
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 1.4e-35 155.6 191 42.9
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 1.8e-35 155.2 309 36.6
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 3.1e-35 154.5 244 40.2
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.1e-32 146.0 133 55.6
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.1e-32 146.0 133 55.6
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.7e-31 141.4 114 59.6
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 2.2e-28 131.7 145 52.4
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 3.8e-25 120.9 128 47.7
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 4.2e-24 117.5 144 45.8
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 1.7e-20 105.5 119 46.2
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 2.2e-20 105.1 89 53.9
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 2.8e-20 104.8 88 54.5
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 5.3e-19 100.5 115 45.2
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 9.1e-19 99.8 80 56.2
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.5e-18 99.0 88 54.5
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.7e-17 95.5 165 36.4
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 1.7e-17 95.5 89 51.7
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.4e-16 92.4 69 58.0
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.9e-16 92.0 76 56.6
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 1.6e-15 89.0 86 48.8
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.5e-08 65.9 65 50.8
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 1.9e-08 65.5 119 37.0
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.2e-07 62.8 231 25.5
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.6e-07 62.4 120 37.5
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.1e-07 62.0 227 25.6
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 8.8e-06 56.6 101 33.7


User provided reference genes

Program Settings