Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.5e-214 749.2 363 100.0
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 7.0e-164 580.9 387 76.7
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.5e-150 536.6 363 76.0
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 6.8e-135 484.6 362 68.2
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.3e-133 480.3 358 68.7
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 1.8e-132 476.5 385 63.9
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.8e-132 476.5 359 67.7
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 2.4e-132 476.1 359 67.7
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 4.6e-131 471.9 357 66.1
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 4.6e-131 471.9 360 67.8
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 6.0e-131 471.5 359 67.1
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 3.0e-130 469.2 359 65.7
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 3.3e-129 465.7 360 67.2
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 3.3e-129 465.7 360 65.6
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 3.3e-129 465.7 354 65.5
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 9.5e-129 464.2 358 66.5
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 1.2e-128 463.8 357 66.1
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 3.6e-128 462.2 356 68.0
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 6.2e-128 461.5 371 65.2
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 1.4e-127 460.3 359 65.2
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 5.2e-127 458.4 360 65.0
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 4.4e-126 455.3 361 63.7
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 7.5e-126 454.5 388 62.1
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 7.5e-126 454.5 365 63.6
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 9.8e-126 454.1 357 64.4
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 1.3e-125 453.8 364 63.7
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 2.2e-125 453.0 357 64.7
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 1.7e-122 443.4 357 63.6
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 3.0e-122 442.6 362 63.3
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 3.9e-122 442.2 337 66.2
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 6.6e-122 441.4 385 62.9
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 5.6e-121 438.3 359 64.3
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 1.2e-120 437.2 358 61.5
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 1.2e-120 437.2 357 62.7
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 2.8e-120 436.0 357 62.7
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 8.1e-120 434.5 354 61.0
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 4.0e-119 432.2 358 61.5
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 1.5e-118 430.3 358 63.1
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 2.0e-118 429.9 356 61.8
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 3.4e-118 429.1 359 61.8
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 3.4e-118 429.1 358 60.6
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 4.4e-118 428.7 364 61.3
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 5.8e-118 428.3 357 61.3
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 7.5e-118 427.9 358 62.0
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 9.9e-118 427.6 354 61.6
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.3e-117 427.2 362 61.0
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 2.9e-117 426.0 357 60.5
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 2.9e-117 426.0 354 60.2
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 6.4e-117 424.9 358 60.3
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 1.1e-116 424.1 358 60.3
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 1.4e-116 423.7 355 61.4
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 1.9e-116 423.3 356 58.7
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 3.2e-116 422.5 354 59.9
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 3.2e-116 422.5 359 61.6
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 3.2e-116 422.5 361 59.8
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 4.1e-116 422.2 359 60.7
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 5.4e-116 421.8 355 60.0
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 1.6e-115 420.2 360 60.8
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 2.1e-115 419.9 361 59.8
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 2.7e-115 419.5 358 59.8
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.7e-115 419.5 355 61.1
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 3.5e-115 419.1 356 60.7
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 3.5e-115 419.1 354 61.0
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 4.6e-115 418.7 356 61.2
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 4.6e-115 418.7 367 58.6
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 4.6e-115 418.7 357 59.1
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 6.0e-115 418.3 358 59.8
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 6.0e-115 418.3 358 59.8
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 6.0e-115 418.3 359 59.9
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 6.0e-115 418.3 356 61.0
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 1.0e-114 417.5 356 59.6
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 1.0e-114 417.5 357 59.9
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 1.0e-114 417.5 357 58.0
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 1.3e-114 417.2 355 61.1
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 1.3e-114 417.2 359 59.9
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 3.9e-114 415.6 364 60.7
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 5.1e-114 415.2 353 61.2
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 5.1e-114 415.2 356 59.0
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 6.6e-114 414.8 359 58.8
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 6.6e-114 414.8 355 60.8
