Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.0e-160 569.3 348 100.0
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.6e-136 489.2 351 89.2
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 4.9e-82 308.9 360 65.6
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 1.1e-81 307.8 345 68.1
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 1.1e-62 244.6 374 42.5
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 5.8e-59 232.3 379 40.1
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 2.9e-58 229.9 380 46.6
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 1.8e-55 220.7 316 57.9
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 2.3e-55 220.3 388 39.7
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 6.7e-55 218.8 372 48.1
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 6.7e-55 218.8 386 40.7
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 8.7e-55 218.4 375 39.5
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.1e-54 218.0 360 41.7
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 4.3e-54 216.1 406 39.4
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 4.3e-54 216.1 364 47.0
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 1.3e-53 214.5 370 45.1
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 1.4e-52 211.1 364 40.4
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 2.4e-52 210.3 363 52.1
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 2.4e-52 210.3 390 41.0
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 5.3e-52 209.1 382 37.4
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 1.5e-51 207.6 368 47.8
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 2.6e-51 206.8 373 37.8
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.0e-50 204.9 370 39.5
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 2.9e-50 203.4 365 46.0
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 8.4e-50 201.8 366 39.3
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 1.1e-49 201.4 391 41.9
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 1.4e-49 201.1 414 36.5
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 1.4e-49 201.1 390 41.3
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 2.5e-49 200.3 389 36.0
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 5.5e-49 199.1 390 41.0
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 7.1e-49 198.7 365 44.1
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 4.6e-48 196.1 363 38.8
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 1.0e-47 194.9 390 36.4
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 1.3e-47 194.5 380 37.1
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.3e-47 194.5 356 36.2
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 1.8e-47 194.1 389 38.6
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.3e-47 193.7 377 43.0
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 3.9e-47 193.0 356 36.0
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 5.1e-47 192.6 356 37.1
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.5e-46 190.3 356 36.2
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 4.3e-46 189.5 369 39.0
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 5.7e-46 189.1 370 35.9
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 5.7e-46 189.1 359 38.2
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 5.7e-46 189.1 358 36.3
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 7.4e-46 188.7 390 35.6
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 7.4e-46 188.7 390 35.6
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 1.1e-44 184.9 375 44.3
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 5.3e-44 182.6 362 37.8
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.2e-43 181.4 343 38.5
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.2e-43 181.4 382 38.7
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 1.2e-43 181.4 379 35.1
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.5e-43 181.0 343 38.5
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 3.4e-43 179.9 390 39.7
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 4.5e-43 179.5 422 37.7
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 5.9e-43 179.1 356 37.9
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 5.9e-43 179.1 374 36.9
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 5.9e-43 179.1 373 35.7
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 2.2e-42 177.2 361 35.7
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 2.2e-42 177.2 354 39.8
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 3.8e-42 176.4 356 37.6
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 1.4e-41 174.5 392 34.4
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 1.9e-41 174.1 128 67.2
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 2.5e-41 173.7 381 38.6
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 3.2e-41 173.3 364 38.7
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 3.2e-41 173.3 377 36.3
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 4.2e-41 172.9 365 35.6
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 9.3e-41 171.8 387 36.7
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 9.3e-41 171.8 377 35.0
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 1.2e-40 171.4 348 40.2
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.6e-40 171.0 372 33.1
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 2.7e-40 170.2 355 37.2
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 3.6e-40 169.9 349 39.3
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 6.1e-40 169.1 349 39.3
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 1.8e-39 167.5 365 37.3
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 2.3e-39 167.2 424 32.8
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 5.1e-39 166.0 175 56.0
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 1.5e-38 164.5 354 34.5
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 2.5e-38 163.7 348 35.1
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 1.6e-37 161.0 129 62.8
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 1.6e-37 161.0 387 34.6
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 1.6e-37 161.0 122 67.2
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 2.2e-37 160.6 192 52.1
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 2.2e-37 160.6 110 69.1
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 2.8e-37 160.2 192 52.1
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 3.7e-37 159.8 155 57.4
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 3.7e-37 159.8 179 55.3
