Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 6.5e-45 183.7 95 100.0
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.2e-35 152.9 80 95.0
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 1.8e-34 149.1 80 92.5
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 1.8e-34 149.1 80 92.5
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 1.3e-32 142.9 80 86.2
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 9.1e-23 110.2 67 79.1
PGSC0003DMG400029826 Solanum tuberosum HOM05D007721 ORTHO05D009811 3.8e-21 104.8 73 78.1
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 2.1e-19 99.0 70 65.7
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 2.1e-19 99.0 66 69.7
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 4.7e-19 97.8 76 65.8
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 6.1e-19 97.4 67 67.2
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.4e-18 96.3 59 72.9
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 1.8e-18 95.9 66 69.7
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 2.3e-18 95.5 66 69.7
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 3.0e-18 95.1 70 64.3
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 4.0e-18 94.7 67 65.7
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 5.2e-18 94.4 66 68.2
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 8.8e-18 93.6 69 60.9
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 1.2e-17 93.2 66 68.2
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 2.6e-17 92.0 66 66.7
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 3.4e-17 91.7 66 68.2
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 4.4e-17 91.3 79 60.8
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 5.7e-17 90.9 66 66.7
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 9.8e-17 90.1 66 63.6
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 1.3e-16 89.7 66 59.1
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 1.7e-16 89.4 66 66.7
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 1.7e-16 89.4 69 62.3
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 2.2e-16 89.0 65 64.6
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 3.7e-16 88.2 65 64.6
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 6.3e-16 87.4 66 62.1
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 6.3e-16 87.4 66 63.6
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 6.3e-16 87.4 66 63.6
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 8.3e-16 87.0 59 71.2
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 1.1e-15 86.7 70 55.7
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 1.4e-15 86.3 66 60.6
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 1.4e-15 86.3 70 55.7
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 1.4e-15 86.3 71 57.7
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 1.4e-15 86.3 76 53.9
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 1.4e-15 86.3 59 71.2
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 2.4e-15 85.5 69 60.9
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 4.1e-15 84.7 69 55.1
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 7.0e-15 84.0 69 58.0
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 9.1e-15 83.6 63 61.9
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 9.1e-15 83.6 80 53.8
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 1.2e-14 83.2 59 64.4
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 1.2e-14 83.2 66 59.1
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 1.6e-14 82.8 66 59.1
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 1.6e-14 82.8 63 73.0
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 2.0e-14 82.4 77 55.8
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 4.5e-14 81.3 66 56.1
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 7.7e-14 80.5 55 74.5
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 1.7e-13 79.3 69 52.2
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 1.7e-13 79.3 70 54.3
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 2.3e-13 79.0 69 52.2
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 2.9e-13 78.6 66 59.1
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 3.8e-13 78.2 66 54.5
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 3.8e-13 78.2 66 54.5
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 3.8e-13 78.2 69 53.6
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 6.5e-13 77.4 69 52.2
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 1.5e-12 76.3 69 53.6
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 2.5e-12 75.5 65 55.4
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 2.5e-12 75.5 72 51.4
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 4.2e-12 74.7 48 70.8
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 4.2e-12 74.7 48 70.8
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 4.2e-12 74.7 67 53.7
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 5.5e-12 74.3 66 54.5
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 9.5e-12 73.6 70 51.4
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 1.2e-11 73.2 67 52.2
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.2e-11 73.2 66 54.5
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 2.8e-11 72.0 72 48.6
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 3.6e-11 71.6 67 52.2
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 4.7e-11 71.2 67 50.7
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 4.7e-11 71.2 67 52.2
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 6.1e-11 70.9 67 50.7
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 2.3e-10 68.9 67 50.7
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 4.0e-10 68.2 67 49.3
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 2.2e-08 62.4 67 50.7
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 1.4e-07 59.7 66 42.4
DCAR_024676 Daucus carota HOM05D007721 ORTHO05D009811 4.1e-07 58.2 61 49.2
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 1.2e-06 56.6 66 43.9
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 3.5e-06 55.1 42 59.5


User provided reference genes

Program Settings