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 8.6e-114 414.5 367 56.7
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 1.5e-113 413.7 359 59.1
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 3.3e-113 412.5 356 57.9
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 5.6e-113 411.8 341 65.1
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 5.6e-113 411.8 356 57.9
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 1.2e-112 410.6 337 60.2
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.2e-112 410.6 359 57.4
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 2.8e-112 409.5 357 59.4
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.7e-112 408.7 388 58.0
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 6.2e-112 408.3 359 59.6
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 8.1e-112 407.9 361 56.8
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 1.4e-111 407.1 358 59.2
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 1.2e-110 404.1 355 58.3
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.5e-110 403.7 359 57.7
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 3.4e-110 402.5 359 57.4
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 4.4e-110 402.1 341 60.4
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.3e-109 400.6 379 57.8
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 1.3e-109 400.6 357 58.0
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 1.7e-109 400.2 357 57.4
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 8.4e-109 397.9 360 60.6
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.1e-108 397.5 391 56.8
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 1.9e-108 396.7 317 62.8
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 7.1e-108 394.8 358 57.3
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 2.1e-107 393.3 357 59.4
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 2.1e-107 393.3 425 52.9
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 1.0e-106 391.0 363 57.9
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.3e-106 390.6 504 47.4
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 2.3e-106 389.8 355 58.6
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 2.3e-106 389.8 307 62.2
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 3.9e-106 389.0 556 43.2
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 5.1e-106 388.7 363 58.1
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.5e-105 387.1 369 55.0
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 1.5e-102 377.1 278 66.9
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 2.0e-102 376.7 388 54.9
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 4.6e-99 365.5 353 53.3
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 1.3e-98 364.0 402 49.5
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 1.1e-97 360.9 356 56.5
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 1.4e-95 354.0 358 50.8
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 3.2e-92 342.8 306 57.8
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 5.4e-92 342.0 384 49.0
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 4.6e-91 339.0 374 50.3
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 1.9e-89 333.6 312 57.7
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 7.6e-86 321.6 240 69.6
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.9e-85 319.7 356 49.4
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 2.4e-84 316.6 412 46.6
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 2.1e-83 313.5 236 66.5
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 5.1e-82 308.9 359 49.3
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 3.4e-78 296.2 377 43.5
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 4.5e-78 295.8 361 44.0
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.0e-77 294.7 383 45.2
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 4.9e-77 292.4 240 60.0
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 3.2e-76 289.7 354 46.0
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 2.3e-74 283.5 248 55.6
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 1.5e-73 280.8 292 52.7
FAN10G0821 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.9e-73 280.4 354 48.0
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 2.5e-73 280.0 239 60.3
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 2.5e-73 280.0 244 58.6
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 1.4e-71 274.2 200 69.0
Ciclev10032311m.g Citrus clementina HOM05D004534 ORTHO05D005413 5.3e-71 272.3 290 55.9
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 5.5e-68 262.3 538 34.6
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 9.4e-68 261.5 359 44.0
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 1.1e-65 254.6 209 62.2
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 3.1e-63 246.5 172 72.7
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 7.7e-54 215.3 269 46.1
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 2.6e-49 200.3 293 41.3
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 5.7e-49 199.1 187 50.8
Cre01.g013250 Chlamydomonas reinhardtii HOM05D004534 ORTHO05D005413 6.8e-34 149.1 337 28.5
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.2e-33 148.3 379 30.3
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 1.2e-33 148.3 351 30.5
Cc09_g02400 Coffea canephora HOM05D004534 ORTHO05D005413 1.5e-33 147.9 128 61.7
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 5.7e-25 119.4 121 50.4
Nitab4.5_0000830g0070 Nicotiana tabacum HOM05D004534 ORTHO05D005413 5.9e-22 109.4 110 56.4
VMungo0464G2039 Vigna mungo HOM05D004534 ORTHO05D005413 5.9e-22 109.4 97 52.6
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 5.6e-20 102.8 89 57.3
Glyma.15G044000 Glycine max HOM05D004534 ORTHO05D005413 2.0e-17 94.4 82 54.9
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 1.1e-15 88.6 56 73.2
RcHm_v2.0_Chr5g0046071 Rosa chinensis HOM05D004534 ORTHO05D005413 7.3e-12 75.9 49 73.5
Actinidia38238 Actinidia chinensis HOM05D004534 ORTHO05D005413 9.8e-09 65.5 136 34.6
AagrBONN_evm.TU.Sc2ySwM_117.2640 Anthoceros agrestis HOM05D012537 ORTHO05D009535 1.9e-07 61.2 36 72.2


User provided reference genes

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