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 4.8e-37 159.5 369 33.1
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 8.2e-37 158.7 339 33.0
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 1.1e-36 158.3 388 40.2
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 2.4e-36 157.1 134 59.7
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 2.0e-35 154.1 350 36.6
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 3.4e-35 153.3 340 40.3
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.8e-34 149.8 120 57.5
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 1.1e-33 148.3 120 56.7
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 1.9e-33 147.5 157 52.9
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.9e-33 147.5 165 49.1
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 5.5e-33 146.0 172 52.9
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 2.7e-32 143.7 345 34.5
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 4.6e-32 142.9 134 58.2
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 6.1e-32 142.5 180 44.4
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 6.1e-32 142.5 135 55.6
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 7.9e-32 142.1 156 53.2
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.4e-31 141.4 320 32.8
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.4e-31 141.4 320 32.8
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.8e-31 141.0 354 32.2
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 2.3e-31 140.6 359 34.0
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 8.8e-31 138.7 174 49.4
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 8.8e-31 138.7 369 33.9
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 1.1e-30 138.3 487 27.7
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 2.0e-30 137.5 364 29.9
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 2.0e-30 137.5 145 49.0
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.0e-30 137.5 368 32.3
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 2.6e-30 137.1 170 48.2
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 3.3e-30 136.7 113 59.3
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 4.4e-30 136.3 195 43.1
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 7.4e-30 135.6 141 53.2
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 7.4e-30 135.6 116 59.5
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 7.4e-30 135.6 116 59.5
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 9.7e-30 135.2 120 55.0
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.3e-29 134.8 363 31.4
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 1.7e-29 134.4 177 48.6
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 6.3e-29 132.5 163 46.6
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 6.3e-29 132.5 163 46.6
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 6.3e-29 132.5 374 30.7
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 8.2e-29 132.1 158 51.3
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.4e-28 131.3 111 61.3
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.4e-28 131.3 111 61.3
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 1.4e-28 131.3 133 55.6
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 1.4e-28 131.3 133 55.6
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 1.4e-28 131.3 133 55.6
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 2.4e-28 130.6 162 49.4
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 4.1e-28 129.8 155 50.3
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 4.1e-28 129.8 155 50.3
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 6.9e-28 129.0 348 31.9
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 6.9e-28 129.0 116 58.6
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 6.9e-28 129.0 116 58.6
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 6.9e-28 129.0 116 58.6
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 9.1e-28 128.6 107 57.9
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 1.5e-27 127.9 349 30.9
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 3.4e-27 126.7 357 30.3
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 1.0e-26 125.2 105 61.0
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 1.3e-26 124.8 360 34.2
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 2.9e-26 123.6 149 51.0
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 1.4e-25 121.3 71 88.7
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 4.2e-25 119.8 187 43.3
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 1.6e-24 117.9 127 52.0
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 2.1e-24 117.5 188 39.9
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 4.7e-24 116.3 71 83.1
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 5.2e-23 112.8 131 43.5
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 6.7e-23 112.5 174 43.1
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 8.8e-23 112.1 157 45.9
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 3.3e-22 110.2 168 41.7
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 7.4e-22 109.0 148 45.9
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 7.4e-22 109.0 106 46.2
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 4.8e-21 106.3 154 44.2
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 8.2e-21 105.5 159 45.3
Zm00001eb366050 Zea mays HOM05D003874 ORTHO05D004545 1.1e-20 105.1 162 36.4
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 2.4e-20 104.0 135 48.1
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 2.4e-20 104.0 377 28.4
Glyma.04G111000 Glycine max HOM05D003874 ORTHO05D004545 4.1e-20 103.2 107 52.3
Zm00001eb145550 Zea mays HOM05D003874 ORTHO05D004545 2.9e-18 97.1 165 38.2
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 1.2e-16 91.7 144 34.0
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 2.1e-16 90.9 351 31.9
SEGI_28614 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 3.6e-16 90.1 159 40.3
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 6.1e-16 89.4 165 41.8
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 1.6e-11 74.7 112 41.1
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 1.7e-10 71.2 171 30.4
Nn4g22326 Nelumbo nucifera HOM05D003874 ORTHO05D004545 6.5e-10 69.3 41 80.5
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 1.4e-07 61.6 110 33.6
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 2.0e-06 57.8 95 35.8


User provided reference genes

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