Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 4.9e-97 357.8 186 100.0
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.4e-88 329.7 186 94.6
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 1.4e-75 286.6 181 82.9
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 4.2e-72 275.0 183 77.0
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 9.3e-72 273.9 182 76.4
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 7.9e-71 270.8 183 74.9
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 3.0e-70 268.9 181 76.2
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 6.7e-70 267.7 181 74.0
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 5.7e-69 264.6 184 72.3
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.8e-68 262.3 184 73.4
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 8.2e-68 260.8 185 71.9
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 8.2e-68 260.8 180 72.8
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 1.1e-67 260.4 182 74.2
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 1.4e-67 260.0 181 73.5
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 3.1e-67 258.8 181 74.0
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 5.3e-67 258.1 140 94.3
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 6.9e-67 257.7 185 71.4
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 9.0e-67 257.3 180 71.7
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.2e-66 256.9 184 70.7
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 2.0e-66 256.1 180 73.3
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.6e-66 255.8 198 68.7
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 3.4e-66 255.4 186 70.4
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 1.0e-65 253.8 180 70.6
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 6.5e-65 251.1 184 69.0
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 6.5e-65 251.1 177 72.3
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 8.5e-65 250.8 185 68.6
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 1.9e-64 249.6 186 66.7
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 2.5e-64 249.2 177 72.3
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 5.5e-64 248.1 181 69.6
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 9.4e-64 247.3 181 68.0
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.2e-63 246.9 184 67.4
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 1.6e-63 246.5 176 71.0
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 2.7e-63 245.7 178 69.7
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 1.0e-62 243.8 178 68.5
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 1.0e-62 243.8 182 65.9
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.3e-62 242.7 196 64.3
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 2.3e-62 242.7 184 65.2
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 2.3e-62 242.7 182 64.8
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 5.1e-62 241.5 185 67.0
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.0e-61 239.6 177 69.5
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 2.5e-61 239.2 182 64.3
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 7.4e-61 237.7 181 67.4
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 7.4e-61 237.7 186 66.1
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 9.7e-61 237.3 187 65.2
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.7e-60 236.5 186 66.1
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 3.7e-60 235.3 174 68.4
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 3.7e-60 235.3 183 65.6
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 3.7e-60 235.3 181 65.7
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 4.8e-60 235.0 186 65.6
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 8.2e-60 234.2 180 64.4
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 1.8e-59 233.0 181 65.7
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 4.1e-59 231.9 179 67.6
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 5.3e-59 231.5 182 64.8
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 9.1e-59 230.7 186 65.1
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 1.2e-58 230.3 180 67.8
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 1.5e-58 229.9 179 62.6
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 2.0e-58 229.6 186 64.0
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 2.0e-58 229.6 186 64.5
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.6e-58 229.2 181 66.3
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 4.5e-58 228.4 172 68.0
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.0e-57 227.3 176 66.5
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 1.7e-57 226.5 173 67.6
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 5.0e-57 224.9 186 62.9
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 1.9e-56 223.0 172 68.6
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 3.2e-56 222.2 187 63.1
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 3.2e-56 222.2 187 63.1
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 4.2e-56 221.9 181 64.1
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 5.5e-56 221.5 172 63.4
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 5.5e-56 221.5 212 57.5
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 1.2e-55 220.3 186 62.4
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.2e-55 220.3 187 62.6
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.2e-55 220.3 187 62.6
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 6.1e-55 218.0 177 61.6
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 1.0e-54 217.2 173 61.8
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 1.4e-54 216.9 174 61.5
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 6.7e-54 214.5 174 64.4
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 8.8e-54 214.2 149 72.5
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 2.6e-53 212.6 261 49.8
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 5.7e-53 211.5 169 63.3
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 9.7e-53 210.7 173 63.6
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.2e-52 209.5 182 57.1
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 4.8e-52 208.4 153 68.6
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 4.8e-52 208.4 148 71.6
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 8.2e-52 207.6 149 69.8
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 8.2e-52 207.6 140 71.4
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 9.1e-51 204.1 174 61.5
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 1.3e-49 200.3 175 60.6
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 1.2e-47 193.7 142 69.7
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 2.7e-47 192.6 181 55.8
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 4.7e-47 191.8 118 77.1
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 1.4e-46 190.3 184 57.1
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 8.8e-46 187.6 195 52.3
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 1.5e-45 186.8 175 53.1
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 5.7e-45 184.9 124 75.8
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 1.7e-44 183.3 138 65.9
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 2.2e-41 172.9 145 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 6.7e-38 161.4 177 44.1
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 8.8e-38 161.0 123 64.2
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 7.5e-37 157.9 184 46.2
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 9.7e-37 157.5 177 44.1
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 2.4e-35 152.9 145 60.0
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 2.9e-33 146.0 144 52.8
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 2.4e-27 126.3 88 65.9
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 2.7e-26 122.9 163 39.3
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.3e-25 120.6 118 50.8
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 6.1e-15 85.1 64 73.4
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.4e-14 84.0 70 58.6
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.0e-13 80.1 43 88.4
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 2.7e-10 69.7 150 30.0
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.3e-09 66.6 55 70.9
Medtr1g051110 Medicago truncatula HOM05D001420 ORTHO05D009292 4.3e-08 62.4 72 48.6
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 5.6e-08 62.0 97 42.3


User provided reference genes

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